RNA–Protein interactions for RNA: ENST00000483683.1

COL4A2-208, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-208ENST00000483683 CLMNQ96JQ2 1002 aa18.21■□□□□ 0.51
COL4A2-208ENST00000483683 TMOD2Q9NZR1 351 aa18.21■□□□□ 0.51
COL4A2-208ENST00000483683 EXOC6BQ9Y2D4 811 aa18.21■□□□□ 0.51
COL4A2-208ENST00000483683 IREB2P48200 963 aaKnown RBP18.2■□□□□ 0.5
COL4A2-208ENST00000483683 SPRYD7Q5W111 196 aa18.2■□□□□ 0.5
COL4A2-208ENST00000483683 TBC1D9Q6ZT07 1266 aa18.2■□□□□ 0.5
COL4A2-208ENST00000483683 TNS4Q8IZW8 715 aa18.2■□□□□ 0.5
COL4A2-208ENST00000483683 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.2■□□□□ 0.5
COL4A2-208ENST00000483683 SLC10A4Q96EP9 437 aa18.2■□□□□ 0.5
COL4A2-208ENST00000483683 ZNF512BQ96KM6 892 aaPredicted RBP18.2■□□□□ 0.5
COL4A2-208ENST00000483683 RNF186Q9NXI6 227 aa18.2■□□□□ 0.5
COL4A2-208ENST00000483683 DBNLQ9UJU6 430 aaKnown RBP18.2■□□□□ 0.5
COL4A2-208ENST00000483683 TM4SF4P48230 202 aa18.19■□□□□ 0.5
COL4A2-208ENST00000483683 NFIAQ12857 509 aa18.19■□□□□ 0.5
COL4A2-208ENST00000483683 ERICH6Q7L0X2 663 aa18.19■□□□□ 0.5
COL4A2-208ENST00000483683 CCDC8Q9H0W5 538 aaPredicted RBP18.19■□□□□ 0.5
COL4A2-208ENST00000483683 CHMP4BQ9H444 224 aaKnown RBP18.19■□□□□ 0.5
COL4A2-208ENST00000483683 SAGE1Q9NXZ1 904 aa18.19■□□□□ 0.5
COL4A2-208ENST00000483683 TLR7Q9NYK1 1049 aaKnown RBP18.19■□□□□ 0.5
COL4A2-208ENST00000483683 FAM198AQ9UFP1 575 aa18.19■□□□□ 0.5
COL4A2-208ENST00000483683 RPAP1Q9BWH6 1393 aaPredicted RBP18.18■□□□□ 0.5
COL4A2-208ENST00000483683 AKAP11Q9UKA4 1901 aa18.18■□□□□ 0.5
COL4A2-208ENST00000483683 MYH2Q9UKX2 1941 aa18.18■□□□□ 0.5
COL4A2-208ENST00000483683 MECOMQ03112 1051 aa18.18■□□□□ 0.5
COL4A2-208ENST00000483683 CCDC158Q5M9N0 1113 aa18.18■□□□□ 0.5
COL4A2-208ENST00000483683 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.18■□□□□ 0.5
COL4A2-208ENST00000483683 DZIP1Q86YF9 867 aaKnown RBP18.18■□□□□ 0.5
COL4A2-208ENST00000483683 ANKRD13AQ8IZ07 590 aa18.18■□□□□ 0.5
COL4A2-208ENST00000483683 FAM151AQ8WW52 585 aa18.18■□□□□ 0.5
COL4A2-208ENST00000483683 USP40Q9NVE5 1235 aa18.18■□□□□ 0.5
COL4A2-208ENST00000483683 TRPA1O75762 1119 aa18.17■□□□□ 0.5
COL4A2-208ENST00000483683 MKRN3Q13064 507 aaKnown RBP18.17■□□□□ 0.5
COL4A2-208ENST00000483683 TTC39AQ5SRH9 613 aa18.17■□□□□ 0.5
COL4A2-208ENST00000483683 ERC1Q8IUD2 1116 aa18.17■□□□□ 0.5
COL4A2-208ENST00000483683 SLF2Q8IX21 1173 aa18.17■□□□□ 0.5
COL4A2-208ENST00000483683 NSUN4Q96CB9 384 aaKnown RBP18.17■□□□□ 0.5
COL4A2-208ENST00000483683 WNK4Q96J92 1243 aa18.17■□□□□ 0.5
COL4A2-208ENST00000483683 SNRKQ9NRH2 765 aa18.17■□□□□ 0.5
COL4A2-208ENST00000483683 GPR75-ASB3A0A0A6YYF3 556 aa18.16■□□□□ 0.5
COL4A2-208ENST00000483683 HMMRO75330 724 aa18.16■□□□□ 0.5
COL4A2-208ENST00000483683 GJA5P36382 358 aa18.16■□□□□ 0.5
COL4A2-208ENST00000483683 HSP90AB4PQ58FF6 505 aa18.16■□□□□ 0.5
COL4A2-208ENST00000483683 ZFPM1Q8IX07 1006 aa18.16■□□□□ 0.5
COL4A2-208ENST00000483683 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.16■□□□□ 0.5
COL4A2-208ENST00000483683 RHPN1Q8TCX5 695 aa18.16■□□□□ 0.5
COL4A2-208ENST00000483683 IDI2Q9BXS1 227 aa18.16■□□□□ 0.5
COL4A2-208ENST00000483683 MROH7-TTC4A0A0A0MT08 1334 aa18.16■□□□□ 0.5
COL4A2-208ENST00000483683 RFX7Q2KHR2 1363 aa18.16■□□□□ 0.5
COL4A2-208ENST00000483683 CYP2E1P05181 493 aaPredicted RBP18.15■□□□□ 0.5
COL4A2-208ENST00000483683 ZBTB48P10074 688 aaPredicted RBP18.15■□□□□ 0.5
COL4A2-208ENST00000483683 RHBDL3P58872 404 aa18.15■□□□□ 0.5
COL4A2-208ENST00000483683 MAP3K9P80192 1104 aa18.15■□□□□ 0.5
COL4A2-208ENST00000483683 TCP10Q12799 353 aa18.15■□□□□ 0.5
COL4A2-208ENST00000483683 CASP8AP2Q9UKL3 1982 aa18.15■□□□□ 0.5
COL4A2-208ENST00000483683 OTOFQ9HC10 1997 aa18.14■□□□□ 0.49
COL4A2-208ENST00000483683 WDHD1O75717 1129 aaPredicted RBP18.14■□□□□ 0.49
COL4A2-208ENST00000483683 LDHCP07864 332 aa18.14■□□□□ 0.49
COL4A2-208ENST00000483683 BTDP43251 543 aa18.14■□□□□ 0.49
COL4A2-208ENST00000483683 ZAP70P43403 619 aa18.14■□□□□ 0.49
COL4A2-208ENST00000483683 IL1RAPL2Q9NP60 686 aa18.14■□□□□ 0.49
COL4A2-208ENST00000483683 RAI14Q9P0K7 980 aa18.14■□□□□ 0.49
COL4A2-208ENST00000483683 ENTPD3O75355 529 aa18.13■□□□□ 0.49
COL4A2-208ENST00000483683 RGS3P49796 1198 aa18.13■□□□□ 0.49
COL4A2-208ENST00000483683 SREBF2Q12772 1141 aa18.13■□□□□ 0.49
COL4A2-208ENST00000483683 VGLL4Q14135 290 aa18.13■□□□□ 0.49
COL4A2-208ENST00000483683 AACSQ86V21 672 aa18.13■□□□□ 0.49
COL4A2-208ENST00000483683 HOOK2Q96ED9 719 aa18.13■□□□□ 0.49
COL4A2-208ENST00000483683 KIF1BPQ96EK5 621 aa18.13■□□□□ 0.49
COL4A2-208ENST00000483683 ELP3Q9H9T3 547 aa18.13■□□□□ 0.49
COL4A2-208ENST00000483683 DDX4Q9NQI0 724 aaKnown RBP18.13■□□□□ 0.49
COL4A2-208ENST00000483683 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.13■□□□□ 0.49
COL4A2-208ENST00000483683 LRP2BPQ9P2M1 347 aa18.13■□□□□ 0.49
COL4A2-208ENST00000483683 MANSC4A6NHS7 340 aaPredicted RBP18.12■□□□□ 0.49
COL4A2-208ENST00000483683 RAB11FIP3O75154 756 aa18.12■□□□□ 0.49
COL4A2-208ENST00000483683 INHBEP58166 350 aa18.12■□□□□ 0.49
COL4A2-208ENST00000483683 GSTO1P78417 241 aa18.12■□□□□ 0.49
COL4A2-208ENST00000483683 MIGA2Q7L4E1 593 aa18.12■□□□□ 0.49
COL4A2-208ENST00000483683 SH3BP5LQ7L8J4 393 aa18.12■□□□□ 0.49
COL4A2-208ENST00000483683 CNKSR2Q8WXI2 1034 aa18.12■□□□□ 0.49
COL4A2-208ENST00000483683 YTHDC1Q96MU7 727 aaKnown RBP18.12■□□□□ 0.49
COL4A2-208ENST00000483683 PIH1D3Q9NQM4 214 aaKnown RBP18.12■□□□□ 0.49
COL4A2-208ENST00000483683 ZNF112Q9UJU3 913 aa18.12■□□□□ 0.49
COL4A2-208ENST00000483683 IGSF3O75054 1194 aa18.11■□□□□ 0.49
COL4A2-208ENST00000483683 MAP4K4O95819 1239 aaPredicted RBP18.11■□□□□ 0.49
COL4A2-208ENST00000483683 DCAF15Q66K64 600 aa18.11■□□□□ 0.49
COL4A2-208ENST00000483683 CFHR5Q9BXR6 569 aa18.11■□□□□ 0.49
COL4A2-208ENST00000483683 SNCAIPQ9Y6H5 919 aa18.11■□□□□ 0.49
COL4A2-208ENST00000483683 ATRNL1Q5VV63 1379 aa18.11■□□□□ 0.49
COL4A2-208ENST00000483683 LAMB1P07942 1786 aa18.1■□□□□ 0.49
COL4A2-208ENST00000483683 TESPA1A2RU30 521 aaPredicted RBP18.1■□□□□ 0.49
COL4A2-208ENST00000483683 APBB1O00213 710 aa18.1■□□□□ 0.49
COL4A2-208ENST00000483683 NPM3O75607 178 aaKnown RBP18.1■□□□□ 0.49
COL4A2-208ENST00000483683 MAP3K10Q02779 954 aa18.1■□□□□ 0.49
COL4A2-208ENST00000483683 CLASRPQ8N2M8 674 aaKnown RBP18.1■□□□□ 0.49
COL4A2-208ENST00000483683 ZKSCAN4Q969J2 545 aaPredicted RBP18.1■□□□□ 0.49
COL4A2-208ENST00000483683 OPTNQ96CV9 577 aa18.1■□□□□ 0.49
COL4A2-208ENST00000483683 MS4A4AQ96JQ5 239 aa18.1■□□□□ 0.49
COL4A2-208ENST00000483683 WRNIP1Q96S55 665 aa18.1■□□□□ 0.49
COL4A2-208ENST00000483683 ZNF341Q9BYN7 854 aa18.1■□□□□ 0.49
COL4A2-208ENST00000483683 CSADQ9Y600 493 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms