RNA–Protein interactions for RNA: ENST00000485124.1

TMEM40-208, Transcript of transmembrane protein 40, humanhuman

TSL 5

Gene TMEM40, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-208ENST00000485124 IQSEC3Q9UPP2 1182 aaPredicted RBP12.32□□□□□ -0.44
TMEM40-208ENST00000485124 SALL1Q9NSC2 1324 aa12.32□□□□□ -0.44
TMEM40-208ENST00000485124 UBTFL1P0CB47 393 aaPredicted RBP12.31□□□□□ -0.44
TMEM40-208ENST00000485124 ATG9AQ7Z3C6 839 aa12.31□□□□□ -0.44
TMEM40-208ENST00000485124 CDAN1Q8IWY9 1227 aa12.31□□□□□ -0.44
TMEM40-208ENST00000485124 KLHDC4Q8TBB5 520 aa12.31□□□□□ -0.44
TMEM40-208ENST00000485124 BRI3BPQ8WY22 251 aa12.31□□□□□ -0.44
TMEM40-208ENST00000485124 ARMC5Q96C12 935 aa12.31□□□□□ -0.44
TMEM40-208ENST00000485124 CCDC136Q96JN2 1154 aa12.31□□□□□ -0.44
TMEM40-208ENST00000485124 API5Q9BZZ5 524 aaKnown RBP12.31□□□□□ -0.44
TMEM40-208ENST00000485124 EFCC1Q9HA90 598 aa12.31□□□□□ -0.44
TMEM40-208ENST00000485124 ZFYVE28Q9HCC9 887 aa12.31□□□□□ -0.44
TMEM40-208ENST00000485124 PTPN22Q9Y2R2 807 aa12.31□□□□□ -0.44
TMEM40-208ENST00000485124 CCL15-CCL14A0A0B4J2E2 113 aa12.3□□□□□ -0.44
TMEM40-208ENST00000485124 CETPP11597 493 aa12.3□□□□□ -0.44
TMEM40-208ENST00000485124 TAF1CQ15572 869 aaPredicted RBP12.3□□□□□ -0.44
TMEM40-208ENST00000485124 CCL15Q16663 113 aa12.3□□□□□ -0.44
TMEM40-208ENST00000485124 FAM151AQ8WW52 585 aa12.3□□□□□ -0.44
TMEM40-208ENST00000485124 GNL3LQ9NVN8 582 aaKnown RBP12.3□□□□□ -0.44
TMEM40-208ENST00000485124 SNCAIPQ9Y6H5 919 aa12.3□□□□□ -0.44
TMEM40-208ENST00000485124 AK9Q5TCS8 1911 aa12.29□□□□□ -0.44
TMEM40-208ENST00000485124 GNRH1P01148 92 aa12.29□□□□□ -0.44
TMEM40-208ENST00000485124 IL15P40933 162 aaPredicted RBP12.29□□□□□ -0.44
TMEM40-208ENST00000485124 PPATQ06203 517 aa12.29□□□□□ -0.44
TMEM40-208ENST00000485124 PPIL2Q13356 520 aa12.29□□□□□ -0.44
TMEM40-208ENST00000485124 ATP2B3Q16720 1220 aa12.29□□□□□ -0.44
TMEM40-208ENST00000485124 CD99L2Q8TCZ2 262 aa12.29□□□□□ -0.44
TMEM40-208ENST00000485124 ARHGAP45Q92619 1136 aa12.29□□□□□ -0.44
TMEM40-208ENST00000485124 OTUD5Q96G74 571 aa12.29□□□□□ -0.44
TMEM40-208ENST00000485124 WRNIP1Q96S55 665 aa12.29□□□□□ -0.44
TMEM40-208ENST00000485124 ZNF341Q9BYN7 854 aa12.29□□□□□ -0.44
TMEM40-208ENST00000485124 COPRSQ9NQ92 184 aa12.29□□□□□ -0.44
TMEM40-208ENST00000485124 PCDH10Q9P2E7 1040 aa12.29□□□□□ -0.44
TMEM40-208ENST00000485124 CEP126Q9P2H0 1117 aa12.29□□□□□ -0.44
TMEM40-208ENST00000485124 PDS5AQ29RF7 1337 aaKnown RBP12.29□□□□□ -0.44
TMEM40-208ENST00000485124 MYH2Q9UKX2 1941 aa12.29□□□□□ -0.44
TMEM40-208ENST00000485124 TLR2O60603 784 aa12.28□□□□□ -0.44
TMEM40-208ENST00000485124 CACNB3P54284 484 aa12.28□□□□□ -0.44
TMEM40-208ENST00000485124 SNAPC2Q13487 334 aa12.28□□□□□ -0.44
TMEM40-208ENST00000485124 ZGPATQ8N5A5 531 aaKnown RBP12.28□□□□□ -0.44
TMEM40-208ENST00000485124 CNKSR2Q8WXI2 1034 aa12.28□□□□□ -0.44
TMEM40-208ENST00000485124 CRBNQ96SW2 442 aa12.28□□□□□ -0.44
TMEM40-208ENST00000485124 ZNF112Q9UJU3 913 aa12.28□□□□□ -0.44
TMEM40-208ENST00000485124 DENND2AQ9ULE3 1009 aa12.28□□□□□ -0.44
TMEM40-208ENST00000485124 DOCK2Q92608 1830 aa12.27□□□□□ -0.44
TMEM40-208ENST00000485124 LDHBP07195 334 aaKnown RBP12.27□□□□□ -0.45
TMEM40-208ENST00000485124 PRMT2P55345 433 aa12.27□□□□□ -0.45
TMEM40-208ENST00000485124 FAM43AQ8N2R8 423 aa12.27□□□□□ -0.45
TMEM40-208ENST00000485124 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.27□□□□□ -0.45
TMEM40-208ENST00000485124 DAGLAQ9Y4D2 1042 aa12.27□□□□□ -0.45
TMEM40-208ENST00000485124 IRF6O14896 467 aa12.26□□□□□ -0.45
TMEM40-208ENST00000485124 GNAI3P08754 354 aa12.26□□□□□ -0.45
TMEM40-208ENST00000485124 PRDX5P30044 214 aa12.26□□□□□ -0.45
TMEM40-208ENST00000485124 MTX1Q13505 466 aa12.26□□□□□ -0.45
TMEM40-208ENST00000485124 NOL9Q5SY16 702 aaKnown RBP12.26□□□□□ -0.45
TMEM40-208ENST00000485124 C20orf194Q5TEA3 1177 aa12.26□□□□□ -0.45
TMEM40-208ENST00000485124 CDC42EP5Q6NZY7 148 aa12.26□□□□□ -0.45
TMEM40-208ENST00000485124 NBPF11Q86T75 865 aa12.26□□□□□ -0.45
TMEM40-208ENST00000485124 ZKSCAN4Q969J2 545 aaPredicted RBP12.26□□□□□ -0.45
TMEM40-208ENST00000485124 GCC1Q96CN9 775 aa12.26□□□□□ -0.45
TMEM40-208ENST00000485124 NOB1Q9ULX3 412 aaKnown RBP12.26□□□□□ -0.45
TMEM40-208ENST00000485124 KCNH4Q9UQ05 1017 aa12.26□□□□□ -0.45
TMEM40-208ENST00000485124 BTBD19C9JJ37 291 aa12.25□□□□□ -0.45
TMEM40-208ENST00000485124 KIF22Q14807 665 aa12.25□□□□□ -0.45
TMEM40-208ENST00000485124 ANKRD23Q86SG2 305 aa12.25□□□□□ -0.45
TMEM40-208ENST00000485124 SLF2Q8IX21 1173 aa12.25□□□□□ -0.45
TMEM40-208ENST00000485124 FAM163AQ96GL9 167 aaPredicted RBP12.25□□□□□ -0.45
TMEM40-208ENST00000485124 ZNF333Q96JL9 665 aa12.25□□□□□ -0.45
TMEM40-208ENST00000485124 IDI2Q9BXS1 227 aa12.25□□□□□ -0.45
TMEM40-208ENST00000485124 SIL1Q9H173 461 aa12.25□□□□□ -0.45
TMEM40-208ENST00000485124 LRRFIP2Q9Y608 721 aaKnown RBP12.25□□□□□ -0.45
TMEM40-208ENST00000485124 GAKO14976 1311 aa12.25□□□□□ -0.45
TMEM40-208ENST00000485124 RFX7Q2KHR2 1363 aa12.25□□□□□ -0.45
TMEM40-208ENST00000485124 CXCL11O14625 94 aa12.24□□□□□ -0.45
TMEM40-208ENST00000485124 ENTPD3O75355 529 aa12.24□□□□□ -0.45
TMEM40-208ENST00000485124 RARSP54136 660 aaKnown RBP12.24□□□□□ -0.45
TMEM40-208ENST00000485124 LACTBP83111 547 aaPredicted RBP12.24□□□□□ -0.45
TMEM40-208ENST00000485124 CAP1Q01518 475 aa12.24□□□□□ -0.45
TMEM40-208ENST00000485124 DIXDC1Q155Q3 683 aa12.24□□□□□ -0.45
TMEM40-208ENST00000485124 ATRNL1Q5VV63 1379 aa12.24□□□□□ -0.45
TMEM40-208ENST00000485124 CCDC102BQ68D86 513 aa12.24□□□□□ -0.45
TMEM40-208ENST00000485124 FAM198AQ9UFP1 575 aa12.24□□□□□ -0.45
TMEM40-208ENST00000485124 AKAP2Q9Y2D5 859 aa12.24□□□□□ -0.45
TMEM40-208ENST00000485124 PTPRFP10586 1907 aa12.23□□□□□ -0.45
TMEM40-208ENST00000485124 POTEFA5A3E0 1075 aa12.23□□□□□ -0.45
TMEM40-208ENST00000485124 NPM3O75607 178 aaKnown RBP12.23□□□□□ -0.45
TMEM40-208ENST00000485124 MAP4K4O95819 1239 aaPredicted RBP12.23□□□□□ -0.45
TMEM40-208ENST00000485124 INPP5BP32019 993 aa12.23□□□□□ -0.45
TMEM40-208ENST00000485124 PHKA1P46020 1223 aa12.23□□□□□ -0.45
TMEM40-208ENST00000485124 MAP3K10Q02779 954 aa12.23□□□□□ -0.45
TMEM40-208ENST00000485124 NFIAQ12857 509 aa12.23□□□□□ -0.45
TMEM40-208ENST00000485124 SLC9C1Q4G0N8 1177 aa12.23□□□□□ -0.45
TMEM40-208ENST00000485124 SPTY2D1Q68D10 685 aaPredicted RBP12.23□□□□□ -0.45
TMEM40-208ENST00000485124 C17orf99Q6UX52 265 aa12.23□□□□□ -0.45
TMEM40-208ENST00000485124 MIGA2Q7L4E1 593 aa12.23□□□□□ -0.45
TMEM40-208ENST00000485124 MEIS3Q99687 375 aa12.23□□□□□ -0.45
TMEM40-208ENST00000485124 TMEM106CQ9BVX2 250 aa12.23□□□□□ -0.45
TMEM40-208ENST00000485124 USP40Q9NVE5 1235 aa12.23□□□□□ -0.45
TMEM40-208ENST00000485124 ADGRA2Q96PE1 1338 aa12.22□□□□□ -0.45
TMEM40-208ENST00000485124 IPO8O15397 1037 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms