RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 MRPL50Q8N5N7 158 aaKnown RBP17.21■□□□□ 0.35
SMARCD3-211ENST00000485592 WDR66Q8TBY9 1149 aa17.21■□□□□ 0.35
SMARCD3-211ENST00000485592 AK9Q5TCS8 1911 aa17.21■□□□□ 0.35
SMARCD3-211ENST00000485592 PRMT2P55345 433 aa17.2■□□□□ 0.34
SMARCD3-211ENST00000485592 PPATQ06203 517 aa17.2■□□□□ 0.34
SMARCD3-211ENST00000485592 MKI67P46013 3256 aaKnown RBP17.19■□□□□ 0.34
SMARCD3-211ENST00000485592 MYCP01106 439 aaPredicted RBP17.19■□□□□ 0.34
SMARCD3-211ENST00000485592 FGFR2P21802 821 aa17.19■□□□□ 0.34
SMARCD3-211ENST00000485592 MIGA2Q7L4E1 593 aa17.19■□□□□ 0.34
SMARCD3-211ENST00000485592 LPIN2Q92539 896 aa17.19■□□□□ 0.34
SMARCD3-211ENST00000485592 ARHGAP39Q9C0H5 1083 aa17.19■□□□□ 0.34
SMARCD3-211ENST00000485592 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.18■□□□□ 0.34
SMARCD3-211ENST00000485592 SH3TC2Q8TF17 1288 aa17.18■□□□□ 0.34
SMARCD3-211ENST00000485592 FAM151AQ8WW52 585 aa17.18■□□□□ 0.34
SMARCD3-211ENST00000485592 USP44Q9H0E7 712 aa17.18■□□□□ 0.34
SMARCD3-211ENST00000485592 ZNF521Q96K83 1311 aa17.18■□□□□ 0.34
SMARCD3-211ENST00000485592 EYA2O00167 538 aa17.17■□□□□ 0.34
SMARCD3-211ENST00000485592 INPP5BP32019 993 aa17.17■□□□□ 0.34
SMARCD3-211ENST00000485592 ANKRD23Q86SG2 305 aa17.17■□□□□ 0.34
SMARCD3-211ENST00000485592 HOXD10P28358 340 aa17.16■□□□□ 0.34
SMARCD3-211ENST00000485592 TCP10Q12799 353 aa17.16■□□□□ 0.34
SMARCD3-211ENST00000485592 C17orf99Q6UX52 265 aa17.16■□□□□ 0.34
SMARCD3-211ENST00000485592 CPA4Q9UI42 421 aa17.16■□□□□ 0.34
SMARCD3-211ENST00000485592 DAGLAQ9Y4D2 1042 aa17.16■□□□□ 0.34
SMARCD3-211ENST00000485592 BRCA2P51587 3418 aa17.15■□□□□ 0.34
SMARCD3-211ENST00000485592 E9PSI1 815 aa17.15■□□□□ 0.34
SMARCD3-211ENST00000485592 PDHXO00330 501 aa17.15■□□□□ 0.34
SMARCD3-211ENST00000485592 ECM2O94769 699 aaPredicted RBP17.15■□□□□ 0.34
SMARCD3-211ENST00000485592 CDC42EP5Q6NZY7 148 aa17.15■□□□□ 0.34
SMARCD3-211ENST00000485592 SSH1Q8WYL5 1049 aa17.15■□□□□ 0.34
SMARCD3-211ENST00000485592 GNL3LQ9NVN8 582 aaKnown RBP17.15■□□□□ 0.34
SMARCD3-211ENST00000485592 KCNH4Q9UQ05 1017 aa17.15■□□□□ 0.34
SMARCD3-211ENST00000485592 DOCK2Q92608 1830 aa17.14■□□□□ 0.34
SMARCD3-211ENST00000485592 LDHBP07195 334 aaKnown RBP17.14■□□□□ 0.33
SMARCD3-211ENST00000485592 PRDX5P30044 214 aa17.14■□□□□ 0.33
SMARCD3-211ENST00000485592 PSMC4P43686 418 aa17.14■□□□□ 0.33
SMARCD3-211ENST00000485592 RFX5P48382 616 aaPredicted RBP17.14■□□□□ 0.33
SMARCD3-211ENST00000485592 DIXDC1Q155Q3 683 aa17.14■□□□□ 0.33
SMARCD3-211ENST00000485592 NOL9Q5SY16 702 aaKnown RBP17.14■□□□□ 0.33
SMARCD3-211ENST00000485592 RAET1EQ8TD07 263 aa17.14■□□□□ 0.33
SMARCD3-211ENST00000485592 SRRDQ9UH36 339 aa17.14■□□□□ 0.33
SMARCD3-211ENST00000485592 ZNF112Q9UJU3 913 aa17.14■□□□□ 0.33
SMARCD3-211ENST00000485592 FBXO3Q9UK99 471 aa17.14■□□□□ 0.33
SMARCD3-211ENST00000485592 FMNL1O95466 1100 aaPredicted RBP17.13■□□□□ 0.33
SMARCD3-211ENST00000485592 NFIAQ12857 509 aa17.13■□□□□ 0.33
SMARCD3-211ENST00000485592 ATP2B3Q16720 1220 aa17.13■□□□□ 0.33
SMARCD3-211ENST00000485592 PARK7Q99497 189 aaKnown RBP17.13■□□□□ 0.33
SMARCD3-211ENST00000485592 CEP126Q9P2H0 1117 aa17.13■□□□□ 0.33
SMARCD3-211ENST00000485592 CIAO1O76071 339 aa17.12■□□□□ 0.33
SMARCD3-211ENST00000485592 UBTFL1P0CB47 393 aaPredicted RBP17.12■□□□□ 0.33
SMARCD3-211ENST00000485592 OSBPP22059 807 aa17.12■□□□□ 0.33
SMARCD3-211ENST00000485592 FXR1P51114 621 aaKnown RBP eCLIP17.12■□□□□ 0.33
SMARCD3-211ENST00000485592 ALDH1L2Q3SY69 923 aa17.12■□□□□ 0.33
SMARCD3-211ENST00000485592 ATG9AQ7Z3C6 839 aa17.12■□□□□ 0.33
SMARCD3-211ENST00000485592 NKX2-3Q8TAU0 364 aa17.12■□□□□ 0.33
SMARCD3-211ENST00000485592 TRIM47Q96LD4 638 aa17.12■□□□□ 0.33
SMARCD3-211ENST00000485592 SIL1Q9H173 461 aa17.12■□□□□ 0.33
SMARCD3-211ENST00000485592 USP40Q9NVE5 1235 aa17.12■□□□□ 0.33
SMARCD3-211ENST00000485592 DENND2AQ9ULE3 1009 aa17.12■□□□□ 0.33
SMARCD3-211ENST00000485592 COLQQ9Y215 455 aaPredicted RBP17.12■□□□□ 0.33
SMARCD3-211ENST00000485592 MYPNQ86TC9 1320 aa17.12■□□□□ 0.33
SMARCD3-211ENST00000485592 ADGRA2Q96PE1 1338 aa17.12■□□□□ 0.33
SMARCD3-211ENST00000485592 SALL1Q9NSC2 1324 aa17.12■□□□□ 0.33
SMARCD3-211ENST00000485592 MYH2Q9UKX2 1941 aa17.11■□□□□ 0.33
SMARCD3-211ENST00000485592 SEMA3EO15041 775 aa17.11■□□□□ 0.33
SMARCD3-211ENST00000485592 GRK4P32298 578 aa17.11■□□□□ 0.33
SMARCD3-211ENST00000485592 ZGPATQ8N5A5 531 aaKnown RBP17.11■□□□□ 0.33
SMARCD3-211ENST00000485592 SMC4Q9NTJ3 1288 aa17.11■□□□□ 0.33
SMARCD3-211ENST00000485592 FAM198AQ9UFP1 575 aa17.11■□□□□ 0.33
SMARCD3-211ENST00000485592 MGAMO43451 1857 aa17.11■□□□□ 0.33
SMARCD3-211ENST00000485592 CXCL11O14625 94 aa17.1■□□□□ 0.33
SMARCD3-211ENST00000485592 CTGFP29279 349 aa17.1■□□□□ 0.33
SMARCD3-211ENST00000485592 FCGRTP55899 365 aa17.1■□□□□ 0.33
SMARCD3-211ENST00000485592 UBXN2AP68543 259 aa17.1■□□□□ 0.33
SMARCD3-211ENST00000485592 MTFR1Q15390 333 aa17.1■□□□□ 0.33
SMARCD3-211ENST00000485592 BIN2Q9UBW5 565 aaPredicted RBP17.1■□□□□ 0.33
SMARCD3-211ENST00000485592 HDAC5Q9UQL6 1122 aa17.1■□□□□ 0.33
SMARCD3-211ENST00000485592 H0YGN5 161 aa17.09■□□□□ 0.33
SMARCD3-211ENST00000485592 IL15P40933 162 aaPredicted RBP17.09■□□□□ 0.33
SMARCD3-211ENST00000485592 MOGSQ13724 837 aa17.09■□□□□ 0.33
SMARCD3-211ENST00000485592 FASTKD5Q7L8L6 764 aaKnown RBP17.09■□□□□ 0.33
SMARCD3-211ENST00000485592 SCYL3Q8IZE3 742 aa17.09■□□□□ 0.33
SMARCD3-211ENST00000485592 SHISA4Q96DD7 197 aa17.09■□□□□ 0.33
SMARCD3-211ENST00000485592 PICK1Q9NRD5 415 aa17.09■□□□□ 0.33
SMARCD3-211ENST00000485592 ENTPD3O75355 529 aa17.08■□□□□ 0.32
SMARCD3-211ENST00000485592 PHKA1P46020 1223 aa17.08■□□□□ 0.32
SMARCD3-211ENST00000485592 RGS3P49796 1198 aa17.08■□□□□ 0.32
SMARCD3-211ENST00000485592 SLFN5Q08AF3 891 aa17.08■□□□□ 0.32
SMARCD3-211ENST00000485592 DZIP1Q86YF9 867 aaKnown RBP17.08■□□□□ 0.32
SMARCD3-211ENST00000485592 ZSCAN29Q8IWY8 852 aaPredicted RBP17.08■□□□□ 0.32
SMARCD3-211ENST00000485592 SLF2Q8IX21 1173 aa17.08■□□□□ 0.32
SMARCD3-211ENST00000485592 DPF3Q92784 378 aa17.08■□□□□ 0.32
SMARCD3-211ENST00000485592 DOCK1Q14185 1865 aa17.07■□□□□ 0.32
SMARCD3-211ENST00000485592 CYP2C8P10632 490 aa17.07■□□□□ 0.32
SMARCD3-211ENST00000485592 BCRP11274 1271 aa17.07■□□□□ 0.32
SMARCD3-211ENST00000485592 CCL5P13501 91 aa17.07■□□□□ 0.32
SMARCD3-211ENST00000485592 GJA8P48165 433 aa17.07■□□□□ 0.32
SMARCD3-211ENST00000485592 PRKCZQ05513 592 aa17.07■□□□□ 0.32
SMARCD3-211ENST00000485592 GPAT2Q6NUI2 795 aa17.07■□□□□ 0.32
SMARCD3-211ENST00000485592 ZFPM1Q8IX07 1006 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms