RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 BICC1Q9H694 974 aaKnown RBP9.3□□□□□ -0.92
CSDE1-206ENST00000483030 ZCCHC17Q9NP64 241 aaKnown RBP9.3□□□□□ -0.92
CSDE1-206ENST00000483030 MKI67P46013 3256 aaKnown RBP9.29□□□□□ -0.92
CSDE1-206ENST00000483030 PDE8BO95263 885 aa9.29□□□□□ -0.92
CSDE1-206ENST00000483030 GNRH1P01148 92 aa9.29□□□□□ -0.92
CSDE1-206ENST00000483030 INPP5BP32019 993 aa9.29□□□□□ -0.92
CSDE1-206ENST00000483030 MTFR1Q15390 333 aa9.29□□□□□ -0.92
CSDE1-206ENST00000483030 RABL6Q3YEC7 729 aaPredicted RBP9.29□□□□□ -0.92
CSDE1-206ENST00000483030 FKBP1CQ5VVH2 108 aa9.29□□□□□ -0.92
CSDE1-206ENST00000483030 DCAF15Q66K64 600 aa9.29□□□□□ -0.92
CSDE1-206ENST00000483030 C17orf99Q6UX52 265 aa9.29□□□□□ -0.92
CSDE1-206ENST00000483030 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.29□□□□□ -0.92
CSDE1-206ENST00000483030 KLHDC4Q8TBB5 520 aa9.29□□□□□ -0.92
CSDE1-206ENST00000483030 HOOK2Q96ED9 719 aa9.29□□□□□ -0.92
CSDE1-206ENST00000483030 CPA4Q9UI42 421 aa9.29□□□□□ -0.92
CSDE1-206ENST00000483030 UTYO14607 1347 aa9.29□□□□□ -0.92
CSDE1-206ENST00000483030 CTGFP29279 349 aa9.28□□□□□ -0.92
CSDE1-206ENST00000483030 PSMC4P43686 418 aa9.28□□□□□ -0.92
CSDE1-206ENST00000483030 PRMT2P55345 433 aa9.28□□□□□ -0.92
CSDE1-206ENST00000483030 PPATQ06203 517 aa9.28□□□□□ -0.92
CSDE1-206ENST00000483030 TCP10Q12799 353 aa9.28□□□□□ -0.92
CSDE1-206ENST00000483030 HHIPL2Q6UWX4 724 aa9.28□□□□□ -0.92
CSDE1-206ENST00000483030 ANKRD44Q8N8A2 993 aa9.28□□□□□ -0.92
CSDE1-206ENST00000483030 VGLL2Q8N8G2 317 aa9.28□□□□□ -0.92
CSDE1-206ENST00000483030 DPF3Q92784 378 aa9.28□□□□□ -0.92
CSDE1-206ENST00000483030 ZNF341Q9BYN7 854 aa9.28□□□□□ -0.92
CSDE1-206ENST00000483030 SRRDQ9UH36 339 aa9.28□□□□□ -0.92
CSDE1-206ENST00000483030 SUGT1Q9Y2Z0 365 aa9.28□□□□□ -0.92
CSDE1-206ENST00000483030 PDHXO00330 501 aa9.27□□□□□ -0.93
CSDE1-206ENST00000483030 FMNL1O95466 1100 aaPredicted RBP9.27□□□□□ -0.93
CSDE1-206ENST00000483030 IFIT1P09914 478 aaKnown RBP9.27□□□□□ -0.93
CSDE1-206ENST00000483030 HOXD10P28358 340 aa9.27□□□□□ -0.93
CSDE1-206ENST00000483030 ANKRD23Q86SG2 305 aa9.27□□□□□ -0.93
CSDE1-206ENST00000483030 FAM151AQ8WW52 585 aa9.27□□□□□ -0.93
CSDE1-206ENST00000483030 TRIM47Q96LD4 638 aa9.27□□□□□ -0.93
CSDE1-206ENST00000483030 MAST3O60307 1309 aa9.27□□□□□ -0.93
CSDE1-206ENST00000483030 FGFR2P21802 821 aa9.26□□□□□ -0.93
CSDE1-206ENST00000483030 OSBPP22059 807 aa9.26□□□□□ -0.93
CSDE1-206ENST00000483030 GRK4P32298 578 aa9.26□□□□□ -0.93
CSDE1-206ENST00000483030 PUM3Q15397 648 aaKnown RBP9.26□□□□□ -0.93
CSDE1-206ENST00000483030 CDC42EP5Q6NZY7 148 aa9.26□□□□□ -0.93
CSDE1-206ENST00000483030 WDR66Q8TBY9 1149 aa9.26□□□□□ -0.93
CSDE1-206ENST00000483030 RAET1EQ8TD07 263 aa9.26□□□□□ -0.93
CSDE1-206ENST00000483030 SHISA4Q96DD7 197 aa9.26□□□□□ -0.93
CSDE1-206ENST00000483030 BIN2Q9UBW5 565 aaPredicted RBP9.26□□□□□ -0.93
CSDE1-206ENST00000483030 ZNF112Q9UJU3 913 aa9.26□□□□□ -0.93
CSDE1-206ENST00000483030 KCNH4Q9UQ05 1017 aa9.26□□□□□ -0.93
CSDE1-206ENST00000483030 CENPFP49454 3210 aa9.26□□□□□ -0.93
CSDE1-206ENST00000483030 CCL5P13501 91 aa9.25□□□□□ -0.93
CSDE1-206ENST00000483030 SLC5A1P13866 664 aa9.25□□□□□ -0.93
CSDE1-206ENST00000483030 ZEB1P37275 1124 aaPredicted RBP9.25□□□□□ -0.93
CSDE1-206ENST00000483030 NFIAQ12857 509 aa9.25□□□□□ -0.93
CSDE1-206ENST00000483030 MOGSQ13724 837 aa9.25□□□□□ -0.93
CSDE1-206ENST00000483030 DIXDC1Q155Q3 683 aa9.25□□□□□ -0.93
CSDE1-206ENST00000483030 MRPL50Q8N5N7 158 aaKnown RBP9.25□□□□□ -0.93
CSDE1-206ENST00000483030 NKX2-3Q8TAU0 364 aa9.25□□□□□ -0.93
CSDE1-206ENST00000483030 LPIN2Q92539 896 aa9.25□□□□□ -0.93
CSDE1-206ENST00000483030 USP44Q9H0E7 712 aa9.25□□□□□ -0.93
CSDE1-206ENST00000483030 RNF208Q9H0X6 261 aa9.25□□□□□ -0.93
CSDE1-206ENST00000483030 USP40Q9NVE5 1235 aa9.25□□□□□ -0.93
CSDE1-206ENST00000483030 RBM27Q9P2N5 1060 aaKnown RBP9.25□□□□□ -0.93
CSDE1-206ENST00000483030 DAGLAQ9Y4D2 1042 aa9.25□□□□□ -0.93
CSDE1-206ENST00000483030 MYPNQ86TC9 1320 aa9.25□□□□□ -0.93
CSDE1-206ENST00000483030 ECM29Q5VYK3 1845 aa9.24□□□□□ -0.93
CSDE1-206ENST00000483030 EYA2O00167 538 aa9.24□□□□□ -0.93
CSDE1-206ENST00000483030 ANP32CO43423 234 aa9.24□□□□□ -0.93
CSDE1-206ENST00000483030 GJB1P08034 283 aa9.24□□□□□ -0.93
CSDE1-206ENST00000483030 CYP2C8P10632 490 aa9.24□□□□□ -0.93
CSDE1-206ENST00000483030 GJA8P48165 433 aa9.24□□□□□ -0.93
CSDE1-206ENST00000483030 RFX5P48382 616 aaPredicted RBP9.24□□□□□ -0.93
CSDE1-206ENST00000483030 PRKCZQ05513 592 aa9.24□□□□□ -0.93
CSDE1-206ENST00000483030 GPAT2Q6NUI2 795 aa9.24□□□□□ -0.93
CSDE1-206ENST00000483030 ZFPM1Q8IX07 1006 aa9.24□□□□□ -0.93
CSDE1-206ENST00000483030 FAM9BQ8IZU0 186 aa9.24□□□□□ -0.93
CSDE1-206ENST00000483030 FAM198AQ9UFP1 575 aa9.24□□□□□ -0.93
CSDE1-206ENST00000483030 OTOFQ9HC10 1997 aa9.24□□□□□ -0.93
CSDE1-206ENST00000483030 KIF16BQ96L93 1317 aa9.24□□□□□ -0.93
CSDE1-206ENST00000483030 ADGRA2Q96PE1 1338 aa9.24□□□□□ -0.93
CSDE1-206ENST00000483030 BRCA2P51587 3418 aa9.24□□□□□ -0.93
CSDE1-206ENST00000483030 RPAP1Q9BWH6 1393 aaPredicted RBP9.24□□□□□ -0.93
CSDE1-206ENST00000483030 A0A1B0GUL6 1792 aa9.23□□□□□ -0.93
CSDE1-206ENST00000483030 LAMB1P07942 1786 aa9.23□□□□□ -0.93
CSDE1-206ENST00000483030 CXCL11O14625 94 aa9.23□□□□□ -0.93
CSDE1-206ENST00000483030 LDHBP07195 334 aaKnown RBP9.23□□□□□ -0.93
CSDE1-206ENST00000483030 BCRP11274 1271 aa9.23□□□□□ -0.93
CSDE1-206ENST00000483030 PRDX5P30044 214 aa9.23□□□□□ -0.93
CSDE1-206ENST00000483030 FCGRTP55899 365 aa9.23□□□□□ -0.93
CSDE1-206ENST00000483030 UBXN2AP68543 259 aa9.23□□□□□ -0.93
CSDE1-206ENST00000483030 NOL9Q5SY16 702 aaKnown RBP9.23□□□□□ -0.93
CSDE1-206ENST00000483030 UBE2Q1Q7Z7E8 422 aa9.23□□□□□ -0.93
CSDE1-206ENST00000483030 PARK7Q99497 189 aaKnown RBP9.23□□□□□ -0.93
CSDE1-206ENST00000483030 GABRQQ9UN88 632 aa9.23□□□□□ -0.93
CSDE1-206ENST00000483030 ZHX2Q9Y6X8 837 aa9.23□□□□□ -0.93
CSDE1-206ENST00000483030 RBBP6Q7Z6E9 1792 aaKnown RBP9.22□□□□□ -0.93
CSDE1-206ENST00000483030 PHF20L1A8MW92 1017 aa9.22□□□□□ -0.93
CSDE1-206ENST00000483030 FASTKD5Q7L8L6 764 aaKnown RBP9.22□□□□□ -0.93
CSDE1-206ENST00000483030 ATG9AQ7Z3C6 839 aa9.22□□□□□ -0.93
CSDE1-206ENST00000483030 U2AF1L4Q8WU68 220 aaKnown RBP9.22□□□□□ -0.93
CSDE1-206ENST00000483030 SSH1Q8WYL5 1049 aa9.22□□□□□ -0.93
CSDE1-206ENST00000483030 HTATIP2Q9BUP3 242 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms