RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 GNL3LQ9NVN8 582 aaKnown RBP23.96■■□□□ 1.43
COL27A1-205ENST00000485397 RPAP1Q9BWH6 1393 aaPredicted RBP23.95■■□□□ 1.42
COL27A1-205ENST00000485397 ADORA1P30542 326 aa23.95■■□□□ 1.42
COL27A1-205ENST00000485397 RARSP54136 660 aaKnown RBP23.95■■□□□ 1.42
COL27A1-205ENST00000485397 TCP10Q12799 353 aa23.95■■□□□ 1.42
COL27A1-205ENST00000485397 DCAF15Q66K64 600 aa23.95■■□□□ 1.42
COL27A1-205ENST00000485397 FAM151AQ8WW52 585 aa23.95■■□□□ 1.42
COL27A1-205ENST00000485397 ZNF341Q9BYN7 854 aa23.95■■□□□ 1.42
COL27A1-205ENST00000485397 IRF6O14896 467 aa23.94■■□□□ 1.42
COL27A1-205ENST00000485397 LDHBP07195 334 aaKnown RBP23.94■■□□□ 1.42
COL27A1-205ENST00000485397 INPP5BP32019 993 aa23.94■■□□□ 1.42
COL27A1-205ENST00000485397 NFIAQ12857 509 aa23.94■■□□□ 1.42
COL27A1-205ENST00000485397 COPRSQ9NQ92 184 aa23.94■■□□□ 1.42
COL27A1-205ENST00000485397 HDAC5Q9UQL6 1122 aa23.94■■□□□ 1.42
COL27A1-205ENST00000485397 MYH13Q9UKX3 1938 aa23.94■■□□□ 1.42
COL27A1-205ENST00000485397 POTEFA5A3E0 1075 aa23.93■■□□□ 1.42
COL27A1-205ENST00000485397 CETPP11597 493 aa23.93■■□□□ 1.42
COL27A1-205ENST00000485397 DENND2AQ9ULE3 1009 aa23.93■■□□□ 1.42
COL27A1-205ENST00000485397 SALL1Q9NSC2 1324 aa23.92■■□□□ 1.42
COL27A1-205ENST00000485397 BTBD19C9JJ37 291 aa23.92■■□□□ 1.42
COL27A1-205ENST00000485397 CCER2I3L3R5 266 aa23.92■■□□□ 1.42
COL27A1-205ENST00000485397 PPIL2Q13356 520 aa23.92■■□□□ 1.42
COL27A1-205ENST00000485397 SNAPC2Q13487 334 aa23.92■■□□□ 1.42
COL27A1-205ENST00000485397 PRPF38BQ5VTL8 546 aaKnown RBP23.92■■□□□ 1.42
COL27A1-205ENST00000485397 INTS3Q68E01 1043 aaKnown RBP23.92■■□□□ 1.42
COL27A1-205ENST00000485397 USP40Q9NVE5 1235 aa23.92■■□□□ 1.42
COL27A1-205ENST00000485397 SEMA3EO15041 775 aa23.91■■□□□ 1.42
COL27A1-205ENST00000485397 TIMM10P62072 90 aa23.91■■□□□ 1.42
COL27A1-205ENST00000485397 CCDC102BQ68D86 513 aa23.91■■□□□ 1.42
COL27A1-205ENST00000485397 FAM198AQ9UFP1 575 aa23.91■■□□□ 1.42
COL27A1-205ENST00000485397 ZFPM1Q8IX07 1006 aa23.9■■□□□ 1.42
COL27A1-205ENST00000485397 ARMC5Q96C12 935 aa23.9■■□□□ 1.42
COL27A1-205ENST00000485397 TLR2O60603 784 aa23.89■■□□□ 1.41
COL27A1-205ENST00000485397 PPATQ06203 517 aa23.89■■□□□ 1.41
COL27A1-205ENST00000485397 ARHGAP45Q92619 1136 aa23.89■■□□□ 1.41
COL27A1-205ENST00000485397 ZNF112Q9UJU3 913 aa23.89■■□□□ 1.41
COL27A1-205ENST00000485397 SRGAP3O43295 1099 aa23.88■■□□□ 1.41
COL27A1-205ENST00000485397 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.88■■□□□ 1.41
COL27A1-205ENST00000485397 ZCCHC17Q9NP64 241 aaKnown RBP23.88■■□□□ 1.41
COL27A1-205ENST00000485397 PTCH2Q9Y6C5 1203 aa23.88■■□□□ 1.41
COL27A1-205ENST00000485397 WDHD1O75717 1129 aaPredicted RBP23.87■■□□□ 1.41
COL27A1-205ENST00000485397 GNAI3P08754 354 aa23.87■■□□□ 1.41
COL27A1-205ENST00000485397 TFCP2Q12800 502 aa23.87■■□□□ 1.41
COL27A1-205ENST00000485397 RASGRF1Q13972 1273 aa23.87■■□□□ 1.41
COL27A1-205ENST00000485397 ARHGEF6Q15052 776 aa23.87■■□□□ 1.41
COL27A1-205ENST00000485397 ARHGAP39Q9C0H5 1083 aa23.87■■□□□ 1.41
COL27A1-205ENST00000485397 TNNQ9UQP3 1299 aa23.87■■□□□ 1.41
COL27A1-205ENST00000485397 ZBTB22O15209 634 aa23.86■■□□□ 1.41
COL27A1-205ENST00000485397 XAGE2Q96GT9 111 aa23.86■■□□□ 1.41
COL27A1-205ENST00000485397 ABCF2Q9UG63 623 aa23.86■■□□□ 1.41
COL27A1-205ENST00000485397 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.86■■□□□ 1.41
COL27A1-205ENST00000485397 A0A1B0GUL7 405 aa23.85■■□□□ 1.41
COL27A1-205ENST00000485397 RGS3P49796 1198 aa23.85■■□□□ 1.41
COL27A1-205ENST00000485397 ZGPATQ8N5A5 531 aaKnown RBP23.85■■□□□ 1.41
COL27A1-205ENST00000485397 KCNH4Q9UQ05 1017 aa23.85■■□□□ 1.41
COL27A1-205ENST00000485397 GAKO14976 1311 aa23.84■■□□□ 1.41
COL27A1-205ENST00000485397 AK9Q5TCS8 1911 aa23.84■■□□□ 1.41
COL27A1-205ENST00000485397 ECM2O94769 699 aaPredicted RBP23.84■■□□□ 1.41
COL27A1-205ENST00000485397 EN2P19622 333 aaPredicted RBP23.84■■□□□ 1.41
COL27A1-205ENST00000485397 MTX1Q13505 466 aa23.84■■□□□ 1.41
COL27A1-205ENST00000485397 NOL9Q5SY16 702 aaKnown RBP23.84■■□□□ 1.41
COL27A1-205ENST00000485397 DZIP1Q86YF9 867 aaKnown RBP23.84■■□□□ 1.41
COL27A1-205ENST00000485397 ZNF333Q96JL9 665 aa23.84■■□□□ 1.41
COL27A1-205ENST00000485397 KIAA0100Q14667 2235 aaKnown RBP23.84■■□□□ 1.41
COL27A1-205ENST00000485397 BCAR3O75815 825 aa23.83■■□□□ 1.41
COL27A1-205ENST00000485397 TRIM27P14373 513 aa23.83■■□□□ 1.41
COL27A1-205ENST00000485397 LACTBP83111 547 aaPredicted RBP23.83■■□□□ 1.41
COL27A1-205ENST00000485397 C17orf99Q6UX52 265 aa23.83■■□□□ 1.41
COL27A1-205ENST00000485397 SH3BP5LQ7L8J4 393 aa23.83■■□□□ 1.41
COL27A1-205ENST00000485397 ANKRD23Q86SG2 305 aa23.83■■□□□ 1.41
COL27A1-205ENST00000485397 IDI2Q9BXS1 227 aa23.83■■□□□ 1.41
COL27A1-205ENST00000485397 CPA4Q9UI42 421 aa23.83■■□□□ 1.41
COL27A1-205ENST00000485397 AKAP2Q9Y2D5 859 aa23.83■■□□□ 1.41
COL27A1-205ENST00000485397 HTTP42858 3142 aa23.83■■□□□ 1.4
COL27A1-205ENST00000485397 ATRNL1Q5VV63 1379 aa23.82■■□□□ 1.4
COL27A1-205ENST00000485397 PDHXO00330 501 aa23.82■■□□□ 1.4
COL27A1-205ENST00000485397 ENTPD3O75355 529 aa23.82■■□□□ 1.4
COL27A1-205ENST00000485397 MOGSQ13724 837 aa23.82■■□□□ 1.4
COL27A1-205ENST00000485397 KIF22Q14807 665 aa23.82■■□□□ 1.4
COL27A1-205ENST00000485397 SLC9C1Q4G0N8 1177 aa23.82■■□□□ 1.4
COL27A1-205ENST00000485397 FRAT1Q92837 279 aaPredicted RBP23.82■■□□□ 1.4
COL27A1-205ENST00000485397 NEUROD6Q96NK8 337 aa23.82■■□□□ 1.4
COL27A1-205ENST00000485397 ZSWIM8A7E2V4 1837 aa23.82■■□□□ 1.4
COL27A1-205ENST00000485397 PDS5AQ29RF7 1337 aaKnown RBP23.82■■□□□ 1.4
COL27A1-205ENST00000485397 MYH2Q9UKX2 1941 aa23.81■■□□□ 1.4
COL27A1-205ENST00000485397 PHF20L1A8MW92 1017 aa23.81■■□□□ 1.4
COL27A1-205ENST00000485397 IPO8O15397 1037 aaKnown RBP23.81■■□□□ 1.4
COL27A1-205ENST00000485397 SLURP2P0DP57 97 aa23.81■■□□□ 1.4
COL27A1-205ENST00000485397 BTDP43251 543 aa23.81■■□□□ 1.4
COL27A1-205ENST00000485397 MVPQ14764 893 aaKnown RBP23.81■■□□□ 1.4
COL27A1-205ENST00000485397 FAM163AQ96GL9 167 aaPredicted RBP23.81■■□□□ 1.4
COL27A1-205ENST00000485397 TMEM106CQ9BVX2 250 aa23.81■■□□□ 1.4
COL27A1-205ENST00000485397 RFX7Q2KHR2 1363 aa23.8■■□□□ 1.4
COL27A1-205ENST00000485397 MYCP01106 439 aaPredicted RBP23.8■■□□□ 1.4
COL27A1-205ENST00000485397 SPTY2D1Q68D10 685 aaPredicted RBP23.8■■□□□ 1.4
COL27A1-205ENST00000485397 ATF7IPQ6VMQ6 1270 aa23.8■■□□□ 1.4
COL27A1-205ENST00000485397 NBPF11Q86T75 865 aa23.8■■□□□ 1.4
COL27A1-205ENST00000485397 ZSCAN29Q8IWY8 852 aaPredicted RBP23.8■■□□□ 1.4
COL27A1-205ENST00000485397 SLF2Q8IX21 1173 aa23.8■■□□□ 1.4
COL27A1-205ENST00000485397 CLUAP1Q96AJ1 413 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms