RNA–Protein interactions for RNA: ENST00000485122.6

EXOSC1-210, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-210ENST00000485122 GAS2L1Q99501 681 aaPredicted RBP13.17□□□□□ -0.3
EXOSC1-210ENST00000485122 PRDM12Q9H4Q4 367 aa13.17□□□□□ -0.3
EXOSC1-210ENST00000485122 MINPP1Q9UNW1 487 aa13.17□□□□□ -0.3
EXOSC1-210ENST00000485122 INPP5BP32019 993 aa13.16□□□□□ -0.3
EXOSC1-210ENST00000485122 ADGRE1Q14246 886 aa13.16□□□□□ -0.3
EXOSC1-210ENST00000485122 CCDC152Q4G0S7 254 aa13.16□□□□□ -0.3
EXOSC1-210ENST00000485122 AKNAD1Q5T1N1 836 aa13.16□□□□□ -0.3
EXOSC1-210ENST00000485122 RIC3Q7Z5B4 369 aa13.16□□□□□ -0.3
EXOSC1-210ENST00000485122 PNISRQ8TF01 805 aaKnown RBP13.16□□□□□ -0.3
EXOSC1-210ENST00000485122 TRIB2Q92519 343 aa13.16□□□□□ -0.3
EXOSC1-210ENST00000485122 BADQ92934 168 aa13.16□□□□□ -0.3
EXOSC1-210ENST00000485122 PLXNA1Q9UIW2 1896 aa13.15□□□□□ -0.3
EXOSC1-210ENST00000485122 SMIM22K7EJ46 135 aa13.15□□□□□ -0.3
EXOSC1-210ENST00000485122 HTATSF1O43719 755 aaKnown RBP13.15□□□□□ -0.3
EXOSC1-210ENST00000485122 PPATQ06203 517 aa13.15□□□□□ -0.3
EXOSC1-210ENST00000485122 COA7Q96BR5 231 aa13.15□□□□□ -0.3
EXOSC1-210ENST00000485122 RNPC3Q96LT9 517 aaKnown RBP13.15□□□□□ -0.3
EXOSC1-210ENST00000485122 PRKAG2Q9UGJ0 569 aa13.15□□□□□ -0.3
EXOSC1-210ENST00000485122 KCNH4Q9UQ05 1017 aa13.15□□□□□ -0.3
EXOSC1-210ENST00000485122 PTPRFP10586 1907 aa13.14□□□□□ -0.31
EXOSC1-210ENST00000485122 PRKAR2AP13861 404 aaKnown RBP13.14□□□□□ -0.31
EXOSC1-210ENST00000485122 CACNB3P54284 484 aa13.14□□□□□ -0.31
EXOSC1-210ENST00000485122 CC2D1BQ5T0F9 858 aaKnown RBP13.14□□□□□ -0.31
EXOSC1-210ENST00000485122 PHOX2BQ99453 314 aa13.14□□□□□ -0.31
EXOSC1-210ENST00000485122 SENP6Q9GZR1 1112 aaPredicted RBP13.14□□□□□ -0.31
EXOSC1-210ENST00000485122 CD209Q9NNX6 404 aa13.14□□□□□ -0.31
EXOSC1-210ENST00000485122 PRDM5Q9NQX1 630 aaPredicted RBP13.14□□□□□ -0.31
EXOSC1-210ENST00000485122 RTP1P59025 263 aa13.13□□□□□ -0.31
EXOSC1-210ENST00000485122 CXXC1Q9P0U4 656 aaPredicted RBP13.13□□□□□ -0.31
EXOSC1-210ENST00000485122 MYH3P11055 1940 aa13.12□□□□□ -0.31
EXOSC1-210ENST00000485122 RLFQ13129 1914 aa13.12□□□□□ -0.31
EXOSC1-210ENST00000485122 IGFBP4P22692 258 aa13.12□□□□□ -0.31
EXOSC1-210ENST00000485122 EPHB4P54760 987 aa13.12□□□□□ -0.31
EXOSC1-210ENST00000485122 CNGB1Q14028 1251 aaPredicted RBP13.12□□□□□ -0.31
EXOSC1-210ENST00000485122 ANKRD13CQ8N6S4 541 aa13.12□□□□□ -0.31
EXOSC1-210ENST00000485122 PLBD2Q8NHP8 589 aa13.12□□□□□ -0.31
EXOSC1-210ENST00000485122 TIFAQ96CG3 184 aa13.12□□□□□ -0.31
EXOSC1-210ENST00000485122 FBXL18Q96ME1 805 aa13.12□□□□□ -0.31
EXOSC1-210ENST00000485122 A0A1B0GUL6 1792 aa13.12□□□□□ -0.31
EXOSC1-210ENST00000485122 SNAP23O00161 211 aa13.11□□□□□ -0.31
EXOSC1-210ENST00000485122 CCND3P30281 292 aaPredicted RBP13.11□□□□□ -0.31
EXOSC1-210ENST00000485122 MAP3K21Q5TCX8 1036 aa13.11□□□□□ -0.31
EXOSC1-210ENST00000485122 LHX8Q68G74 356 aa13.11□□□□□ -0.31
EXOSC1-210ENST00000485122 ATP11BQ9Y2G3 1177 aa13.11□□□□□ -0.31
EXOSC1-210ENST00000485122 PDE8AO60658 829 aa13.1□□□□□ -0.31
EXOSC1-210ENST00000485122 TNNI2P48788 182 aa13.1□□□□□ -0.31
EXOSC1-210ENST00000485122 MIGA2Q7L4E1 593 aa13.1□□□□□ -0.31
EXOSC1-210ENST00000485122 SH3RF1Q7Z6J0 888 aa13.1□□□□□ -0.31
EXOSC1-210ENST00000485122 MICALL1Q8N3F8 863 aa13.1□□□□□ -0.31
EXOSC1-210ENST00000485122 SMCR8Q8TEV9 937 aaPredicted RBP13.1□□□□□ -0.31
EXOSC1-210ENST00000485122 UIMC1Q96RL1 719 aa13.1□□□□□ -0.31
EXOSC1-210ENST00000485122 BSDC1Q9NW68 430 aaPredicted RBP13.1□□□□□ -0.31
EXOSC1-210ENST00000485122 DNAH12Q6ZR08 3092 aa13.09□□□□□ -0.31
EXOSC1-210ENST00000485122 PBX2P40425 430 aa13.09□□□□□ -0.31
EXOSC1-210ENST00000485122 DZIP1LQ8IYY4 767 aaKnown RBP13.09□□□□□ -0.31
EXOSC1-210ENST00000485122 CDC5LQ99459 802 aaKnown RBP13.09□□□□□ -0.31
EXOSC1-210ENST00000485122 CHPF2Q9P2E5 772 aa13.09□□□□□ -0.31
EXOSC1-210ENST00000485122 GJD2Q9UKL4 321 aa13.09□□□□□ -0.31
EXOSC1-210ENST00000485122 LEMD3Q9Y2U8 911 aa13.09□□□□□ -0.31
EXOSC1-210ENST00000485122 PRR33A8MZF0 331 aa13.08□□□□□ -0.32
EXOSC1-210ENST00000485122 CYP2B6P20813 491 aa13.08□□□□□ -0.32
EXOSC1-210ENST00000485122 FOXK2Q01167 660 aa13.08□□□□□ -0.32
EXOSC1-210ENST00000485122 GADL1Q6ZQY3 521 aa13.08□□□□□ -0.32
EXOSC1-210ENST00000485122 TSPYL4Q9UJ04 414 aa13.08□□□□□ -0.32
EXOSC1-210ENST00000485122 TRIM43BA6NCK2 446 aa13.07□□□□□ -0.32
EXOSC1-210ENST00000485122 ITGB8P26012 769 aa13.07□□□□□ -0.32
EXOSC1-210ENST00000485122 CACNB2Q08289 660 aaPredicted RBP13.07□□□□□ -0.32
EXOSC1-210ENST00000485122 TRIM43Q96BQ3 446 aaPredicted RBP13.07□□□□□ -0.32
EXOSC1-210ENST00000485122 GREM2Q9H772 168 aa13.07□□□□□ -0.32
EXOSC1-210ENST00000485122 CD320Q9NPF0 282 aa13.07□□□□□ -0.32
EXOSC1-210ENST00000485122 PDLIM7Q9NR12 457 aa13.07□□□□□ -0.32
EXOSC1-210ENST00000485122 TTF2Q9UNY4 1162 aaKnown RBP13.07□□□□□ -0.32
EXOSC1-210ENST00000485122 GBF1Q92538 1859 aa13.07□□□□□ -0.32
EXOSC1-210ENST00000485122 ZDBF2Q9HCK1 2354 aa13.07□□□□□ -0.32
EXOSC1-210ENST00000485122 PHIPQ8WWQ0 1821 aa13.06□□□□□ -0.32
EXOSC1-210ENST00000485122 REV3LO60673 3130 aa13.06□□□□□ -0.32
EXOSC1-210ENST00000485122 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.06□□□□□ -0.32
EXOSC1-210ENST00000485122 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.06□□□□□ -0.32
EXOSC1-210ENST00000485122 GRXCR1A8MXD5 290 aa13.06□□□□□ -0.32
EXOSC1-210ENST00000485122 PI4K2BG5E9Z4 385 aa13.06□□□□□ -0.32
EXOSC1-210ENST00000485122 KRT37O76014 449 aa13.06□□□□□ -0.32
EXOSC1-210ENST00000485122 KRT24Q2M2I5 525 aa13.06□□□□□ -0.32
EXOSC1-210ENST00000485122 ANKS1AQ92625 1134 aa13.06□□□□□ -0.32
EXOSC1-210ENST00000485122 ZNF341Q9BYN7 854 aa13.06□□□□□ -0.32
EXOSC1-210ENST00000485122 DAGLAQ9Y4D2 1042 aa13.06□□□□□ -0.32
EXOSC1-210ENST00000485122 XIRP2A4UGR9 3374 aa13.06□□□□□ -0.32
EXOSC1-210ENST00000485122 A0A0G2JLL6 359 aaPredicted RBP13.05□□□□□ -0.32
EXOSC1-210ENST00000485122 CTSWP56202 376 aa13.05□□□□□ -0.32
EXOSC1-210ENST00000485122 FKBP1AP62942 108 aaKnown RBP13.05□□□□□ -0.32
EXOSC1-210ENST00000485122 TRIM28Q13263 835 aaKnown RBP13.05□□□□□ -0.32
EXOSC1-210ENST00000485122 TRIM60Q495X7 471 aa13.05□□□□□ -0.32
EXOSC1-210ENST00000485122 PRRT2Q7Z6L0 340 aaPredicted RBP13.05□□□□□ -0.32
EXOSC1-210ENST00000485122 PBX4Q9BYU1 374 aa13.05□□□□□ -0.32
EXOSC1-210ENST00000485122 ST18O60284 1047 aa13.04□□□□□ -0.32
EXOSC1-210ENST00000485122 PCCAP05165 728 aaPredicted RBP13.04□□□□□ -0.32
EXOSC1-210ENST00000485122 CRKP46108 304 aa13.04□□□□□ -0.32
EXOSC1-210ENST00000485122 KCNJ4P48050 445 aa13.04□□□□□ -0.32
EXOSC1-210ENST00000485122 SKIV2LQ15477 1246 aaKnown RBP13.04□□□□□ -0.32
EXOSC1-210ENST00000485122 FAM110CQ1W6H9 321 aa13.04□□□□□ -0.32
EXOSC1-210ENST00000485122 AAK1Q2M2I8 961 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms