RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 LDHCP07864 332 aa16.74■□□□□ 0.27
SMAD9-204ENST00000483941 PDE6AP16499 860 aa16.74■□□□□ 0.27
SMAD9-204ENST00000483941 ANP32AP39687 249 aaKnown RBP16.74■□□□□ 0.27
SMAD9-204ENST00000483941 RBM25P49756 843 aaKnown RBP16.74■□□□□ 0.27
SMAD9-204ENST00000483941 AOC3Q16853 763 aa16.74■□□□□ 0.27
SMAD9-204ENST00000483941 FAM227BQ96M60 508 aa16.74■□□□□ 0.27
SMAD9-204ENST00000483941 GLIS2Q9BZE0 524 aaPredicted RBP16.74■□□□□ 0.27
SMAD9-204ENST00000483941 RBM19Q9Y4C8 960 aaKnown RBP16.74■□□□□ 0.27
SMAD9-204ENST00000483941 CCDC171Q6TFL3 1326 aa16.73■□□□□ 0.27
SMAD9-204ENST00000483941 A0A0D9SFI3 127 aa16.73■□□□□ 0.27
SMAD9-204ENST00000483941 GNAT2P19087 354 aa16.73■□□□□ 0.27
SMAD9-204ENST00000483941 FKBP1AP62942 108 aaKnown RBP16.73■□□□□ 0.27
SMAD9-204ENST00000483941 RNF20Q5VTR2 975 aa16.73■□□□□ 0.27
SMAD9-204ENST00000483941 CIAPIN1Q6FI81 312 aa16.73■□□□□ 0.27
SMAD9-204ENST00000483941 NAA16Q6N069 864 aaPredicted RBP16.73■□□□□ 0.27
SMAD9-204ENST00000483941 DZIP1Q86YF9 867 aaKnown RBP16.73■□□□□ 0.27
SMAD9-204ENST00000483941 MAGEB6Q8N7X4 407 aa16.73■□□□□ 0.27
SMAD9-204ENST00000483941 ZNF408Q9H9D4 720 aa16.73■□□□□ 0.27
SMAD9-204ENST00000483941 MAST3O60307 1309 aa16.72■□□□□ 0.27
SMAD9-204ENST00000483941 ZNF532Q9HCE3 1301 aa16.72■□□□□ 0.27
SMAD9-204ENST00000483941 AKAP11Q9UKA4 1901 aa16.72■□□□□ 0.27
SMAD9-204ENST00000483941 GMPSP49915 693 aaPredicted RBP16.72■□□□□ 0.27
SMAD9-204ENST00000483941 ANAPC15P60006 121 aa16.72■□□□□ 0.27
SMAD9-204ENST00000483941 TTLL5Q6EMB2 1281 aa16.72■□□□□ 0.27
SMAD9-204ENST00000483941 NOL10Q9BSC4 688 aaKnown RBP16.72■□□□□ 0.27
SMAD9-204ENST00000483941 CTNNA3Q9UI47 895 aa16.72■□□□□ 0.27
SMAD9-204ENST00000483941 CYP7A1P22680 504 aa16.71■□□□□ 0.27
SMAD9-204ENST00000483941 CXCL9Q07325 125 aa16.71■□□□□ 0.27
SMAD9-204ENST00000483941 MFSD14BQ5SR56 506 aa16.71■□□□□ 0.27
SMAD9-204ENST00000483941 STRIP1Q5VSL9 837 aa16.71■□□□□ 0.27
SMAD9-204ENST00000483941 DSCC1Q9BVC3 393 aa16.71■□□□□ 0.27
SMAD9-204ENST00000483941 LSG1Q9H089 658 aaKnown RBP16.71■□□□□ 0.27
SMAD9-204ENST00000483941 U3KPZ7 1027 aaPredicted RBP16.71■□□□□ 0.27
SMAD9-204ENST00000483941 RPAP1Q9BWH6 1393 aaPredicted RBP16.7■□□□□ 0.26
SMAD9-204ENST00000483941 TCRBV5S4A2TA0A5A2 114 aa16.7■□□□□ 0.26
SMAD9-204ENST00000483941 ECE2O60344 883 aa16.7■□□□□ 0.26
SMAD9-204ENST00000483941 BAG3O95817 575 aa16.7■□□□□ 0.26
SMAD9-204ENST00000483941 ZKSCAN1P17029 563 aaPredicted RBP16.7■□□□□ 0.26
SMAD9-204ENST00000483941 GTF2IP78347 998 aa16.7■□□□□ 0.26
SMAD9-204ENST00000483941 NOGQ13253 232 aa16.7■□□□□ 0.26
SMAD9-204ENST00000483941 DOK7Q18PE1 504 aa16.7■□□□□ 0.26
SMAD9-204ENST00000483941 MAP4K1Q92918 833 aa16.7■□□□□ 0.26
SMAD9-204ENST00000483941 PGAP2Q9UHJ9 254 aa16.7■□□□□ 0.26
SMAD9-204ENST00000483941 ZNRF3Q9ULT6 936 aa16.7■□□□□ 0.26
SMAD9-204ENST00000483941 USP17L3A6NCW0 530 aa16.69■□□□□ 0.26
SMAD9-204ENST00000483941 USP17L4A6NCW7 530 aa16.69■□□□□ 0.26
SMAD9-204ENST00000483941 USP17L1Q7RTZ2 530 aa16.69■□□□□ 0.26
SMAD9-204ENST00000483941 ZC3H15Q8WU90 426 aaKnown RBP16.69■□□□□ 0.26
SMAD9-204ENST00000483941 OSBP2Q969R2 916 aa16.69■□□□□ 0.26
SMAD9-204ENST00000483941 NSUN4Q96CB9 384 aaKnown RBP16.69■□□□□ 0.26
SMAD9-204ENST00000483941 DDRGK1Q96HY6 314 aa16.69■□□□□ 0.26
SMAD9-204ENST00000483941 NACAP1Q9BZK3 213 aa16.69■□□□□ 0.26
SMAD9-204ENST00000483941 MYO3BQ8WXR4 1341 aa16.69■□□□□ 0.26
SMAD9-204ENST00000483941 COL1A1P02452 1464 aaPredicted RBP16.68■□□□□ 0.26
SMAD9-204ENST00000483941 MAGEB6P1A0A0J9YX57 407 aa16.68■□□□□ 0.26
SMAD9-204ENST00000483941 GPAA1O43292 621 aa16.68■□□□□ 0.26
SMAD9-204ENST00000483941 PLCG2P16885 1265 aa16.68■□□□□ 0.26
SMAD9-204ENST00000483941 HSPA4P34932 840 aa16.68■□□□□ 0.26
SMAD9-204ENST00000483941 MMP14P50281 582 aa16.68■□□□□ 0.26
SMAD9-204ENST00000483941 MECOMQ03112 1051 aa16.68■□□□□ 0.26
SMAD9-204ENST00000483941 TRPM4Q8TD43 1214 aa16.68■□□□□ 0.26
SMAD9-204ENST00000483941 FBXW7Q969H0 707 aa16.68■□□□□ 0.26
SMAD9-204ENST00000483941 MRIQ9BWK5 157 aa16.68■□□□□ 0.26
SMAD9-204ENST00000483941 DBNDD1Q9H9R9 158 aa16.68■□□□□ 0.26
SMAD9-204ENST00000483941 HUNKP57058 714 aa16.67■□□□□ 0.26
SMAD9-204ENST00000483941 KRT32Q14532 448 aa16.67■□□□□ 0.26
SMAD9-204ENST00000483941 CDC37L1Q7L3B6 337 aa16.67■□□□□ 0.26
SMAD9-204ENST00000483941 FAM163AQ96GL9 167 aaPredicted RBP16.67■□□□□ 0.26
SMAD9-204ENST00000483941 ZIC5Q96T25 663 aa16.67■□□□□ 0.26
SMAD9-204ENST00000483941 SEC62Q99442 399 aaKnown RBP16.67■□□□□ 0.26
SMAD9-204ENST00000483941 PUS7LQ9H0K6 701 aaKnown RBP16.67■□□□□ 0.26
SMAD9-204ENST00000483941 POLR2AP24928 1970 aaKnown RBP16.66■□□□□ 0.26
SMAD9-204ENST00000483941 PATL2C9JE40 543 aaKnown RBP16.66■□□□□ 0.26
SMAD9-204ENST00000483941 M0R2C6 588 aa16.66■□□□□ 0.26
SMAD9-204ENST00000483941 HSPD1P10809 573 aaKnown RBP16.66■□□□□ 0.26
SMAD9-204ENST00000483941 PRDX5P30044 214 aa16.66■□□□□ 0.26
SMAD9-204ENST00000483941 HIRAP54198 1017 aaPredicted RBP16.66■□□□□ 0.26
SMAD9-204ENST00000483941 SOX10P56693 466 aa16.66■□□□□ 0.26
SMAD9-204ENST00000483941 HDLBPQ00341 1268 aaKnown RBP16.66■□□□□ 0.26
SMAD9-204ENST00000483941 RABEP1Q15276 862 aa16.66■□□□□ 0.26
SMAD9-204ENST00000483941 ZNF589Q86UQ0 364 aaPredicted RBP16.66■□□□□ 0.26
SMAD9-204ENST00000483941 STRBPQ96SI9 672 aaKnown RBP16.66■□□□□ 0.26
SMAD9-204ENST00000483941 RBM8AQ9Y5S9 174 aaKnown RBP16.66■□□□□ 0.26
SMAD9-204ENST00000483941 RAD17O75943 681 aa16.65■□□□□ 0.26
SMAD9-204ENST00000483941 MBD4O95243 580 aa16.65■□□□□ 0.26
SMAD9-204ENST00000483941 APPP05067 770 aa16.65■□□□□ 0.26
SMAD9-204ENST00000483941 TNIP1Q15025 636 aa16.65■□□□□ 0.26
SMAD9-204ENST00000483941 IL17RAQ96F46 866 aa16.65■□□□□ 0.26
SMAD9-204ENST00000483941 CRNKL1Q9BZJ0 848 aaKnown RBP16.65■□□□□ 0.26
SMAD9-204ENST00000483941 IL25Q9H293 177 aa16.65■□□□□ 0.26
SMAD9-204ENST00000483941 SAGE1Q9NXZ1 904 aa16.65■□□□□ 0.26
SMAD9-204ENST00000483941 JAG2Q9Y219 1238 aa16.65■□□□□ 0.26
SMAD9-204ENST00000483941 MYH13Q9UKX3 1938 aa16.64■□□□□ 0.26
SMAD9-204ENST00000483941 PSMA5P28066 241 aa16.64■□□□□ 0.25
SMAD9-204ENST00000483941 PPP4CP60510 307 aa16.64■□□□□ 0.25
SMAD9-204ENST00000483941 PTH1RQ03431 593 aa16.64■□□□□ 0.25
SMAD9-204ENST00000483941 BECN1Q14457 450 aa16.64■□□□□ 0.25
SMAD9-204ENST00000483941 NECTIN1Q15223 517 aa16.64■□□□□ 0.25
SMAD9-204ENST00000483941 ALX1Q15699 326 aa16.64■□□□□ 0.25
SMAD9-204ENST00000483941 IMMTQ16891 758 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms