RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 PAXIP1Q6ZW49 1069 aaPredicted RBP22.02■■□□□ 1.12
HDAC6-225ENST00000483506 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.02■■□□□ 1.12
HDAC6-225ENST00000483506 LRRCC1Q9C099 1032 aa22.02■■□□□ 1.12
HDAC6-225ENST00000483506 SNRKQ9NRH2 765 aa22.02■■□□□ 1.12
HDAC6-225ENST00000483506 MYO5AQ9Y4I1 1855 aaKnown RBP22.01■■□□□ 1.11
HDAC6-225ENST00000483506 IFIT2P09913 472 aaKnown RBP22.01■■□□□ 1.11
HDAC6-225ENST00000483506 ZAP70P43403 619 aa22.01■■□□□ 1.11
HDAC6-225ENST00000483506 GSTO1P78417 241 aa22.01■■□□□ 1.11
HDAC6-225ENST00000483506 NBPF12Q5TAG4 269 aaPredicted RBP22.01■■□□□ 1.11
HDAC6-225ENST00000483506 MOB2Q70IA6 237 aa22.01■■□□□ 1.11
HDAC6-225ENST00000483506 CCDC102AQ96A19 550 aa22.01■■□□□ 1.11
HDAC6-225ENST00000483506 GPR75-ASB3A0A0A6YYF3 556 aa22■■□□□ 1.11
HDAC6-225ENST00000483506 UNCXA6NJT0 531 aa22■■□□□ 1.11
HDAC6-225ENST00000483506 LDLRAD1Q5T700 205 aa22■■□□□ 1.11
HDAC6-225ENST00000483506 ARMC9Q7Z3E5 817 aa22■■□□□ 1.11
HDAC6-225ENST00000483506 IDI2Q9BXS1 227 aa22■■□□□ 1.11
HDAC6-225ENST00000483506 TMEM39BQ9GZU3 492 aa22■■□□□ 1.11
HDAC6-225ENST00000483506 LRP2BPQ9P2M1 347 aa22■■□□□ 1.11
HDAC6-225ENST00000483506 UBE2Q2LH0YL09 131 aa21.99■■□□□ 1.11
HDAC6-225ENST00000483506 PPP1R12BO60237 982 aaPredicted RBP21.99■■□□□ 1.11
HDAC6-225ENST00000483506 MAP4K4O95819 1239 aaPredicted RBP21.99■■□□□ 1.11
HDAC6-225ENST00000483506 LDHCP07864 332 aa21.99■■□□□ 1.11
HDAC6-225ENST00000483506 SLC10A3P09131 477 aa21.99■■□□□ 1.11
HDAC6-225ENST00000483506 NOGQ13253 232 aa21.99■■□□□ 1.11
HDAC6-225ENST00000483506 CDAN1Q8IWY9 1227 aa21.99■■□□□ 1.11
HDAC6-225ENST00000483506 PIH1D3Q9NQM4 214 aaKnown RBP21.99■■□□□ 1.11
HDAC6-225ENST00000483506 USP40Q9NVE5 1235 aa21.99■■□□□ 1.11
HDAC6-225ENST00000483506 RAI14Q9P0K7 980 aa21.99■■□□□ 1.11
HDAC6-225ENST00000483506 AOC2O75106 756 aa21.98■■□□□ 1.11
HDAC6-225ENST00000483506 BTDP43251 543 aa21.98■■□□□ 1.11
HDAC6-225ENST00000483506 ZNF157P51786 506 aaPredicted RBP21.98■■□□□ 1.11
HDAC6-225ENST00000483506 TTLL12Q14166 644 aaPredicted RBP21.98■■□□□ 1.11
HDAC6-225ENST00000483506 TMED8Q6PL24 325 aaPredicted RBP21.98■■□□□ 1.11
HDAC6-225ENST00000483506 RASAL3Q86YV0 1011 aa21.98■■□□□ 1.11
HDAC6-225ENST00000483506 FAM151AQ8WW52 585 aa21.98■■□□□ 1.11
HDAC6-225ENST00000483506 WBP1LQ9NX94 342 aa21.98■■□□□ 1.11
HDAC6-225ENST00000483506 RHBDL3P58872 404 aa21.97■■□□□ 1.11
HDAC6-225ENST00000483506 NFIAQ12857 509 aa21.97■■□□□ 1.11
HDAC6-225ENST00000483506 HDAC1Q13547 482 aaPredicted RBP21.97■■□□□ 1.11
HDAC6-225ENST00000483506 FAM198AQ9UFP1 575 aa21.97■■□□□ 1.11
HDAC6-225ENST00000483506 ANGEL1Q9UNK9 670 aaKnown RBP21.97■■□□□ 1.11
HDAC6-225ENST00000483506 SUPT16HQ9Y5B9 1047 aaKnown RBP21.97■■□□□ 1.11
HDAC6-225ENST00000483506 OTOFQ9HC10 1997 aa21.97■■□□□ 1.11
HDAC6-225ENST00000483506 USP2O75604 605 aaPredicted RBP21.96■■□□□ 1.11
HDAC6-225ENST00000483506 NPM3O75607 178 aaKnown RBP21.96■■□□□ 1.11
HDAC6-225ENST00000483506 HSPA1AP0DMV8 641 aaKnown RBP21.96■■□□□ 1.11
HDAC6-225ENST00000483506 HSPA1BP0DMV9 641 aaKnown RBP21.96■■□□□ 1.11
HDAC6-225ENST00000483506 MAP2K1Q02750 393 aaPredicted RBP21.96■■□□□ 1.11
HDAC6-225ENST00000483506 GRM1Q13255 1194 aa21.96■■□□□ 1.11
HDAC6-225ENST00000483506 LAMB1P07942 1786 aa21.95■■□□□ 1.1
HDAC6-225ENST00000483506 SMARCA5O60264 1052 aaPredicted RBP21.95■■□□□ 1.1
HDAC6-225ENST00000483506 ENTPD3O75355 529 aa21.95■■□□□ 1.1
HDAC6-225ENST00000483506 WDHD1O75717 1129 aaPredicted RBP21.95■■□□□ 1.1
HDAC6-225ENST00000483506 ATP5JP18859 108 aa21.95■■□□□ 1.1
HDAC6-225ENST00000483506 PRKG1Q13976 671 aa21.95■■□□□ 1.1
HDAC6-225ENST00000483506 NAA16Q6N069 864 aaPredicted RBP21.95■■□□□ 1.1
HDAC6-225ENST00000483506 HOOK2Q96ED9 719 aa21.95■■□□□ 1.1
HDAC6-225ENST00000483506 FZD1Q9UP38 647 aa21.95■■□□□ 1.1
HDAC6-225ENST00000483506 IREB2P48200 963 aaKnown RBP21.94■■□□□ 1.1
HDAC6-225ENST00000483506 PPP4CP60510 307 aa21.94■■□□□ 1.1
HDAC6-225ENST00000483506 TTF1Q15361 905 aaPredicted RBP21.94■■□□□ 1.1
HDAC6-225ENST00000483506 ANTXR1Q9H6X2 564 aa21.94■■□□□ 1.1
HDAC6-225ENST00000483506 NDUFB9Q9Y6M9 179 aa21.94■■□□□ 1.1
HDAC6-225ENST00000483506 COL2A1P02458 1487 aaPredicted RBP21.93■■□□□ 1.1
HDAC6-225ENST00000483506 RGS3P49796 1198 aa21.93■■□□□ 1.1
HDAC6-225ENST00000483506 ZIC5Q96T25 663 aa21.93■■□□□ 1.1
HDAC6-225ENST00000483506 ATRNL1Q5VV63 1379 aa21.92■■□□□ 1.1
HDAC6-225ENST00000483506 TCP10Q12799 353 aa21.92■■□□□ 1.1
HDAC6-225ENST00000483506 ADGRA1Q86SQ6 560 aa21.92■■□□□ 1.1
HDAC6-225ENST00000483506 EXOC6Q8TAG9 804 aa21.92■■□□□ 1.1
HDAC6-225ENST00000483506 DDX4Q9NQI0 724 aaKnown RBP21.92■■□□□ 1.1
HDAC6-225ENST00000483506 FOCADQ5VW36 1801 aa21.92■■□□□ 1.1
HDAC6-225ENST00000483506 IDH1O75874 414 aaKnown RBP21.91■■□□□ 1.1
HDAC6-225ENST00000483506 MAP3K12Q12852 859 aa21.91■■□□□ 1.1
HDAC6-225ENST00000483506 ZFPM1Q8IX07 1006 aa21.91■■□□□ 1.1
HDAC6-225ENST00000483506 REM2Q8IYK8 340 aaPredicted RBP21.91■■□□□ 1.1
HDAC6-225ENST00000483506 ANKRD13AQ8IZ07 590 aa21.91■■□□□ 1.1
HDAC6-225ENST00000483506 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.91■■□□□ 1.1
HDAC6-225ENST00000483506 GCC1Q96CN9 775 aa21.91■■□□□ 1.1
HDAC6-225ENST00000483506 HAUS7Q99871 368 aa21.91■■□□□ 1.1
HDAC6-225ENST00000483506 CDK5RAP2Q96SN8 1893 aa21.91■■□□□ 1.1
HDAC6-225ENST00000483506 BAG3O95817 575 aa21.9■■□□□ 1.1
HDAC6-225ENST00000483506 PLCG2P16885 1265 aa21.9■■□□□ 1.1
HDAC6-225ENST00000483506 KIF23Q02241 960 aaPredicted RBP21.9■■□□□ 1.1
HDAC6-225ENST00000483506 DCAF15Q66K64 600 aa21.9■■□□□ 1.1
HDAC6-225ENST00000483506 NOL10Q9BSC4 688 aaKnown RBP21.9■■□□□ 1.1
HDAC6-225ENST00000483506 ECHDC1Q9NTX5 307 aa21.9■■□□□ 1.1
HDAC6-225ENST00000483506 AK9Q5TCS8 1911 aa21.89■■□□□ 1.09
HDAC6-225ENST00000483506 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.89■■□□□ 1.09
HDAC6-225ENST00000483506 CERS3Q8IU89 383 aa21.89■■□□□ 1.09
HDAC6-225ENST00000483506 MAGEB6Q8N7X4 407 aa21.89■■□□□ 1.09
HDAC6-225ENST00000483506 AIDAQ96BJ3 306 aa21.89■■□□□ 1.09
HDAC6-225ENST00000483506 CLMNQ96JQ2 1002 aa21.89■■□□□ 1.09
HDAC6-225ENST00000483506 DNAJC2Q99543 621 aaKnown RBP21.89■■□□□ 1.09
HDAC6-225ENST00000483506 BOLA2Q9H3K6 86 aa21.89■■□□□ 1.09
HDAC6-225ENST00000483506 PAG1Q9NWQ8 432 aa21.89■■□□□ 1.09
HDAC6-225ENST00000483506 AATFQ9NY61 560 aaKnown RBP eCLIP21.89■■□□□ 1.09
HDAC6-225ENST00000483506 GOLIM4O00461 696 aa21.88■■□□□ 1.09
HDAC6-225ENST00000483506 FOXN1O15353 648 aa21.88■■□□□ 1.09
HDAC6-225ENST00000483506 ZBTB48P10074 688 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms