RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 CCDC102BQ68D86 513 aa16.66■□□□□ 0.26
CTDSP1-208ENST00000482272 HPS5Q9UPZ3 1129 aa16.66■□□□□ 0.26
CTDSP1-208ENST00000482272 PNMA6EA0A0J9YXQ4 647 aa16.65■□□□□ 0.26
CTDSP1-208ENST00000482272 DIXDC1Q155Q3 683 aa16.65■□□□□ 0.26
CTDSP1-208ENST00000482272 ZKSCAN2Q63HK3 967 aa16.65■□□□□ 0.26
CTDSP1-208ENST00000482272 FBXO46Q6PJ61 603 aaPredicted RBP16.65■□□□□ 0.26
CTDSP1-208ENST00000482272 TMEM57Q8N5G2 664 aa16.65■□□□□ 0.26
CTDSP1-208ENST00000482272 FAM151AQ8WW52 585 aa16.65■□□□□ 0.26
CTDSP1-208ENST00000482272 CNKSR2Q8WXI2 1034 aa16.65■□□□□ 0.26
CTDSP1-208ENST00000482272 DAGLAQ9Y4D2 1042 aa16.65■□□□□ 0.26
CTDSP1-208ENST00000482272 A0A1B0GUL7 405 aa16.64■□□□□ 0.25
CTDSP1-208ENST00000482272 TFCP2Q12800 502 aa16.64■□□□□ 0.25
CTDSP1-208ENST00000482272 CDC42EP5Q6NZY7 148 aa16.64■□□□□ 0.25
CTDSP1-208ENST00000482272 MS4A4AQ96JQ5 239 aa16.64■□□□□ 0.25
CTDSP1-208ENST00000482272 PTPN18Q99952 460 aa16.64■□□□□ 0.25
CTDSP1-208ENST00000482272 ZNF341Q9BYN7 854 aa16.64■□□□□ 0.25
CTDSP1-208ENST00000482272 USP40Q9NVE5 1235 aa16.64■□□□□ 0.25
CTDSP1-208ENST00000482272 MYH2Q9UKX2 1941 aa16.64■□□□□ 0.25
CTDSP1-208ENST00000482272 RLBP1P12271 317 aa16.63■□□□□ 0.25
CTDSP1-208ENST00000482272 G3BP1Q13283 466 aaKnown RBP eCLIP16.63■□□□□ 0.25
CTDSP1-208ENST00000482272 CRHR2Q13324 411 aa16.63■□□□□ 0.25
CTDSP1-208ENST00000482272 MVPQ14764 893 aaKnown RBP16.63■□□□□ 0.25
CTDSP1-208ENST00000482272 SPTY2D1Q68D10 685 aaPredicted RBP16.63■□□□□ 0.25
CTDSP1-208ENST00000482272 MIGA2Q7L4E1 593 aa16.63■□□□□ 0.25
CTDSP1-208ENST00000482272 ERO1BQ86YB8 467 aa16.63■□□□□ 0.25
CTDSP1-208ENST00000482272 SLF2Q8IX21 1173 aa16.63■□□□□ 0.25
CTDSP1-208ENST00000482272 OTUD5Q96G74 571 aa16.63■□□□□ 0.25
CTDSP1-208ENST00000482272 XAGE2Q96GT9 111 aa16.63■□□□□ 0.25
CTDSP1-208ENST00000482272 ERO1AQ96HE7 468 aa16.63■□□□□ 0.25
CTDSP1-208ENST00000482272 NEUROD6Q96NK8 337 aa16.63■□□□□ 0.25
CTDSP1-208ENST00000482272 WRNIP1Q96S55 665 aa16.63■□□□□ 0.25
CTDSP1-208ENST00000482272 RPAP1Q9BWH6 1393 aaPredicted RBP16.63■□□□□ 0.25
CTDSP1-208ENST00000482272 CCL15-CCL14A0A0B4J2E2 113 aa16.62■□□□□ 0.25
CTDSP1-208ENST00000482272 SPDYE5A6NIY4 337 aa16.62■□□□□ 0.25
CTDSP1-208ENST00000482272 WDHD1O75717 1129 aaPredicted RBP16.62■□□□□ 0.25
CTDSP1-208ENST00000482272 SOX10P56693 466 aa16.62■□□□□ 0.25
CTDSP1-208ENST00000482272 TCP10Q12799 353 aa16.62■□□□□ 0.25
CTDSP1-208ENST00000482272 CCL15Q16663 113 aa16.62■□□□□ 0.25
CTDSP1-208ENST00000482272 GORABQ5T7V8 394 aa16.62■□□□□ 0.25
CTDSP1-208ENST00000482272 ZKSCAN4Q969J2 545 aaPredicted RBP16.62■□□□□ 0.25
CTDSP1-208ENST00000482272 ABCF2Q9UG63 623 aa16.62■□□□□ 0.25
CTDSP1-208ENST00000482272 TRIM17Q9Y577 477 aa16.62■□□□□ 0.25
CTDSP1-208ENST00000482272 PDS5AQ29RF7 1337 aaKnown RBP16.62■□□□□ 0.25
CTDSP1-208ENST00000482272 CETPP11597 493 aa16.61■□□□□ 0.25
CTDSP1-208ENST00000482272 SP3Q02447 781 aa16.61■□□□□ 0.25
CTDSP1-208ENST00000482272 NFIAQ12857 509 aa16.61■□□□□ 0.25
CTDSP1-208ENST00000482272 RASGRF1Q13972 1273 aa16.61■□□□□ 0.25
CTDSP1-208ENST00000482272 DZIP1Q86YF9 867 aaKnown RBP16.61■□□□□ 0.25
CTDSP1-208ENST00000482272 ZFYVE28Q9HCC9 887 aa16.61■□□□□ 0.25
CTDSP1-208ENST00000482272 SNCAIPQ9Y6H5 919 aa16.61■□□□□ 0.25
CTDSP1-208ENST00000482272 CAP1Q01518 475 aa16.6■□□□□ 0.25
CTDSP1-208ENST00000482272 PPATQ06203 517 aa16.6■□□□□ 0.25
CTDSP1-208ENST00000482272 ARHGEF6Q15052 776 aa16.6■□□□□ 0.25
CTDSP1-208ENST00000482272 TAF1CQ15572 869 aaPredicted RBP16.6■□□□□ 0.25
CTDSP1-208ENST00000482272 ERICH6Q7L0X2 663 aa16.6■□□□□ 0.25
CTDSP1-208ENST00000482272 ZNF384Q8TF68 577 aa16.6■□□□□ 0.25
CTDSP1-208ENST00000482272 BRI3BPQ8WY22 251 aa16.6■□□□□ 0.25
CTDSP1-208ENST00000482272 C1orf115Q9H7X2 142 aa16.6■□□□□ 0.25
CTDSP1-208ENST00000482272 DOCK2Q92608 1830 aa16.6■□□□□ 0.25
CTDSP1-208ENST00000482272 PPIL2Q13356 520 aa16.59■□□□□ 0.25
CTDSP1-208ENST00000482272 SNAPC2Q13487 334 aa16.59■□□□□ 0.25
CTDSP1-208ENST00000482272 PI16Q6UXB8 463 aa16.59■□□□□ 0.25
CTDSP1-208ENST00000482272 OTOP1Q7RTM1 612 aa16.59■□□□□ 0.25
CTDSP1-208ENST00000482272 ZFPM1Q8IX07 1006 aa16.59■□□□□ 0.25
CTDSP1-208ENST00000482272 FAM163AQ96GL9 167 aaPredicted RBP16.59■□□□□ 0.25
CTDSP1-208ENST00000482272 PCDH10Q9P2E7 1040 aa16.59■□□□□ 0.25
CTDSP1-208ENST00000482272 FAM198AQ9UFP1 575 aa16.59■□□□□ 0.25
CTDSP1-208ENST00000482272 ZBED9Q6R2W3 1325 aa16.59■□□□□ 0.25
CTDSP1-208ENST00000482272 RFX7Q2KHR2 1363 aa16.59■□□□□ 0.25
CTDSP1-208ENST00000482272 ZSWIM8A7E2V4 1837 aa16.59■□□□□ 0.25
CTDSP1-208ENST00000482272 MYO5AQ9Y4I1 1855 aaKnown RBP16.59■□□□□ 0.25
CTDSP1-208ENST00000482272 AK9Q5TCS8 1911 aa16.58■□□□□ 0.25
CTDSP1-208ENST00000482272 IRF6O14896 467 aa16.58■□□□□ 0.24
CTDSP1-208ENST00000482272 ENTPD3O75355 529 aa16.58■□□□□ 0.24
CTDSP1-208ENST00000482272 SLURP2P0DP57 97 aa16.58■□□□□ 0.24
CTDSP1-208ENST00000482272 POLA2Q14181 598 aa16.58■□□□□ 0.24
CTDSP1-208ENST00000482272 FTSJ3Q8IY81 847 aaKnown RBP16.58■□□□□ 0.24
CTDSP1-208ENST00000482272 FAM43AQ8N2R8 423 aa16.58■□□□□ 0.24
CTDSP1-208ENST00000482272 CD99L2Q8TCZ2 262 aa16.58■□□□□ 0.24
CTDSP1-208ENST00000482272 IDI2Q9BXS1 227 aa16.58■□□□□ 0.24
CTDSP1-208ENST00000482272 EFCC1Q9HA90 598 aa16.58■□□□□ 0.24
CTDSP1-208ENST00000482272 ZCCHC17Q9NP64 241 aaKnown RBP16.58■□□□□ 0.24
CTDSP1-208ENST00000482272 ZNF112Q9UJU3 913 aa16.58■□□□□ 0.24
CTDSP1-208ENST00000482272 GAKO14976 1311 aa16.58■□□□□ 0.24
CTDSP1-208ENST00000482272 HTTP42858 3142 aa16.58■□□□□ 0.24
CTDSP1-208ENST00000482272 ATRNL1Q5VV63 1379 aa16.57■□□□□ 0.24
CTDSP1-208ENST00000482272 LDHCP07864 332 aa16.57■□□□□ 0.24
CTDSP1-208ENST00000482272 INPP5BP32019 993 aa16.57■□□□□ 0.24
CTDSP1-208ENST00000482272 RGS3P49796 1198 aa16.57■□□□□ 0.24
CTDSP1-208ENST00000482272 ATP8B2P98198 1209 aa16.57■□□□□ 0.24
CTDSP1-208ENST00000482272 SPATA5Q8NB90 893 aa16.57■□□□□ 0.24
CTDSP1-208ENST00000482272 PTPN22Q9Y2R2 807 aa16.57■□□□□ 0.24
CTDSP1-208ENST00000482272 UQCRFS1P1P0C7P4 283 aa16.56■□□□□ 0.24
CTDSP1-208ENST00000482272 BTDP43251 543 aa16.56■□□□□ 0.24
CTDSP1-208ENST00000482272 GSTO1P78417 241 aa16.56■□□□□ 0.24
CTDSP1-208ENST00000482272 ZSCAN29Q8IWY8 852 aaPredicted RBP16.56■□□□□ 0.24
CTDSP1-208ENST00000482272 HMG20BQ9P0W2 317 aa16.56■□□□□ 0.24
CTDSP1-208ENST00000482272 TNRC18O15417 2968 aaPredicted RBP16.56■□□□□ 0.24
CTDSP1-208ENST00000482272 BTBD19C9JJ37 291 aa16.55■□□□□ 0.24
CTDSP1-208ENST00000482272 ZBTB7BO15156 539 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms