RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 MYH2Q9UKX2 1941 aa12.32□□□□□ -0.44
HLA-DQA1-206ENST00000482745 APOBEC3HQ6NTF7 200 aaKnown RBP12.32□□□□□ -0.44
HLA-DQA1-206ENST00000482745 HHIPL2Q6UWX4 724 aa12.32□□□□□ -0.44
HLA-DQA1-206ENST00000482745 PKNOX2Q96KN3 472 aa12.32□□□□□ -0.44
HLA-DQA1-206ENST00000482745 MRIQ9BWK5 157 aa12.32□□□□□ -0.44
HLA-DQA1-206ENST00000482745 ABCF2Q9UG63 623 aa12.32□□□□□ -0.44
HLA-DQA1-206ENST00000482745 SALL1Q9NSC2 1324 aa12.32□□□□□ -0.44
HLA-DQA1-206ENST00000482745 CEP85Q6P2H3 762 aa12.31□□□□□ -0.44
HLA-DQA1-206ENST00000482745 ZGPATQ8N5A5 531 aaKnown RBP12.31□□□□□ -0.44
HLA-DQA1-206ENST00000482745 CSRNP1Q96S65 589 aa12.31□□□□□ -0.44
HLA-DQA1-206ENST00000482745 COG6Q9Y2V7 657 aa12.31□□□□□ -0.44
HLA-DQA1-206ENST00000482745 DAGLAQ9Y4D2 1042 aa12.31□□□□□ -0.44
HLA-DQA1-206ENST00000482745 IREB2P48200 963 aaKnown RBP12.31□□□□□ -0.44
HLA-DQA1-206ENST00000482745 LDLRAD1Q5T700 205 aa12.31□□□□□ -0.44
HLA-DQA1-206ENST00000482745 CLMNQ96JQ2 1002 aa12.31□□□□□ -0.44
HLA-DQA1-206ENST00000482745 TEPSINQ96N21 525 aa12.31□□□□□ -0.44
HLA-DQA1-206ENST00000482745 CASP8AP2Q9UKL3 1982 aa12.3□□□□□ -0.44
HLA-DQA1-206ENST00000482745 TRPA1O75762 1119 aa12.3□□□□□ -0.44
HLA-DQA1-206ENST00000482745 MAP3K11Q16584 847 aa12.3□□□□□ -0.44
HLA-DQA1-206ENST00000482745 PI16Q6UXB8 463 aa12.3□□□□□ -0.44
HLA-DQA1-206ENST00000482745 DZIP1Q86YF9 867 aaKnown RBP12.3□□□□□ -0.44
HLA-DQA1-206ENST00000482745 PDS5AQ29RF7 1337 aaKnown RBP12.3□□□□□ -0.44
HLA-DQA1-206ENST00000482745 AK9Q5TCS8 1911 aa12.3□□□□□ -0.44
HLA-DQA1-206ENST00000482745 CAPN15O75808 1086 aa12.29□□□□□ -0.44
HLA-DQA1-206ENST00000482745 TNNI3KQ59H18 835 aa12.29□□□□□ -0.44
HLA-DQA1-206ENST00000482745 SLC10A4Q96EP9 437 aa12.29□□□□□ -0.44
HLA-DQA1-206ENST00000482745 RNF186Q9NXI6 227 aa12.29□□□□□ -0.44
HLA-DQA1-206ENST00000482745 DDX19BQ9UMR2 479 aa12.29□□□□□ -0.44
HLA-DQA1-206ENST00000482745 FPGT-TNNI3KV9GXZ4 949 aa12.29□□□□□ -0.44
HLA-DQA1-206ENST00000482745 USP2O75604 605 aaPredicted RBP12.29□□□□□ -0.44
HLA-DQA1-206ENST00000482745 SPTY2D1Q68D10 685 aaPredicted RBP12.29□□□□□ -0.44
HLA-DQA1-206ENST00000482745 REM2Q8IYK8 340 aaPredicted RBP12.29□□□□□ -0.44
HLA-DQA1-206ENST00000482745 SPATA5Q8NB90 893 aa12.29□□□□□ -0.44
HLA-DQA1-206ENST00000482745 SAGE1Q9NXZ1 904 aa12.29□□□□□ -0.44
HLA-DQA1-206ENST00000482745 HMG20BQ9P0W2 317 aa12.29□□□□□ -0.44
HLA-DQA1-206ENST00000482745 ZBTB22O15209 634 aa12.28□□□□□ -0.44
HLA-DQA1-206ENST00000482745 ARID4AP29374 1257 aaPredicted RBP12.28□□□□□ -0.44
HLA-DQA1-206ENST00000482745 TTC39AQ5SRH9 613 aa12.28□□□□□ -0.44
HLA-DQA1-206ENST00000482745 SPRYD7Q5W111 196 aa12.28□□□□□ -0.44
HLA-DQA1-206ENST00000482745 CDC42EP5Q6NZY7 148 aa12.28□□□□□ -0.44
HLA-DQA1-206ENST00000482745 FAM83AQ86UY5 434 aa12.28□□□□□ -0.44
HLA-DQA1-206ENST00000482745 ANKRD13AQ8IZ07 590 aa12.28□□□□□ -0.44
HLA-DQA1-206ENST00000482745 DBNDD2Q9BQY9 259 aa12.28□□□□□ -0.44
HLA-DQA1-206ENST00000482745 GPR108Q9NPR9 543 aa12.28□□□□□ -0.44
HLA-DQA1-206ENST00000482745 EXOC6BQ9Y2D4 811 aa12.28□□□□□ -0.44
HLA-DQA1-206ENST00000482745 MCAMP43121 646 aa12.28□□□□□ -0.44
HLA-DQA1-206ENST00000482745 TCP10Q12799 353 aa12.28□□□□□ -0.44
HLA-DQA1-206ENST00000482745 FKBP1CQ5VVH2 108 aa12.28□□□□□ -0.44
HLA-DQA1-206ENST00000482745 WNK4Q96J92 1243 aa12.28□□□□□ -0.44
HLA-DQA1-206ENST00000482745 USP40Q9NVE5 1235 aa12.28□□□□□ -0.44
HLA-DQA1-206ENST00000482745 UQCRFS1P1P0C7P4 283 aa12.27□□□□□ -0.45
HLA-DQA1-206ENST00000482745 SREBF2Q12772 1141 aa12.27□□□□□ -0.45
HLA-DQA1-206ENST00000482745 NFIAQ12857 509 aa12.27□□□□□ -0.45
HLA-DQA1-206ENST00000482745 CCDC158Q5M9N0 1113 aa12.27□□□□□ -0.45
HLA-DQA1-206ENST00000482745 TBC1D9Q6ZT07 1266 aa12.27□□□□□ -0.45
HLA-DQA1-206ENST00000482745 SLF2Q8IX21 1173 aa12.27□□□□□ -0.45
HLA-DQA1-206ENST00000482745 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.27□□□□□ -0.45
HLA-DQA1-206ENST00000482745 ELP3Q9H9T3 547 aa12.27□□□□□ -0.45
HLA-DQA1-206ENST00000482745 RPAP1Q9BWH6 1393 aaPredicted RBP12.27□□□□□ -0.45
HLA-DQA1-206ENST00000482745 MECOMQ03112 1051 aa12.26□□□□□ -0.45
HLA-DQA1-206ENST00000482745 C20orf194Q5TEA3 1177 aa12.26□□□□□ -0.45
HLA-DQA1-206ENST00000482745 CENPQQ7L2Z9 268 aaPredicted RBP12.26□□□□□ -0.45
HLA-DQA1-206ENST00000482745 SNRKQ9NRH2 765 aa12.26□□□□□ -0.45
HLA-DQA1-206ENST00000482745 GAKO14976 1311 aa12.26□□□□□ -0.45
HLA-DQA1-206ENST00000482745 LAMB1P07942 1786 aa12.26□□□□□ -0.45
HLA-DQA1-206ENST00000482745 MAST2Q6P0Q8 1798 aa12.26□□□□□ -0.45
HLA-DQA1-206ENST00000482745 UNCXA6NJT0 531 aa12.26□□□□□ -0.45
HLA-DQA1-206ENST00000482745 ZBTB48P10074 688 aaPredicted RBP12.26□□□□□ -0.45
HLA-DQA1-206ENST00000482745 ERC1Q8IUD2 1116 aa12.26□□□□□ -0.45
HLA-DQA1-206ENST00000482745 FAM151AQ8WW52 585 aa12.26□□□□□ -0.45
HLA-DQA1-206ENST00000482745 HOOK2Q96ED9 719 aa12.26□□□□□ -0.45
HLA-DQA1-206ENST00000482745 CCDC8Q9H0W5 538 aaPredicted RBP12.26□□□□□ -0.45
HLA-DQA1-206ENST00000482745 ZBTB40Q9NUA8 1239 aa12.26□□□□□ -0.45
HLA-DQA1-206ENST00000482745 TLR7Q9NYK1 1049 aaKnown RBP12.26□□□□□ -0.45
HLA-DQA1-206ENST00000482745 RAI14Q9P0K7 980 aa12.26□□□□□ -0.45
HLA-DQA1-206ENST00000482745 MROH7-TTC4A0A0A0MT08 1334 aa12.26□□□□□ -0.45
HLA-DQA1-206ENST00000482745 DOCK2Q92608 1830 aa12.26□□□□□ -0.45
HLA-DQA1-206ENST00000482745 APBB1O00213 710 aa12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 BTDP43251 543 aa12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 TM4SF4P48230 202 aa12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 VGLL4Q14135 290 aa12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 EAF2Q96CJ1 260 aaPredicted RBP12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 WRNIP1Q96S55 665 aa12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 CHMP4BQ9H444 224 aaKnown RBP12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 LRP2BPQ9P2M1 347 aa12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 FAM198AQ9UFP1 575 aa12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 DBNLQ9UJU6 430 aaKnown RBP12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 CSADQ9Y600 493 aa12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 MYO5AQ9Y4I1 1855 aaKnown RBP12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 MANSC4A6NHS7 340 aaPredicted RBP12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 HMMRO75330 724 aa12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 GJA5P36382 358 aa12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 L1TD1Q5T7N2 865 aaKnown RBP12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 DCAF15Q66K64 600 aa12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 MIGA2Q7L4E1 593 aa12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 RPAP2Q8IXW5 612 aaPredicted RBP12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 OPTNQ96CV9 577 aa12.25□□□□□ -0.45
HLA-DQA1-206ENST00000482745 TBC1D8O95759 1140 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms