RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 FAM83AQ86UY5 434 aa19.3■□□□□ 0.68
COL16A1-212ENST00000482478 SLF2Q8IX21 1173 aa19.3■□□□□ 0.68
COL16A1-212ENST00000482478 SPATA5Q8NB90 893 aa19.3■□□□□ 0.68
COL16A1-212ENST00000482478 DOCK2Q92608 1830 aa19.3■□□□□ 0.68
COL16A1-212ENST00000482478 MANSC4A6NHS7 340 aaPredicted RBP19.29■□□□□ 0.68
COL16A1-212ENST00000482478 UNCXA6NJT0 531 aa19.29■□□□□ 0.68
COL16A1-212ENST00000482478 USP2O75604 605 aaPredicted RBP19.29■□□□□ 0.68
COL16A1-212ENST00000482478 ARID4AP29374 1257 aaPredicted RBP19.29■□□□□ 0.68
COL16A1-212ENST00000482478 TCP10Q12799 353 aa19.29■□□□□ 0.68
COL16A1-212ENST00000482478 VGLL4Q14135 290 aa19.29■□□□□ 0.68
COL16A1-212ENST00000482478 FKBP1CQ5VVH2 108 aa19.29■□□□□ 0.68
COL16A1-212ENST00000482478 DCAF15Q66K64 600 aa19.29■□□□□ 0.68
COL16A1-212ENST00000482478 CDC42EP5Q6NZY7 148 aa19.29■□□□□ 0.68
COL16A1-212ENST00000482478 ERICH6Q7L0X2 663 aa19.29■□□□□ 0.68
COL16A1-212ENST00000482478 WRNIP1Q96S55 665 aa19.29■□□□□ 0.68
COL16A1-212ENST00000482478 DDX19BQ9UMR2 479 aa19.29■□□□□ 0.68
COL16A1-212ENST00000482478 CASP8AP2Q9UKL3 1982 aa19.29■□□□□ 0.68
COL16A1-212ENST00000482478 MYH2Q9UKX2 1941 aa19.29■□□□□ 0.68
COL16A1-212ENST00000482478 LAMB1P07942 1786 aa19.29■□□□□ 0.68
COL16A1-212ENST00000482478 MROH7-TTC4A0A0A0MT08 1334 aa19.28■□□□□ 0.68
COL16A1-212ENST00000482478 GAKO14976 1311 aa19.28■□□□□ 0.68
COL16A1-212ENST00000482478 UQCRFS1P1P0C7P4 283 aa19.28■□□□□ 0.68
COL16A1-212ENST00000482478 NFIAQ12857 509 aa19.28■□□□□ 0.68
COL16A1-212ENST00000482478 DGKZQ13574 1117 aa19.28■□□□□ 0.68
COL16A1-212ENST00000482478 OPTNQ96CV9 577 aa19.28■□□□□ 0.68
COL16A1-212ENST00000482478 ABHD8Q96I13 439 aa19.28■□□□□ 0.68
COL16A1-212ENST00000482478 USP40Q9NVE5 1235 aa19.28■□□□□ 0.68
COL16A1-212ENST00000482478 RAI14Q9P0K7 980 aa19.28■□□□□ 0.68
COL16A1-212ENST00000482478 HMG20BQ9P0W2 317 aa19.28■□□□□ 0.68
COL16A1-212ENST00000482478 COG6Q9Y2V7 657 aa19.28■□□□□ 0.68
COL16A1-212ENST00000482478 ZBTB22O15209 634 aa19.27■□□□□ 0.68
COL16A1-212ENST00000482478 MCAMP43121 646 aa19.27■□□□□ 0.68
COL16A1-212ENST00000482478 BTDP43251 543 aa19.27■□□□□ 0.68
COL16A1-212ENST00000482478 CCDC158Q5M9N0 1113 aa19.27■□□□□ 0.68
COL16A1-212ENST00000482478 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.27■□□□□ 0.68
COL16A1-212ENST00000482478 DBNDD2Q9BQY9 259 aa19.27■□□□□ 0.68
COL16A1-212ENST00000482478 EXOC6BQ9Y2D4 811 aa19.27■□□□□ 0.68
COL16A1-212ENST00000482478 TBC1D8O95759 1140 aa19.26■□□□□ 0.67
COL16A1-212ENST00000482478 MECOMQ03112 1051 aa19.26■□□□□ 0.67
COL16A1-212ENST00000482478 OTUD5Q96G74 571 aa19.26■□□□□ 0.67
COL16A1-212ENST00000482478 MCOLN1Q9GZU1 580 aa19.26■□□□□ 0.67
COL16A1-212ENST00000482478 GPR108Q9NPR9 543 aa19.26■□□□□ 0.67
COL16A1-212ENST00000482478 RFX7Q2KHR2 1363 aa19.26■□□□□ 0.67
COL16A1-212ENST00000482478 ALDH1A1P00352 501 aa19.25■□□□□ 0.67
COL16A1-212ENST00000482478 TM4SF4P48230 202 aa19.25■□□□□ 0.67
COL16A1-212ENST00000482478 GSTO1P78417 241 aa19.25■□□□□ 0.67
COL16A1-212ENST00000482478 MAP3K9P80192 1104 aa19.25■□□□□ 0.67
COL16A1-212ENST00000482478 PICALMQ13492 652 aa19.25■□□□□ 0.67
COL16A1-212ENST00000482478 ERC1Q8IUD2 1116 aa19.25■□□□□ 0.67
COL16A1-212ENST00000482478 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.25■□□□□ 0.67
COL16A1-212ENST00000482478 FAM151AQ8WW52 585 aa19.25■□□□□ 0.67
COL16A1-212ENST00000482478 ZNF341Q9BYN7 854 aa19.25■□□□□ 0.67
COL16A1-212ENST00000482478 TLR7Q9NYK1 1049 aaKnown RBP19.25■□□□□ 0.67
COL16A1-212ENST00000482478 LRP2BPQ9P2M1 347 aa19.25■□□□□ 0.67
COL16A1-212ENST00000482478 HMMRO75330 724 aa19.24■□□□□ 0.67
COL16A1-212ENST00000482478 GJA5P36382 358 aa19.24■□□□□ 0.67
COL16A1-212ENST00000482478 RGS3P49796 1198 aa19.24■□□□□ 0.67
COL16A1-212ENST00000482478 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.24■□□□□ 0.67
COL16A1-212ENST00000482478 TBC1D9Q6ZT07 1266 aa19.24■□□□□ 0.67
COL16A1-212ENST00000482478 MIGA2Q7L4E1 593 aa19.24■□□□□ 0.67
COL16A1-212ENST00000482478 IFNL1Q8IU54 200 aa19.24■□□□□ 0.67
COL16A1-212ENST00000482478 ZSCAN29Q8IWY8 852 aaPredicted RBP19.24■□□□□ 0.67
COL16A1-212ENST00000482478 CNKSR2Q8WXI2 1034 aa19.24■□□□□ 0.67
COL16A1-212ENST00000482478 SNRKQ9NRH2 765 aa19.24■□□□□ 0.67
COL16A1-212ENST00000482478 NOP58Q9Y2X3 529 aaKnown RBP19.24■□□□□ 0.67
COL16A1-212ENST00000482478 NOL10Q9BSC4 688 aaKnown RBP19.23■□□□□ 0.67
COL16A1-212ENST00000482478 CHMP4BQ9H444 224 aaKnown RBP19.23■□□□□ 0.67
COL16A1-212ENST00000482478 FAM198AQ9UFP1 575 aa19.23■□□□□ 0.67
COL16A1-212ENST00000482478 DBNLQ9UJU6 430 aaKnown RBP19.23■□□□□ 0.67
COL16A1-212ENST00000482478 SNCAIPQ9Y6H5 919 aa19.23■□□□□ 0.67
COL16A1-212ENST00000482478 AK9Q5TCS8 1911 aa19.23■□□□□ 0.67
COL16A1-212ENST00000482478 APBB1O00213 710 aa19.22■□□□□ 0.67
COL16A1-212ENST00000482478 IGF2BP3O00425 579 aaKnown RBP eCLIP19.22■□□□□ 0.67
COL16A1-212ENST00000482478 HSP90AB4PQ58FF6 505 aa19.22■□□□□ 0.67
COL16A1-212ENST00000482478 OTUD7BQ6GQQ9 843 aa19.22■□□□□ 0.67
COL16A1-212ENST00000482478 AACSQ86V21 672 aa19.22■□□□□ 0.67
COL16A1-212ENST00000482478 ZNF296Q8WUU4 475 aaPredicted RBP19.22■□□□□ 0.67
COL16A1-212ENST00000482478 CCDC8Q9H0W5 538 aaPredicted RBP19.22■□□□□ 0.67
COL16A1-212ENST00000482478 BCL11AQ9H165 835 aa19.22■□□□□ 0.67
COL16A1-212ENST00000482478 CCL15-CCL14A0A0B4J2E2 113 aa19.21■□□□□ 0.67
COL16A1-212ENST00000482478 SPDYE5A6NIY4 337 aa19.21■□□□□ 0.67
COL16A1-212ENST00000482478 CCDC85CA6NKD9 419 aa19.21■□□□□ 0.67
COL16A1-212ENST00000482478 INHBEP58166 350 aa19.21■□□□□ 0.67
COL16A1-212ENST00000482478 CCL15Q16663 113 aa19.21■□□□□ 0.67
COL16A1-212ENST00000482478 CTU1Q7Z7A3 348 aaKnown RBP19.21■□□□□ 0.67
COL16A1-212ENST00000482478 ZKSCAN4Q969J2 545 aaPredicted RBP19.21■□□□□ 0.67
COL16A1-212ENST00000482478 NSUN4Q96CB9 384 aaKnown RBP19.21■□□□□ 0.67
COL16A1-212ENST00000482478 GPR25O00155 361 aa19.2■□□□□ 0.66
COL16A1-212ENST00000482478 ENTPD3O75355 529 aa19.2■□□□□ 0.66
COL16A1-212ENST00000482478 LDHCP07864 332 aa19.2■□□□□ 0.66
COL16A1-212ENST00000482478 GTF2A2P52657 109 aa19.2■□□□□ 0.66
COL16A1-212ENST00000482478 IDI2Q9BXS1 227 aa19.2■□□□□ 0.66
COL16A1-212ENST00000482478 WDHD1O75717 1129 aaPredicted RBP19.19■□□□□ 0.66
COL16A1-212ENST00000482478 INPP5BP32019 993 aa19.19■□□□□ 0.66
COL16A1-212ENST00000482478 NAA16Q6N069 864 aaPredicted RBP19.19■□□□□ 0.66
COL16A1-212ENST00000482478 ERO1BQ86YB8 467 aa19.19■□□□□ 0.66
COL16A1-212ENST00000482478 EAF2Q96CJ1 260 aaPredicted RBP19.19■□□□□ 0.66
COL16A1-212ENST00000482478 YTHDC1Q96MU7 727 aaKnown RBP19.19■□□□□ 0.66
COL16A1-212ENST00000482478 IL1RAPL2Q9NP60 686 aa19.19■□□□□ 0.66
COL16A1-212ENST00000482478 ATRNL1Q5VV63 1379 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms