RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 NBPF12Q5TAG4 269 aaPredicted RBP32.33■■■□□ 2.77
GTF3C4-202ENST00000483873 CYP4F22Q6NT55 531 aa32.33■■■□□ 2.77
GTF3C4-202ENST00000483873 TMEM39BQ9GZU3 492 aa32.33■■■□□ 2.77
GTF3C4-202ENST00000483873 USP40Q9NVE5 1235 aa32.33■■■□□ 2.77
GTF3C4-202ENST00000483873 FZD1Q9UP38 647 aa32.33■■■□□ 2.77
GTF3C4-202ENST00000483873 NF2P35240 595 aa32.32■■■□□ 2.76
GTF3C4-202ENST00000483873 BTDP43251 543 aa32.32■■■□□ 2.76
GTF3C4-202ENST00000483873 PRKG1Q13976 671 aa32.32■■■□□ 2.76
GTF3C4-202ENST00000483873 PPIL4Q8WUA2 492 aaKnown RBP eCLIP32.32■■■□□ 2.76
GTF3C4-202ENST00000483873 TNNI2P48788 182 aa32.31■■■□□ 2.76
GTF3C4-202ENST00000483873 TEPSINQ96N21 525 aa32.31■■■□□ 2.76
GTF3C4-202ENST00000483873 DNAJC2Q99543 621 aaKnown RBP32.31■■■□□ 2.76
GTF3C4-202ENST00000483873 GSTO1P78417 241 aa32.3■■■□□ 2.76
GTF3C4-202ENST00000483873 NFIAQ12857 509 aa32.3■■■□□ 2.76
GTF3C4-202ENST00000483873 GRM1Q13255 1194 aa32.3■■■□□ 2.76
GTF3C4-202ENST00000483873 FKBP1CQ5VVH2 108 aa32.3■■■□□ 2.76
GTF3C4-202ENST00000483873 BOLA2Q9H3K6 86 aa32.3■■■□□ 2.76
GTF3C4-202ENST00000483873 AK9Q5TCS8 1911 aa32.3■■■□□ 2.76
GTF3C4-202ENST00000483873 GPR75-ASB3A0A0A6YYF3 556 aa32.29■■■□□ 2.76
GTF3C4-202ENST00000483873 IDH1O75874 414 aaKnown RBP32.29■■■□□ 2.76
GTF3C4-202ENST00000483873 ATP5JP18859 108 aa32.29■■■□□ 2.76
GTF3C4-202ENST00000483873 TTLL12Q14166 644 aaPredicted RBP32.29■■■□□ 2.76
GTF3C4-202ENST00000483873 NAA16Q6N069 864 aaPredicted RBP32.29■■■□□ 2.76
GTF3C4-202ENST00000483873 EDC3Q96F86 508 aaKnown RBP32.29■■■□□ 2.76
GTF3C4-202ENST00000483873 CDK5RAP2Q96SN8 1893 aa32.28■■■□□ 2.76
GTF3C4-202ENST00000483873 LDHCP07864 332 aa32.28■■■□□ 2.76
GTF3C4-202ENST00000483873 FKBP1BP68106 108 aa32.28■■■□□ 2.76
GTF3C4-202ENST00000483873 FAM83AQ86UY5 434 aa32.28■■■□□ 2.76
GTF3C4-202ENST00000483873 HHIPL1Q96JK4 782 aa32.28■■■□□ 2.76
GTF3C4-202ENST00000483873 CAPNS2Q96L46 248 aa32.28■■■□□ 2.76
GTF3C4-202ENST00000483873 THSD7BQ9C0I4 1608 aa32.28■■■□□ 2.76
GTF3C4-202ENST00000483873 WDR33Q9C0J8 1336 aaKnown RBP32.28■■■□□ 2.76
GTF3C4-202ENST00000483873 RFX7Q2KHR2 1363 aa32.27■■■□□ 2.76
GTF3C4-202ENST00000483873 UBE2Q2LH0YL09 131 aa32.27■■■□□ 2.76
GTF3C4-202ENST00000483873 IGHDP01880 384 aa32.27■■■□□ 2.76
GTF3C4-202ENST00000483873 ADGRA1Q86SQ6 560 aa32.27■■■□□ 2.76
GTF3C4-202ENST00000483873 GCC1Q96CN9 775 aa32.27■■■□□ 2.76
GTF3C4-202ENST00000483873 FAM198AQ9UFP1 575 aa32.27■■■□□ 2.76
GTF3C4-202ENST00000483873 OTOFQ9HC10 1997 aa32.27■■■□□ 2.76
GTF3C4-202ENST00000483873 GOLIM4O00461 696 aa32.26■■■□□ 2.76
GTF3C4-202ENST00000483873 TCP10Q12799 353 aa32.26■■■□□ 2.76
GTF3C4-202ENST00000483873 SUPT20HL1Q3ZLR7 823 aa32.26■■■□□ 2.76
GTF3C4-202ENST00000483873 TSHZ3Q63HK5 1081 aa32.26■■■□□ 2.76
GTF3C4-202ENST00000483873 OTUD7AQ8TE49 926 aaPredicted RBP32.26■■■□□ 2.76
GTF3C4-202ENST00000483873 MYH7P12883 1935 aa32.26■■■□□ 2.75
GTF3C4-202ENST00000483873 RHBDL3P58872 404 aa32.26■■■□□ 2.75
GTF3C4-202ENST00000483873 ANKRD45Q5TZF3 282 aa32.26■■■□□ 2.75
GTF3C4-202ENST00000483873 RWDD1Q9H446 243 aaPredicted RBP32.26■■■□□ 2.75
GTF3C4-202ENST00000483873 ECHDC1Q9NTX5 307 aa32.26■■■□□ 2.75
GTF3C4-202ENST00000483873 RGMBQ6NW40 437 aa32.25■■■□□ 2.75
GTF3C4-202ENST00000483873 ANGEL1Q9UNK9 670 aaKnown RBP32.25■■■□□ 2.75
GTF3C4-202ENST00000483873 MAGEB6Q8N7X4 407 aa32.24■■■□□ 2.75
GTF3C4-202ENST00000483873 HAUS7Q99871 368 aa32.24■■■□□ 2.75
GTF3C4-202ENST00000483873 RPAP1Q9BWH6 1393 aaPredicted RBP32.23■■■□□ 2.75
GTF3C4-202ENST00000483873 FOCADQ5VW36 1801 aa32.23■■■□□ 2.75
GTF3C4-202ENST00000483873 WDHD1O75717 1129 aaPredicted RBP32.23■■■□□ 2.75
GTF3C4-202ENST00000483873 ECE1P42892 770 aa32.23■■■□□ 2.75
GTF3C4-202ENST00000483873 RGS3P49796 1198 aa32.23■■■□□ 2.75
GTF3C4-202ENST00000483873 TTF1Q15361 905 aaPredicted RBP32.23■■■□□ 2.75
GTF3C4-202ENST00000483873 ARMC9Q7Z3E5 817 aa32.23■■■□□ 2.75
GTF3C4-202ENST00000483873 ZFPM1Q8IX07 1006 aa32.23■■■□□ 2.75
GTF3C4-202ENST00000483873 FAM151AQ8WW52 585 aa32.23■■■□□ 2.75
GTF3C4-202ENST00000483873 DDX4Q9NQI0 724 aaKnown RBP32.23■■■□□ 2.75
GTF3C4-202ENST00000483873 PAG1Q9NWQ8 432 aa32.23■■■□□ 2.75
GTF3C4-202ENST00000483873 AATFQ9NY61 560 aaKnown RBP eCLIP32.23■■■□□ 2.75
GTF3C4-202ENST00000483873 AOC2O75106 756 aa32.22■■■□□ 2.75
GTF3C4-202ENST00000483873 CYP7A1P22680 504 aa32.22■■■□□ 2.75
GTF3C4-202ENST00000483873 MAP3K12Q12852 859 aa32.22■■■□□ 2.75
GTF3C4-202ENST00000483873 IDI2Q9BXS1 227 aa32.22■■■□□ 2.75
GTF3C4-202ENST00000483873 ZNF157P51786 506 aaPredicted RBP32.21■■■□□ 2.75
GTF3C4-202ENST00000483873 SMC5Q8IY18 1101 aa32.21■■■□□ 2.75
GTF3C4-202ENST00000483873 PPP1R12BO60237 982 aaPredicted RBP32.2■■■□□ 2.75
GTF3C4-202ENST00000483873 IGSF3O75054 1194 aa32.2■■■□□ 2.75
GTF3C4-202ENST00000483873 PICALMQ13492 652 aa32.2■■■□□ 2.75
GTF3C4-202ENST00000483873 SH3RF3Q8TEJ3 882 aaPredicted RBP32.2■■■□□ 2.75
GTF3C4-202ENST00000483873 GPATCH3Q96I76 525 aa32.2■■■□□ 2.75
GTF3C4-202ENST00000483873 USP2O75604 605 aaPredicted RBP32.19■■■□□ 2.74
GTF3C4-202ENST00000483873 NOL10Q9BSC4 688 aaKnown RBP32.19■■■□□ 2.74
GTF3C4-202ENST00000483873 FAM155AB1AL88 458 aaPredicted RBP32.18■■■□□ 2.74
GTF3C4-202ENST00000483873 MAP3K11Q16584 847 aa32.18■■■□□ 2.74
GTF3C4-202ENST00000483873 LDLRAD1Q5T700 205 aa32.18■■■□□ 2.74
GTF3C4-202ENST00000483873 B4GALNT3Q6L9W6 998 aa32.18■■■□□ 2.74
GTF3C4-202ENST00000483873 ZBTB47Q9UFB7 747 aaPredicted RBP32.18■■■□□ 2.74
GTF3C4-202ENST00000483873 SALL3Q9BXA9 1300 aa32.18■■■□□ 2.74
GTF3C4-202ENST00000483873 ENTPD3O75355 529 aa32.17■■■□□ 2.74
GTF3C4-202ENST00000483873 DYNLL1P63167 89 aaKnown RBP32.17■■■□□ 2.74
GTF3C4-202ENST00000483873 RASAL3Q86YV0 1011 aa32.17■■■□□ 2.74
GTF3C4-202ENST00000483873 MIGA1Q8NAN2 632 aa32.17■■■□□ 2.74
GTF3C4-202ENST00000483873 PDE6AP16499 860 aa32.17■■■□□ 2.74
GTF3C4-202ENST00000483873 PPP4CP60510 307 aa32.17■■■□□ 2.74
GTF3C4-202ENST00000483873 TEX11Q8IYF3 940 aa32.17■■■□□ 2.74
GTF3C4-202ENST00000483873 ZIC5Q96T25 663 aa32.17■■■□□ 2.74
GTF3C4-202ENST00000483873 BAG3O95817 575 aa32.16■■■□□ 2.74
GTF3C4-202ENST00000483873 SLC10A3P09131 477 aa32.16■■■□□ 2.74
GTF3C4-202ENST00000483873 SLC9C2Q5TAH2 1124 aa32.16■■■□□ 2.74
GTF3C4-202ENST00000483873 IFFO2Q5TF58 517 aa32.16■■■□□ 2.74
GTF3C4-202ENST00000483873 SH3BP5LQ7L8J4 393 aa32.16■■■□□ 2.74
GTF3C4-202ENST00000483873 CLMNQ96JQ2 1002 aa32.16■■■□□ 2.74
GTF3C4-202ENST00000483873 LNPKQ9C0E8 428 aa32.16■■■□□ 2.74
GTF3C4-202ENST00000483873 ZBTB4Q9P1Z0 1013 aaPredicted RBP32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms