RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 TMEM57Q8N5G2 664 aa35.15■■■■□ 3.22
HLA-C-207ENST00000484378 CNKSR2Q8WXI2 1034 aa35.15■■■■□ 3.22
HLA-C-207ENST00000484378 MLLT1Q03111 559 aaPredicted RBP35.14■■■■□ 3.22
HLA-C-207ENST00000484378 RASGRF1Q13972 1273 aa35.14■■■■□ 3.22
HLA-C-207ENST00000484378 CDC42EP5Q6NZY7 148 aa35.14■■■■□ 3.22
HLA-C-207ENST00000484378 WRNIP1Q96S55 665 aa35.14■■■■□ 3.22
HLA-C-207ENST00000484378 ZBTB22O15209 634 aa35.13■■■■□ 3.21
HLA-C-207ENST00000484378 MVPQ14764 893 aaKnown RBP35.13■■■■□ 3.21
HLA-C-207ENST00000484378 DCAF15Q66K64 600 aa35.13■■■■□ 3.21
HLA-C-207ENST00000484378 OTUD5Q96G74 571 aa35.13■■■■□ 3.21
HLA-C-207ENST00000484378 XAGE2Q96GT9 111 aa35.13■■■■□ 3.21
HLA-C-207ENST00000484378 TESPA1A2RU30 521 aaPredicted RBP35.12■■■■□ 3.21
HLA-C-207ENST00000484378 FAM151AQ8WW52 585 aa35.12■■■■□ 3.21
HLA-C-207ENST00000484378 HPS5Q9UPZ3 1129 aa35.12■■■■□ 3.21
HLA-C-207ENST00000484378 PDS5AQ29RF7 1337 aaKnown RBP35.11■■■■□ 3.21
HLA-C-207ENST00000484378 PNMA6EA0A0J9YXQ4 647 aa35.11■■■■□ 3.21
HLA-C-207ENST00000484378 PTPN18Q99952 460 aa35.11■■■■□ 3.21
HLA-C-207ENST00000484378 TCP10Q12799 353 aa35.1■■■■□ 3.21
HLA-C-207ENST00000484378 DZIP1Q86YF9 867 aaKnown RBP35.1■■■■□ 3.21
HLA-C-207ENST00000484378 MS4A4AQ96JQ5 239 aa35.1■■■■□ 3.21
HLA-C-207ENST00000484378 NEUROD6Q96NK8 337 aa35.1■■■■□ 3.21
HLA-C-207ENST00000484378 USP40Q9NVE5 1235 aa35.1■■■■□ 3.21
HLA-C-207ENST00000484378 ABCF2Q9UG63 623 aa35.1■■■■□ 3.21
HLA-C-207ENST00000484378 SPDYE5A6NIY4 337 aa35.09■■■■□ 3.21
HLA-C-207ENST00000484378 GTF2A2P52657 109 aa35.09■■■■□ 3.21
HLA-C-207ENST00000484378 CRHR2Q13324 411 aa35.09■■■■□ 3.21
HLA-C-207ENST00000484378 FTSJ3Q8IY81 847 aaKnown RBP35.09■■■■□ 3.21
HLA-C-207ENST00000484378 SNCAIPQ9Y6H5 919 aa35.09■■■■□ 3.21
HLA-C-207ENST00000484378 NFIAQ12857 509 aa35.08■■■■□ 3.21
HLA-C-207ENST00000484378 G3BP1Q13283 466 aaKnown RBP eCLIP35.08■■■■□ 3.21
HLA-C-207ENST00000484378 ZKSCAN4Q969J2 545 aaPredicted RBP35.08■■■■□ 3.21
HLA-C-207ENST00000484378 ZNF341Q9BYN7 854 aa35.08■■■■□ 3.21
HLA-C-207ENST00000484378 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP35.08■■■■□ 3.21
HLA-C-207ENST00000484378 MYH2Q9UKX2 1941 aa35.08■■■■□ 3.21
HLA-C-207ENST00000484378 CCL15-CCL14A0A0B4J2E2 113 aa35.07■■■■□ 3.2
HLA-C-207ENST00000484378 SOX10P56693 466 aa35.07■■■■□ 3.2
HLA-C-207ENST00000484378 CCL15Q16663 113 aa35.07■■■■□ 3.2
HLA-C-207ENST00000484378 GORABQ5T7V8 394 aa35.07■■■■□ 3.2
HLA-C-207ENST00000484378 FBXO46Q6PJ61 603 aaPredicted RBP35.07■■■■□ 3.2
HLA-C-207ENST00000484378 MIGA2Q7L4E1 593 aa35.07■■■■□ 3.2
HLA-C-207ENST00000484378 BRI3BPQ8WY22 251 aa35.07■■■■□ 3.2
HLA-C-207ENST00000484378 SPTY2D1Q68D10 685 aaPredicted RBP35.06■■■■□ 3.2
HLA-C-207ENST00000484378 ERO1BQ86YB8 467 aa35.06■■■■□ 3.2
HLA-C-207ENST00000484378 AK9Q5TCS8 1911 aa35.06■■■■□ 3.2
HLA-C-207ENST00000484378 SLF2Q8IX21 1173 aa35.05■■■■□ 3.2
HLA-C-207ENST00000484378 FAM198AQ9UFP1 575 aa35.05■■■■□ 3.2
HLA-C-207ENST00000484378 GAKO14976 1311 aa35.05■■■■□ 3.2
HLA-C-207ENST00000484378 ZBED9Q6R2W3 1325 aa35.05■■■■□ 3.2
HLA-C-207ENST00000484378 ITPRIPQ8IWB1 547 aa35.03■■■■□ 3.2
HLA-C-207ENST00000484378 ERO1AQ96HE7 468 aa35.02■■■■□ 3.2
HLA-C-207ENST00000484378 TRIM17Q9Y577 477 aa35.02■■■■□ 3.2
HLA-C-207ENST00000484378 INPP5BP32019 993 aa35.01■■■■□ 3.2
HLA-C-207ENST00000484378 PPIL2Q13356 520 aa35■■■■□ 3.19
HLA-C-207ENST00000484378 TAF1CQ15572 869 aaPredicted RBP35■■■■□ 3.19
HLA-C-207ENST00000484378 ERICH6Q7L0X2 663 aa35■■■■□ 3.19
HLA-C-207ENST00000484378 C1orf115Q9H7X2 142 aa35■■■■□ 3.19
HLA-C-207ENST00000484378 HMG20BQ9P0W2 317 aa35■■■■□ 3.19
HLA-C-207ENST00000484378 IRF6O14896 467 aa34.99■■■■□ 3.19
HLA-C-207ENST00000484378 CETPP11597 493 aa34.99■■■■□ 3.19
HLA-C-207ENST00000484378 RGS3P49796 1198 aa34.99■■■■□ 3.19
HLA-C-207ENST00000484378 OS9Q13438 667 aaPredicted RBP34.99■■■■□ 3.19
HLA-C-207ENST00000484378 SNAPC2Q13487 334 aa34.99■■■■□ 3.19
HLA-C-207ENST00000484378 POLA2Q14181 598 aa34.99■■■■□ 3.19
HLA-C-207ENST00000484378 OTOP1Q7RTM1 612 aa34.99■■■■□ 3.19
HLA-C-207ENST00000484378 FAM43AQ8N2R8 423 aa34.99■■■■□ 3.19
HLA-C-207ENST00000484378 SPATA5Q8NB90 893 aa34.99■■■■□ 3.19
HLA-C-207ENST00000484378 CD99L2Q8TCZ2 262 aa34.99■■■■□ 3.19
HLA-C-207ENST00000484378 IDI2Q9BXS1 227 aa34.99■■■■□ 3.19
HLA-C-207ENST00000484378 MROH7-TTC4A0A0A0MT08 1334 aa34.99■■■■□ 3.19
HLA-C-207ENST00000484378 DOCK2Q92608 1830 aa34.99■■■■□ 3.19
HLA-C-207ENST00000484378 HTTP42858 3142 aa34.99■■■■□ 3.19
HLA-C-207ENST00000484378 RLBP1P12271 317 aa34.98■■■■□ 3.19
HLA-C-207ENST00000484378 ARID4AP29374 1257 aaPredicted RBP34.98■■■■□ 3.19
HLA-C-207ENST00000484378 BTDP43251 543 aa34.98■■■■□ 3.19
HLA-C-207ENST00000484378 SP3Q02447 781 aa34.98■■■■□ 3.19
HLA-C-207ENST00000484378 MECOMQ03112 1051 aa34.98■■■■□ 3.19
HLA-C-207ENST00000484378 PI16Q6UXB8 463 aa34.98■■■■□ 3.19
HLA-C-207ENST00000484378 ZFPM1Q8IX07 1006 aa34.98■■■■□ 3.19
HLA-C-207ENST00000484378 FAM163AQ96GL9 167 aaPredicted RBP34.98■■■■□ 3.19
HLA-C-207ENST00000484378 ZFYVE28Q9HCC9 887 aa34.98■■■■□ 3.19
HLA-C-207ENST00000484378 RFX7Q2KHR2 1363 aa34.98■■■■□ 3.19
HLA-C-207ENST00000484378 ENTPD3O75355 529 aa34.97■■■■□ 3.19
HLA-C-207ENST00000484378 SSH3Q8TE77 659 aa34.97■■■■□ 3.19
HLA-C-207ENST00000484378 ZNF112Q9UJU3 913 aa34.97■■■■□ 3.19
HLA-C-207ENST00000484378 WDHD1O75717 1129 aaPredicted RBP34.96■■■■□ 3.19
HLA-C-207ENST00000484378 ATP8B2P98198 1209 aa34.96■■■■□ 3.19
HLA-C-207ENST00000484378 PPATQ06203 517 aa34.96■■■■□ 3.19
HLA-C-207ENST00000484378 TNRC18O15417 2968 aaPredicted RBP34.96■■■■□ 3.19
HLA-C-207ENST00000484378 ZSCAN29Q8IWY8 852 aaPredicted RBP34.95■■■■□ 3.19
HLA-C-207ENST00000484378 UQCRFS1P1P0C7P4 283 aa34.94■■■■□ 3.18
HLA-C-207ENST00000484378 ATRNL1Q5VV63 1379 aa34.93■■■■□ 3.18
HLA-C-207ENST00000484378 SURF6O75683 361 aaKnown RBP34.93■■■■□ 3.18
HLA-C-207ENST00000484378 MCAMP43121 646 aa34.93■■■■□ 3.18
HLA-C-207ENST00000484378 GSTO1P78417 241 aa34.93■■■■□ 3.18
HLA-C-207ENST00000484378 PICALMQ13492 652 aa34.93■■■■□ 3.18
HLA-C-207ENST00000484378 TBC1D9Q6ZT07 1266 aa34.93■■■■□ 3.18
HLA-C-207ENST00000484378 ZCCHC17Q9NP64 241 aaKnown RBP34.93■■■■□ 3.18
HLA-C-207ENST00000484378 GPR108Q9NPR9 543 aa34.93■■■■□ 3.18
HLA-C-207ENST00000484378 BTBD19C9JJ37 291 aa34.92■■■■□ 3.18
HLA-C-207ENST00000484378 ZBTB7BO15156 539 aaPredicted RBP34.92■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms