RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 ANKRD44Q8N8A2 993 aa12.43□□□□□ -0.42
CPSF4-213ENST00000484112 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.43□□□□□ -0.42
CPSF4-213ENST00000484112 TBC1D22AQ8WUA7 517 aa12.43□□□□□ -0.42
CPSF4-213ENST00000484112 RIPOR2Q9Y4F9 1068 aa12.43□□□□□ -0.42
CPSF4-213ENST00000484112 SNCAIPQ9Y6H5 919 aa12.43□□□□□ -0.42
CPSF4-213ENST00000484112 OTOFQ9HC10 1997 aa12.43□□□□□ -0.42
CPSF4-213ENST00000484112 IRF6O14896 467 aa12.42□□□□□ -0.42
CPSF4-213ENST00000484112 BCAMP50895 628 aa12.42□□□□□ -0.42
CPSF4-213ENST00000484112 LACTBP83111 547 aaPredicted RBP12.42□□□□□ -0.42
CPSF4-213ENST00000484112 SNAPC2Q13487 334 aa12.42□□□□□ -0.42
CPSF4-213ENST00000484112 MTX1Q13505 466 aa12.42□□□□□ -0.42
CPSF4-213ENST00000484112 MIGA2Q7L4E1 593 aa12.42□□□□□ -0.42
CPSF4-213ENST00000484112 CHMP4BQ9H444 224 aaKnown RBP12.42□□□□□ -0.42
CPSF4-213ENST00000484112 KIAA0100Q14667 2235 aaKnown RBP12.42□□□□□ -0.42
CPSF4-213ENST00000484112 LAMB1P07942 1786 aa12.41□□□□□ -0.42
CPSF4-213ENST00000484112 H0YGN5 161 aa12.41□□□□□ -0.42
CPSF4-213ENST00000484112 HDLBPQ00341 1268 aaKnown RBP12.41□□□□□ -0.42
CPSF4-213ENST00000484112 HOOK2Q96ED9 719 aa12.41□□□□□ -0.42
CPSF4-213ENST00000484112 CPA4Q9UI42 421 aa12.41□□□□□ -0.42
CPSF4-213ENST00000484112 RBBP6Q7Z6E9 1792 aaKnown RBP12.41□□□□□ -0.42
CPSF4-213ENST00000484112 PDE8BO95263 885 aa12.4□□□□□ -0.42
CPSF4-213ENST00000484112 GNAI2P04899 355 aa12.4□□□□□ -0.42
CPSF4-213ENST00000484112 PPIL2Q13356 520 aa12.4□□□□□ -0.42
CPSF4-213ENST00000484112 DCAF15Q66K64 600 aa12.4□□□□□ -0.42
CPSF4-213ENST00000484112 APOBEC3HQ6NTF7 200 aaKnown RBP12.4□□□□□ -0.42
CPSF4-213ENST00000484112 TMEM57Q8N5G2 664 aa12.4□□□□□ -0.42
CPSF4-213ENST00000484112 KLHDC4Q8TBB5 520 aa12.4□□□□□ -0.42
CPSF4-213ENST00000484112 DPF3Q92784 378 aa12.4□□□□□ -0.42
CPSF4-213ENST00000484112 CLUAP1Q96AJ1 413 aa12.4□□□□□ -0.42
CPSF4-213ENST00000484112 ZDHHC15Q96MV8 337 aa12.4□□□□□ -0.42
CPSF4-213ENST00000484112 MEIS3Q99687 375 aa12.4□□□□□ -0.42
CPSF4-213ENST00000484112 ZNF341Q9BYN7 854 aa12.4□□□□□ -0.42
CPSF4-213ENST00000484112 CIAO1O76071 339 aa12.39□□□□□ -0.43
CPSF4-213ENST00000484112 FMNL1O95466 1100 aaPredicted RBP12.39□□□□□ -0.43
CPSF4-213ENST00000484112 INPP5BP32019 993 aa12.39□□□□□ -0.43
CPSF4-213ENST00000484112 PSMC4P43686 418 aa12.39□□□□□ -0.43
CPSF4-213ENST00000484112 TCP10Q12799 353 aa12.39□□□□□ -0.43
CPSF4-213ENST00000484112 PDE3AQ14432 1141 aa12.39□□□□□ -0.43
CPSF4-213ENST00000484112 MTFR1Q15390 333 aa12.39□□□□□ -0.43
CPSF4-213ENST00000484112 FAM83AQ86UY5 434 aa12.39□□□□□ -0.43
CPSF4-213ENST00000484112 ZCCHC17Q9NP64 241 aaKnown RBP12.39□□□□□ -0.43
CPSF4-213ENST00000484112 COPRSQ9NQ92 184 aa12.39□□□□□ -0.43
CPSF4-213ENST00000484112 LRRFIP2Q9Y608 721 aaKnown RBP12.39□□□□□ -0.43
CPSF4-213ENST00000484112 MAST3O60307 1309 aa12.38□□□□□ -0.43
CPSF4-213ENST00000484112 EYA2O00167 538 aa12.38□□□□□ -0.43
CPSF4-213ENST00000484112 PDHXO00330 501 aa12.38□□□□□ -0.43
CPSF4-213ENST00000484112 ZBTB7BO15156 539 aaPredicted RBP12.38□□□□□ -0.43
CPSF4-213ENST00000484112 GNRH1P01148 92 aa12.38□□□□□ -0.43
CPSF4-213ENST00000484112 IFIT1P09914 478 aaKnown RBP12.38□□□□□ -0.43
CPSF4-213ENST00000484112 HOXD10P28358 340 aa12.38□□□□□ -0.43
CPSF4-213ENST00000484112 CTGFP29279 349 aa12.38□□□□□ -0.43
CPSF4-213ENST00000484112 RFX5P48382 616 aaPredicted RBP12.38□□□□□ -0.43
CPSF4-213ENST00000484112 PRMT2P55345 433 aa12.38□□□□□ -0.43
CPSF4-213ENST00000484112 PPATQ06203 517 aa12.38□□□□□ -0.43
CPSF4-213ENST00000484112 C17orf99Q6UX52 265 aa12.38□□□□□ -0.43
CPSF4-213ENST00000484112 CHRDL2Q6WN34 429 aa12.38□□□□□ -0.43
CPSF4-213ENST00000484112 RAET1EQ8TD07 263 aa12.38□□□□□ -0.43
CPSF4-213ENST00000484112 MRIQ9BWK5 157 aa12.38□□□□□ -0.43
CPSF4-213ENST00000484112 BIN2Q9UBW5 565 aaPredicted RBP12.38□□□□□ -0.43
CPSF4-213ENST00000484112 ARAP2Q8WZ64 1704 aa12.37□□□□□ -0.43
CPSF4-213ENST00000484112 ZSWIM8A7E2V4 1837 aa12.37□□□□□ -0.43
CPSF4-213ENST00000484112 OSBPP22059 807 aa12.37□□□□□ -0.43
CPSF4-213ENST00000484112 FKBP1CQ5VVH2 108 aa12.37□□□□□ -0.43
CPSF4-213ENST00000484112 HHIPL2Q6UWX4 724 aa12.37□□□□□ -0.43
CPSF4-213ENST00000484112 ANKRD23Q86SG2 305 aa12.37□□□□□ -0.43
CPSF4-213ENST00000484112 ITPRIPQ8IWB1 547 aa12.37□□□□□ -0.43
CPSF4-213ENST00000484112 VGLL2Q8N8G2 317 aa12.37□□□□□ -0.43
CPSF4-213ENST00000484112 TRIM47Q96LD4 638 aa12.37□□□□□ -0.43
CPSF4-213ENST00000484112 SRRDQ9UH36 339 aa12.37□□□□□ -0.43
CPSF4-213ENST00000484112 DDX19BQ9UMR2 479 aa12.37□□□□□ -0.43
CPSF4-213ENST00000484112 SRGAP3O43295 1099 aa12.36□□□□□ -0.43
CPSF4-213ENST00000484112 RLBP1P12271 317 aa12.36□□□□□ -0.43
CPSF4-213ENST00000484112 GRK4P32298 578 aa12.36□□□□□ -0.43
CPSF4-213ENST00000484112 IL15P40933 162 aaPredicted RBP12.36□□□□□ -0.43
CPSF4-213ENST00000484112 PUM3Q15397 648 aaKnown RBP12.36□□□□□ -0.43
CPSF4-213ENST00000484112 FAM151AQ8WW52 585 aa12.36□□□□□ -0.43
CPSF4-213ENST00000484112 TNNQ9UQP3 1299 aa12.36□□□□□ -0.43
CPSF4-213ENST00000484112 SUGT1Q9Y2Z0 365 aa12.36□□□□□ -0.43
CPSF4-213ENST00000484112 MYPNQ86TC9 1320 aa12.36□□□□□ -0.43
CPSF4-213ENST00000484112 ZBTB22O15209 634 aa12.35□□□□□ -0.43
CPSF4-213ENST00000484112 SLC5A1P13866 664 aa12.35□□□□□ -0.43
CPSF4-213ENST00000484112 MVPQ14764 893 aaKnown RBP12.35□□□□□ -0.43
CPSF4-213ENST00000484112 DIXDC1Q155Q3 683 aa12.35□□□□□ -0.43
CPSF4-213ENST00000484112 CDC42EP5Q6NZY7 148 aa12.35□□□□□ -0.43
CPSF4-213ENST00000484112 NKX2-3Q8TAU0 364 aa12.35□□□□□ -0.43
CPSF4-213ENST00000484112 WDR66Q8TBY9 1149 aa12.35□□□□□ -0.43
CPSF4-213ENST00000484112 SHISA4Q96DD7 197 aa12.35□□□□□ -0.43
CPSF4-213ENST00000484112 RNF208Q9H0X6 261 aa12.35□□□□□ -0.43
CPSF4-213ENST00000484112 CYP2C8P10632 490 aa12.34□□□□□ -0.43
CPSF4-213ENST00000484112 CCL5P13501 91 aa12.34□□□□□ -0.43
CPSF4-213ENST00000484112 FGFR2P21802 821 aa12.34□□□□□ -0.43
CPSF4-213ENST00000484112 UBXN2AP68543 259 aa12.34□□□□□ -0.43
CPSF4-213ENST00000484112 NFIAQ12857 509 aa12.34□□□□□ -0.43
CPSF4-213ENST00000484112 USP40Q9NVE5 1235 aa12.34□□□□□ -0.43
CPSF4-213ENST00000484112 RBM27Q9P2N5 1060 aaKnown RBP12.34□□□□□ -0.43
CPSF4-213ENST00000484112 KCNH4Q9UQ05 1017 aa12.34□□□□□ -0.43
CPSF4-213ENST00000484112 DAGLAQ9Y4D2 1042 aa12.34□□□□□ -0.43
CPSF4-213ENST00000484112 RPAP1Q9BWH6 1393 aaPredicted RBP12.33□□□□□ -0.44
CPSF4-213ENST00000484112 GJB1P08034 283 aa12.33□□□□□ -0.44
CPSF4-213ENST00000484112 PRDX5P30044 214 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms