RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 WDR63Q8IWG1 891 aa13□□□□□ -0.33
DDX39B-220ENST00000482195 TDRD7Q8NHU6 1098 aaKnown RBP13□□□□□ -0.33
DDX39B-220ENST00000482195 SUCLG2Q96I99 432 aa13□□□□□ -0.33
DDX39B-220ENST00000482195 PUS3Q9BZE2 481 aaKnown RBP13□□□□□ -0.33
DDX39B-220ENST00000482195 ZFYVE28Q9HCC9 887 aa13□□□□□ -0.33
DDX39B-220ENST00000482195 TMOD2Q9NZR1 351 aa13□□□□□ -0.33
DDX39B-220ENST00000482195 CEP290O15078 2479 aa13□□□□□ -0.33
DDX39B-220ENST00000482195 MROH5Q6ZUA9 1318 aa12.99□□□□□ -0.33
DDX39B-220ENST00000482195 WDHD1O75717 1129 aaPredicted RBP12.99□□□□□ -0.33
DDX39B-220ENST00000482195 ALDH1L1O75891 902 aa12.99□□□□□ -0.33
DDX39B-220ENST00000482195 EN2P19622 333 aaPredicted RBP12.99□□□□□ -0.33
DDX39B-220ENST00000482195 GTF2A2P52657 109 aa12.99□□□□□ -0.33
DDX39B-220ENST00000482195 CACNB3P54284 484 aa12.99□□□□□ -0.33
DDX39B-220ENST00000482195 MAP3K9P80192 1104 aa12.99□□□□□ -0.33
DDX39B-220ENST00000482195 ARHGEF6Q15052 776 aa12.99□□□□□ -0.33
DDX39B-220ENST00000482195 SLC4A8Q2Y0W8 1093 aa12.99□□□□□ -0.33
DDX39B-220ENST00000482195 METTL24Q5JXM2 366 aa12.99□□□□□ -0.33
DDX39B-220ENST00000482195 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.99□□□□□ -0.33
DDX39B-220ENST00000482195 BRI3BPQ8WY22 251 aa12.99□□□□□ -0.33
DDX39B-220ENST00000482195 FAM84BQ96KN1 310 aaPredicted RBP12.99□□□□□ -0.33
DDX39B-220ENST00000482195 TESPA1A2RU30 521 aaPredicted RBP12.98□□□□□ -0.33
DDX39B-220ENST00000482195 CAP1Q01518 475 aa12.98□□□□□ -0.33
DDX39B-220ENST00000482195 HABP4Q5JVS0 413 aaKnown RBP12.98□□□□□ -0.33
DDX39B-220ENST00000482195 ARMC5Q96C12 935 aa12.98□□□□□ -0.33
DDX39B-220ENST00000482195 MS4A4AQ96JQ5 239 aa12.98□□□□□ -0.33
DDX39B-220ENST00000482195 TEPSINQ96N21 525 aa12.98□□□□□ -0.33
DDX39B-220ENST00000482195 PTCH2Q9Y6C5 1203 aa12.98□□□□□ -0.33
DDX39B-220ENST00000482195 KIF22Q14807 665 aa12.97□□□□□ -0.33
DDX39B-220ENST00000482195 GRIK5Q16478 980 aa12.97□□□□□ -0.33
DDX39B-220ENST00000482195 CAVIN4Q5BKX8 364 aa12.97□□□□□ -0.33
DDX39B-220ENST00000482195 NBPF11Q86T75 865 aa12.97□□□□□ -0.33
DDX39B-220ENST00000482195 FAM43AQ8N2R8 423 aa12.97□□□□□ -0.33
DDX39B-220ENST00000482195 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.97□□□□□ -0.332e-16■□□□□ 8.6
DDX39B-220ENST00000482195 TBC1D22AQ8WUA7 517 aa12.97□□□□□ -0.33
DDX39B-220ENST00000482195 TEKT1Q969V4 418 aa12.97□□□□□ -0.33
DDX39B-220ENST00000482195 WRNIP1Q96S55 665 aa12.97□□□□□ -0.33
DDX39B-220ENST00000482195 BICC1Q9H694 974 aaKnown RBP12.97□□□□□ -0.33
DDX39B-220ENST00000482195 ANP32CO43423 234 aa12.96□□□□□ -0.33
DDX39B-220ENST00000482195 NBPF7P0C2Y1 421 aaPredicted RBP12.96□□□□□ -0.33
DDX39B-220ENST00000482195 LRRC24Q50LG9 513 aa12.96□□□□□ -0.33
DDX39B-220ENST00000482195 ZNF333Q96JL9 665 aa12.96□□□□□ -0.33
DDX39B-220ENST00000482195 DOCK2Q92608 1830 aa12.95□□□□□ -0.34
DDX39B-220ENST00000482195 MAST3O60307 1309 aa12.95□□□□□ -0.34
DDX39B-220ENST00000482195 SPDYE5A6NIY4 337 aa12.95□□□□□ -0.34
DDX39B-220ENST00000482195 CETPP11597 493 aa12.95□□□□□ -0.34
DDX39B-220ENST00000482195 CD44P16070 742 aaKnown RBP12.95□□□□□ -0.34
DDX39B-220ENST00000482195 PHF12Q96QT6 1004 aa12.95□□□□□ -0.34
DDX39B-220ENST00000482195 ARHGAP39Q9C0H5 1083 aa12.95□□□□□ -0.34
DDX39B-220ENST00000482195 SNCAIPQ9Y6H5 919 aa12.95□□□□□ -0.34
DDX39B-220ENST00000482195 MGAMO43451 1857 aa12.94□□□□□ -0.34
DDX39B-220ENST00000482195 ZEB1P37275 1124 aaPredicted RBP12.94□□□□□ -0.34
DDX39B-220ENST00000482195 SNAPC2Q13487 334 aa12.94□□□□□ -0.34
DDX39B-220ENST00000482195 DCAF15Q66K64 600 aa12.94□□□□□ -0.34
DDX39B-220ENST00000482195 FBXO33Q7Z6M2 555 aa12.94□□□□□ -0.34
DDX39B-220ENST00000482195 ERO1BQ86YB8 467 aa12.94□□□□□ -0.34
DDX39B-220ENST00000482195 FAM9BQ8IZU0 186 aa12.94□□□□□ -0.34
DDX39B-220ENST00000482195 SH3TC2Q8TF17 1288 aa12.94□□□□□ -0.34
DDX39B-220ENST00000482195 ZKSCAN4Q969J2 545 aaPredicted RBP12.94□□□□□ -0.34
DDX39B-220ENST00000482195 HOOK2Q96ED9 719 aa12.94□□□□□ -0.34
DDX39B-220ENST00000482195 KAZALD1Q96I82 304 aa12.94□□□□□ -0.34
DDX39B-220ENST00000482195 RIPOR2Q9Y4F9 1068 aa12.94□□□□□ -0.34
DDX39B-220ENST00000482195 TRIOBPQ9H2D6 2365 aa12.94□□□□□ -0.34
DDX39B-220ENST00000482195 BTBD19C9JJ37 291 aa12.93□□□□□ -0.34
DDX39B-220ENST00000482195 BCAMP50895 628 aa12.93□□□□□ -0.34
DDX39B-220ENST00000482195 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.93□□□□□ -0.34
DDX39B-220ENST00000482195 KLHDC4Q8TBB5 520 aa12.93□□□□□ -0.34
DDX39B-220ENST00000482195 MYH2Q9UKX2 1941 aa12.92□□□□□ -0.34
DDX39B-220ENST00000482195 IRF6O14896 467 aa12.92□□□□□ -0.34
DDX39B-220ENST00000482195 TLR2O60603 784 aa12.92□□□□□ -0.34
DDX39B-220ENST00000482195 PDE8BO95263 885 aa12.92□□□□□ -0.34
DDX39B-220ENST00000482195 IFIT1P09914 478 aaKnown RBP12.92□□□□□ -0.34
DDX39B-220ENST00000482195 LACTBP83111 547 aaPredicted RBP12.92□□□□□ -0.34
DDX39B-220ENST00000482195 HDLBPQ00341 1268 aaKnown RBP12.92□□□□□ -0.34
DDX39B-220ENST00000482195 PPIL2Q13356 520 aa12.92□□□□□ -0.34
DDX39B-220ENST00000482195 PUM3Q15397 648 aaKnown RBP12.92□□□□□ -0.34
DDX39B-220ENST00000482195 MIGA2Q7L4E1 593 aa12.92□□□□□ -0.34
DDX39B-220ENST00000482195 ANKRD44Q8N8A2 993 aa12.92□□□□□ -0.34
DDX39B-220ENST00000482195 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.92□□□□□ -0.34
DDX39B-220ENST00000482195 ZDHHC15Q96MV8 337 aa12.92□□□□□ -0.34
DDX39B-220ENST00000482195 ZNF341Q9BYN7 854 aa12.92□□□□□ -0.34
DDX39B-220ENST00000482195 RPAP1Q9BWH6 1393 aaPredicted RBP12.92□□□□□ -0.34
DDX39B-220ENST00000482195 SLC5A1P13866 664 aa12.91□□□□□ -0.34
DDX39B-220ENST00000482195 RABL6Q3YEC7 729 aaPredicted RBP12.91□□□□□ -0.34
DDX39B-220ENST00000482195 FAM83AQ86UY5 434 aa12.91□□□□□ -0.34
DDX39B-220ENST00000482195 CPA4Q9UI42 421 aa12.91□□□□□ -0.34
DDX39B-220ENST00000482195 UTYO14607 1347 aa12.9□□□□□ -0.34
DDX39B-220ENST00000482195 INPP5BP32019 993 aa12.9□□□□□ -0.34
DDX39B-220ENST00000482195 TCP10Q12799 353 aa12.9□□□□□ -0.34
DDX39B-220ENST00000482195 APOBEC3HQ6NTF7 200 aaKnown RBP12.9□□□□□ -0.34
DDX39B-220ENST00000482195 VGLL2Q8N8G2 317 aa12.9□□□□□ -0.34
DDX39B-220ENST00000482195 ZCCHC17Q9NP64 241 aaKnown RBP12.9□□□□□ -0.34
DDX39B-220ENST00000482195 FMNL1O95466 1100 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-220ENST00000482195 FXR1P51114 621 aaKnown RBP eCLIP12.89□□□□□ -0.35
DDX39B-220ENST00000482195 PPATQ06203 517 aa12.89□□□□□ -0.35
DDX39B-220ENST00000482195 FKBP1CQ5VVH2 108 aa12.89□□□□□ -0.35
DDX39B-220ENST00000482195 HHIPL2Q6UWX4 724 aa12.89□□□□□ -0.35
DDX39B-220ENST00000482195 RAET1EQ8TD07 263 aa12.89□□□□□ -0.35
DDX39B-220ENST00000482195 BIN2Q9UBW5 565 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-220ENST00000482195 COLQQ9Y215 455 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-220ENST00000482195 SUGT1Q9Y2Z0 365 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms