RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 PUM3Q15397 648 aaKnown RBP15.97■□□□□ 0.15
COL21A1-209ENST00000482933 ECM29Q5VYK3 1845 aa15.97■□□□□ 0.15
COL21A1-209ENST00000482933 MOB2Q70IA6 237 aa15.97■□□□□ 0.15
COL21A1-209ENST00000482933 TBC1D22AQ8WUA7 517 aa15.97■□□□□ 0.15
COL21A1-209ENST00000482933 PRMT6Q96LA8 375 aaPredicted RBP15.97■□□□□ 0.15
COL21A1-209ENST00000482933 DEFB129Q9H1M3 183 aa15.97■□□□□ 0.15
COL21A1-209ENST00000482933 SAGE1Q9NXZ1 904 aa15.97■□□□□ 0.15
COL21A1-209ENST00000482933 TTF2Q9UNY4 1162 aaKnown RBP15.97■□□□□ 0.15
COL21A1-209ENST00000482933 UBE2Q2LH0YL09 131 aa15.96■□□□□ 0.15
COL21A1-209ENST00000482933 PTPN12Q05209 780 aaKnown RBP15.96■□□□□ 0.15
COL21A1-209ENST00000482933 SERPINA10Q9UK55 444 aa15.96■□□□□ 0.15
COL21A1-209ENST00000482933 IPO8O15397 1037 aaKnown RBP15.95■□□□□ 0.14
COL21A1-209ENST00000482933 CSRNP1Q96S65 589 aa15.95■□□□□ 0.14
COL21A1-209ENST00000482933 VEZTQ9HBM0 779 aa15.95■□□□□ 0.14
COL21A1-209ENST00000482933 CLRN2A0PK11 232 aa15.94■□□□□ 0.14
COL21A1-209ENST00000482933 CIAO1O76071 339 aa15.94■□□□□ 0.14
COL21A1-209ENST00000482933 SLC5A1P13866 664 aa15.94■□□□□ 0.14
COL21A1-209ENST00000482933 FGFR2P21802 821 aa15.94■□□□□ 0.14
COL21A1-209ENST00000482933 CHAF1AQ13111 956 aaPredicted RBP15.94■□□□□ 0.14
COL21A1-209ENST00000482933 TNFAIP1Q13829 316 aa15.94■□□□□ 0.14
COL21A1-209ENST00000482933 SUPT20HL1Q3ZLR7 823 aa15.94■□□□□ 0.14
COL21A1-209ENST00000482933 LPIN2Q92539 896 aa15.94■□□□□ 0.14
COL21A1-209ENST00000482933 PCDHAC2Q9Y5I4 1007 aa15.94■□□□□ 0.14
COL21A1-209ENST00000482933 AKAP11Q9UKA4 1901 aa15.94■□□□□ 0.14
COL21A1-209ENST00000482933 ARAP2Q8WZ64 1704 aa15.94■□□□□ 0.14
COL21A1-209ENST00000482933 PPP1R12BO60237 982 aaPredicted RBP15.94■□□□□ 0.14
COL21A1-209ENST00000482933 BCAMP50895 628 aa15.94■□□□□ 0.14
COL21A1-209ENST00000482933 PRKG1Q13976 671 aa15.94■□□□□ 0.14
COL21A1-209ENST00000482933 INTS3Q68E01 1043 aaKnown RBP15.94■□□□□ 0.14
COL21A1-209ENST00000482933 PLPP6Q8IY26 295 aa15.94■□□□□ 0.14
COL21A1-209ENST00000482933 PTCD2Q8WV60 388 aaKnown RBP15.94■□□□□ 0.14
COL21A1-209ENST00000482933 RNF186Q9NXI6 227 aa15.94■□□□□ 0.14
COL21A1-209ENST00000482933 ANGEL1Q9UNK9 670 aaKnown RBP15.94■□□□□ 0.14
COL21A1-209ENST00000482933 IQSEC3Q9UPP2 1182 aaPredicted RBP15.94■□□□□ 0.14
COL21A1-209ENST00000482933 LRRFIP2Q9Y608 721 aaKnown RBP15.94■□□□□ 0.14
COL21A1-209ENST00000482933 TRPA1O75762 1119 aa15.93■□□□□ 0.14
COL21A1-209ENST00000482933 GNAI3P08754 354 aa15.93■□□□□ 0.14
COL21A1-209ENST00000482933 HDLBPQ00341 1268 aaKnown RBP15.93■□□□□ 0.14
COL21A1-209ENST00000482933 ATG9AQ7Z3C6 839 aa15.93■□□□□ 0.14
COL21A1-209ENST00000482933 MEIS3Q99687 375 aa15.93■□□□□ 0.14
COL21A1-209ENST00000482933 CEP126Q9P2H0 1117 aa15.93■□□□□ 0.14
COL21A1-209ENST00000482933 SUGT1Q9Y2Z0 365 aa15.93■□□□□ 0.14
COL21A1-209ENST00000482933 IL15P40933 162 aaPredicted RBP15.92■□□□□ 0.14
COL21A1-209ENST00000482933 CRKP46108 304 aa15.92■□□□□ 0.14
COL21A1-209ENST00000482933 HNRNPUQ00839 825 aaKnown RBP eCLIP15.92■□□□□ 0.14
COL21A1-209ENST00000482933 MAP3K11Q16584 847 aa15.92■□□□□ 0.14
COL21A1-209ENST00000482933 DZIP1LQ8IYY4 767 aaKnown RBP15.92■□□□□ 0.14
COL21A1-209ENST00000482933 SIL1Q9H173 461 aa15.92■□□□□ 0.14
COL21A1-209ENST00000482933 ZNF70Q9UC06 446 aaPredicted RBP15.92■□□□□ 0.14
COL21A1-209ENST00000482933 MAST3O60307 1309 aa15.91■□□□□ 0.14
COL21A1-209ENST00000482933 UNCXA6NJT0 531 aa15.91■□□□□ 0.14
COL21A1-209ENST00000482933 TNNI2P48788 182 aa15.91■□□□□ 0.14
COL21A1-209ENST00000482933 RASA3Q14644 834 aa15.91■□□□□ 0.14
COL21A1-209ENST00000482933 LDLRAD1Q5T700 205 aa15.91■□□□□ 0.14
COL21A1-209ENST00000482933 ATF7IPQ6VMQ6 1270 aa15.91■□□□□ 0.14
COL21A1-209ENST00000482933 ABHD8Q96I13 439 aa15.91■□□□□ 0.14
COL21A1-209ENST00000482933 MRIQ9BWK5 157 aa15.91■□□□□ 0.14
COL21A1-209ENST00000482933 TDRD3Q9H7E2 651 aaKnown RBP15.91■□□□□ 0.14
COL21A1-209ENST00000482933 COPRSQ9NQ92 184 aa15.91■□□□□ 0.14
COL21A1-209ENST00000482933 CASP8AP2Q9UKL3 1982 aa15.91■□□□□ 0.14
COL21A1-209ENST00000482933 TRIM27P14373 513 aa15.9■□□□□ 0.14
COL21A1-209ENST00000482933 PBX2P40425 430 aa15.9■□□□□ 0.14
COL21A1-209ENST00000482933 DSG2Q14126 1118 aa15.9■□□□□ 0.14
COL21A1-209ENST00000482933 WDR66Q8TBY9 1149 aa15.9■□□□□ 0.14
COL21A1-209ENST00000482933 FRAT1Q92837 279 aaPredicted RBP15.9■□□□□ 0.14
COL21A1-209ENST00000482933 TEKT1Q969V4 418 aa15.9■□□□□ 0.14
COL21A1-209ENST00000482933 GNL3LQ9NVN8 582 aaKnown RBP15.9■□□□□ 0.14
COL21A1-209ENST00000482933 AOX1Q06278 1338 aa15.89■□□□□ 0.13
COL21A1-209ENST00000482933 BCAR3O75815 825 aa15.89■□□□□ 0.13
COL21A1-209ENST00000482933 IREB2P48200 963 aaKnown RBP15.89■□□□□ 0.13
COL21A1-209ENST00000482933 TM4SF4P48230 202 aa15.89■□□□□ 0.13
COL21A1-209ENST00000482933 SREBF2Q12772 1141 aa15.89■□□□□ 0.13
COL21A1-209ENST00000482933 ATP2B3Q16720 1220 aa15.89■□□□□ 0.13
COL21A1-209ENST00000482933 NBPF12Q5TAG4 269 aaPredicted RBP15.89■□□□□ 0.13
COL21A1-209ENST00000482933 SLC10A4Q96EP9 437 aa15.89■□□□□ 0.13
COL21A1-209ENST00000482933 LHX6Q9UPM6 363 aa15.89■□□□□ 0.13
COL21A1-209ENST00000482933 GRIK5Q16478 980 aa15.88■□□□□ 0.13
COL21A1-209ENST00000482933 FZD1Q9UP38 647 aa15.88■□□□□ 0.13
COL21A1-209ENST00000482933 PA2G4Q9UQ80 394 aaKnown RBP15.88■□□□□ 0.13
COL21A1-209ENST00000482933 MYH13Q9UKX3 1938 aa15.88■□□□□ 0.13
COL21A1-209ENST00000482933 SRGAP3O43295 1099 aa15.87■□□□□ 0.13
COL21A1-209ENST00000482933 GTPBP6O43824 516 aaPredicted RBP15.87■□□□□ 0.13
COL21A1-209ENST00000482933 TBC1D12O60347 775 aa15.87■□□□□ 0.13
COL21A1-209ENST00000482933 MTX1Q13505 466 aa15.87■□□□□ 0.13
COL21A1-209ENST00000482933 DGKZQ13574 1117 aa15.87■□□□□ 0.13
COL21A1-209ENST00000482933 SPRYD7Q5W111 196 aa15.87■□□□□ 0.13
COL21A1-209ENST00000482933 ZKSCAN2Q63HK3 967 aa15.87■□□□□ 0.13
COL21A1-209ENST00000482933 ZDHHC15Q96MV8 337 aa15.87■□□□□ 0.13
COL21A1-209ENST00000482933 MCOLN1Q9GZU1 580 aa15.87■□□□□ 0.13
COL21A1-209ENST00000482933 CRISPLD2Q9H0B8 497 aa15.87■□□□□ 0.13
COL21A1-209ENST00000482933 TMOD2Q9NZR1 351 aa15.87■□□□□ 0.13
COL21A1-209ENST00000482933 SSC5DA1L4H1 1573 aa15.87■□□□□ 0.13
COL21A1-209ENST00000482933 TCP10L2B9ZVM9 353 aa15.86■□□□□ 0.13
COL21A1-209ENST00000482933 USP2O75604 605 aaPredicted RBP15.86■□□□□ 0.13
COL21A1-209ENST00000482933 GNAI2P04899 355 aa15.86■□□□□ 0.13
COL21A1-209ENST00000482933 ZBTB48P10074 688 aaPredicted RBP15.86■□□□□ 0.13
COL21A1-209ENST00000482933 INHBEP58166 350 aa15.86■□□□□ 0.13
COL21A1-209ENST00000482933 HHIPL2Q6UWX4 724 aa15.86■□□□□ 0.13
COL21A1-209ENST00000482933 ANKRD13AQ8IZ07 590 aa15.86■□□□□ 0.13
COL21A1-209ENST00000482933 DENND2AQ9ULE3 1009 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms