RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 GPIHBP1Q8IV16 184 aa14.57□□□□□ -0.08
VPS52-218ENST00000482399 TRIM22Q8IYM9 498 aa14.57□□□□□ -0.08
VPS52-218ENST00000482399 PCMTD1Q96MG8 357 aaPredicted RBP14.57□□□□□ -0.08
VPS52-218ENST00000482399 WDR24Q96S15 920 aa14.57□□□□□ -0.08
VPS52-218ENST00000482399 NAPBQ9H115 298 aa14.57□□□□□ -0.08
VPS52-218ENST00000482399 MAPK8IP1Q9UQF2 711 aa14.57□□□□□ -0.08
VPS52-218ENST00000482399 CEMIPQ8WUJ3 1361 aa14.57□□□□□ -0.08
VPS52-218ENST00000482399 PTPRUQ92729 1446 aa14.57□□□□□ -0.08
VPS52-218ENST00000482399 BTBD18B2RXH4 712 aa14.57□□□□□ -0.08
VPS52-218ENST00000482399 ANKRD65E5RJM6 399 aa14.57□□□□□ -0.08
VPS52-218ENST00000482399 CASP1P29466 404 aa14.57□□□□□ -0.08
VPS52-218ENST00000482399 SCARF1Q14162 830 aa14.57□□□□□ -0.08
VPS52-218ENST00000482399 ATL3Q6DD88 541 aa14.57□□□□□ -0.08
VPS52-218ENST00000482399 LEKR1Q6ZMV7 388 aa14.57□□□□□ -0.08
VPS52-218ENST00000482399 TOM1L2Q6ZVM7 507 aa14.57□□□□□ -0.08
VPS52-218ENST00000482399 OSBPL5Q9H0X9 879 aaPredicted RBP14.57□□□□□ -0.08
VPS52-218ENST00000482399 PSDA5PKW4 1024 aaPredicted RBP14.56□□□□□ -0.08
VPS52-218ENST00000482399 CMA1P23946 247 aa14.56□□□□□ -0.08
VPS52-218ENST00000482399 SLC4A8Q2Y0W8 1093 aa14.56□□□□□ -0.08
VPS52-218ENST00000482399 RAI14Q9P0K7 980 aa14.56□□□□□ -0.08
VPS52-218ENST00000482399 KIF5CO60282 957 aa14.56□□□□□ -0.08
VPS52-218ENST00000482399 SSRP1Q08945 709 aaKnown RBP14.56□□□□□ -0.08
VPS52-218ENST00000482399 MTF1Q14872 753 aa14.56□□□□□ -0.08
VPS52-218ENST00000482399 TOGARAM2Q6ZUX3 1019 aa14.56□□□□□ -0.08
VPS52-218ENST00000482399 SMYD4Q8IYR2 804 aaPredicted RBP14.56□□□□□ -0.08
VPS52-218ENST00000482399 A0A1W2PQ27 194 aa14.56□□□□□ -0.08
VPS52-218ENST00000482399 A0A1W2PQ64 194 aa14.56□□□□□ -0.08
VPS52-218ENST00000482399 A0A1W2PQD8 194 aa14.56□□□□□ -0.08
VPS52-218ENST00000482399 EXOSC10Q01780 885 aaKnown RBP14.56□□□□□ -0.08
VPS52-218ENST00000482399 CTDSPL2Q05D32 466 aa14.56□□□□□ -0.08
VPS52-218ENST00000482399 EEF2KMTQ96G04 330 aa14.56□□□□□ -0.08
VPS52-218ENST00000482399 RABEP2Q9H5N1 569 aa14.56□□□□□ -0.08
VPS52-218ENST00000482399 SERTAD1Q9UHV2 236 aa14.56□□□□□ -0.08
VPS52-218ENST00000482399 TULP1O00294 542 aaPredicted RBP14.55□□□□□ -0.08
VPS52-218ENST00000482399 IRX5P78411 483 aaPredicted RBP14.55□□□□□ -0.08
VPS52-218ENST00000482399 ARHGEF25Q86VW2 580 aa14.55□□□□□ -0.08
VPS52-218ENST00000482399 ANKLE2Q86XL3 938 aa14.55□□□□□ -0.08
VPS52-218ENST00000482399 SYNE4Q8N205 404 aa14.55□□□□□ -0.08
VPS52-218ENST00000482399 SENP2Q9HC62 589 aa14.55□□□□□ -0.08
VPS52-218ENST00000482399 SAMSN1Q9NSI8 373 aaKnown RBP14.55□□□□□ -0.08
VPS52-218ENST00000482399 ANGEL1Q9UNK9 670 aaKnown RBP14.55□□□□□ -0.08
VPS52-218ENST00000482399 MROH7-TTC4A0A0A0MT08 1334 aa14.55□□□□□ -0.08
VPS52-218ENST00000482399 ABCF2Q9UG63 623 aa14.55□□□□□ -0.08
VPS52-218ENST00000482399 ARHGAP6O43182 974 aa14.54□□□□□ -0.08
VPS52-218ENST00000482399 CAPN2P17655 700 aa14.54□□□□□ -0.08
VPS52-218ENST00000482399 FILIP1LQ4L180 1135 aa14.54□□□□□ -0.08
VPS52-218ENST00000482399 PLBD2Q8NHP8 589 aa14.54□□□□□ -0.08
VPS52-218ENST00000482399 POLR3EQ9NVU0 708 aa14.54□□□□□ -0.08
VPS52-218ENST00000482399 PLEKHG1Q9ULL1 1385 aa14.54□□□□□ -0.08
VPS52-218ENST00000482399 PEAK1Q9H792 1746 aa14.54□□□□□ -0.08
VPS52-218ENST00000482399 SNAP23O00161 211 aa14.54□□□□□ -0.08
VPS52-218ENST00000482399 SLC39A14Q15043 492 aa14.54□□□□□ -0.08
VPS52-218ENST00000482399 DIS3L2Q8IYB7 885 aaKnown RBP14.54□□□□□ -0.08
VPS52-218ENST00000482399 MIGA1Q8NAN2 632 aa14.54□□□□□ -0.08
VPS52-218ENST00000482399 GOLGA1Q92805 767 aa14.54□□□□□ -0.08
VPS52-218ENST00000482399 CABP5Q9NP86 173 aa14.54□□□□□ -0.08
VPS52-218ENST00000482399 PXDNLA1KZ92 1463 aa14.54□□□□□ -0.08
VPS52-218ENST00000482399 SOWAHDA6NJG2 315 aa14.54□□□□□ -0.08
VPS52-218ENST00000482399 RFX5P48382 616 aaPredicted RBP14.54□□□□□ -0.08
VPS52-218ENST00000482399 NUP88Q99567 741 aaPredicted RBP14.54□□□□□ -0.08
VPS52-218ENST00000482399 PARD6BQ9BYG5 372 aa14.54□□□□□ -0.08
VPS52-218ENST00000482399 PHKG2P15735 406 aa14.53□□□□□ -0.08
VPS52-218ENST00000482399 FKBP15Q5T1M5 1219 aa14.53□□□□□ -0.08
VPS52-218ENST00000482399 SHC4Q6S5L8 630 aa14.53□□□□□ -0.08
VPS52-218ENST00000482399 KRI1Q8N9T8 703 aaKnown RBP14.53□□□□□ -0.08
VPS52-218ENST00000482399 AKAP2Q9Y2D5 859 aa14.53□□□□□ -0.08
VPS52-218ENST00000482399 FHOD1Q9Y613 1164 aa14.53□□□□□ -0.08
VPS52-218ENST00000482399 PLA2G4AP47712 749 aa14.53□□□□□ -0.08
VPS52-218ENST00000482399 NR5A1Q13285 461 aa14.53□□□□□ -0.08
VPS52-218ENST00000482399 CAGE1Q8TC20 777 aa14.53□□□□□ -0.08
VPS52-218ENST00000482399 ALDH8A1Q9H2A2 487 aaPredicted RBP14.53□□□□□ -0.08
VPS52-218ENST00000482399 TFRCP02786 760 aaKnown RBP14.53□□□□□ -0.08
VPS52-218ENST00000482399 CCDC175P0C221 793 aa14.53□□□□□ -0.08
VPS52-218ENST00000482399 PDE4BQ07343 736 aa14.53□□□□□ -0.08
VPS52-218ENST00000482399 ZSCAN26Q16670 478 aa14.53□□□□□ -0.08
VPS52-218ENST00000482399 CERS3Q8IU89 383 aa14.53□□□□□ -0.08
VPS52-218ENST00000482399 IGSF22Q8N9C0 903 aa14.53□□□□□ -0.08
VPS52-218ENST00000482399 APPBP2Q92624 585 aa14.53□□□□□ -0.08
VPS52-218ENST00000482399 PLEKHA4Q9H4M7 779 aa14.53□□□□□ -0.08
VPS52-218ENST00000482399 SH3TC1Q8TE82 1336 aa14.52□□□□□ -0.08
VPS52-218ENST00000482399 ITSN1Q15811 1721 aa14.52□□□□□ -0.08
VPS52-218ENST00000482399 N4BP3O15049 544 aa14.52□□□□□ -0.08
VPS52-218ENST00000482399 CHMP4BP1P59074 171 aa14.52□□□□□ -0.08
VPS52-218ENST00000482399 PPARDQ03181 441 aa14.52□□□□□ -0.08
VPS52-218ENST00000482399 SART3Q15020 963 aaKnown RBP14.52□□□□□ -0.08
VPS52-218ENST00000482399 TSR1Q2NL82 804 aaKnown RBP14.52□□□□□ -0.08
VPS52-218ENST00000482399 SPECC1LQ69YQ0 1117 aa14.52□□□□□ -0.08
VPS52-218ENST00000482399 VPS16Q9H269 839 aa14.52□□□□□ -0.08
VPS52-218ENST00000482399 CWC15Q9P013 229 aaKnown RBP14.52□□□□□ -0.08
VPS52-218ENST00000482399 POSTNQ15063 836 aa14.52□□□□□ -0.09
VPS52-218ENST00000482399 CAPZA3Q96KX2 299 aa14.52□□□□□ -0.09
VPS52-218ENST00000482399 SRRTQ9BXP5 876 aaKnown RBP14.52□□□□□ -0.09
VPS52-218ENST00000482399 RSPH14Q9UHP6 348 aa14.52□□□□□ -0.09
VPS52-218ENST00000482399 DACH1Q9UI36 760 aa14.52□□□□□ -0.09
VPS52-218ENST00000482399 EFCAB8A8MWE9 144 aa14.51□□□□□ -0.09
VPS52-218ENST00000482399 GRIN1Q05586 938 aa14.51□□□□□ -0.09
VPS52-218ENST00000482399 NCAPHQ15003 741 aa14.51□□□□□ -0.09
VPS52-218ENST00000482399 ATG9AQ7Z3C6 839 aa14.51□□□□□ -0.09
VPS52-218ENST00000482399 UBAC1Q9BSL1 405 aa14.51□□□□□ -0.09
VPS52-218ENST00000482399 PDE11AQ9HCR9 933 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms