RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 CXorf38Q8TB03 319 aa12.97□□□□□ -0.33
TRIM27-205ENST00000481474 ATP1A2P50993 1020 aa12.97□□□□□ -0.33
TRIM27-205ENST00000481474 PPP4R3BQ5MIZ7 849 aa12.97□□□□□ -0.33
TRIM27-205ENST00000481474 STK10O94804 968 aaKnown RBP12.97□□□□□ -0.33
TRIM27-205ENST00000481474 IFI16Q16666 785 aaKnown RBP12.97□□□□□ -0.33
TRIM27-205ENST00000481474 DPP9Q86TI2 863 aa12.97□□□□□ -0.33
TRIM27-205ENST00000481474 MX2P20592 715 aa12.97□□□□□ -0.33
TRIM27-205ENST00000481474 ANGPTL8Q6UXH0 198 aa12.97□□□□□ -0.33
TRIM27-205ENST00000481474 MLXIPQ9HAP2 919 aa12.97□□□□□ -0.33
TRIM27-205ENST00000481474 CAPN12Q6ZSI9 719 aa12.97□□□□□ -0.33
TRIM27-205ENST00000481474 TRIM31Q9BZY9 425 aa12.97□□□□□ -0.33
TRIM27-205ENST00000481474 ANO10Q9NW15 660 aa12.97□□□□□ -0.33
TRIM27-205ENST00000481474 LMTK3Q96Q04 1460 aa12.97□□□□□ -0.33
TRIM27-205ENST00000481474 ANO6Q4KMQ2 910 aa12.96□□□□□ -0.33
TRIM27-205ENST00000481474 DNAJC7Q99615 494 aa12.96□□□□□ -0.33
TRIM27-205ENST00000481474 FAM95CA0A1B0GW59 222 aa12.96□□□□□ -0.33
TRIM27-205ENST00000481474 K7ELQ4 463 aaPredicted RBP12.96□□□□□ -0.33
TRIM27-205ENST00000481474 FIS1Q9Y3D6 152 aa12.96□□□□□ -0.33
TRIM27-205ENST00000481474 DNM2P50570 870 aa12.96□□□□□ -0.33
TRIM27-205ENST00000481474 SUGCTQ9HAC7 445 aa12.96□□□□□ -0.33
TRIM27-205ENST00000481474 PIDD1Q9HB75 910 aa12.96□□□□□ -0.33
TRIM27-205ENST00000481474 RAD18Q9NS91 495 aa12.96□□□□□ -0.33
TRIM27-205ENST00000481474 HS2ST1Q7LGA3 356 aa12.96□□□□□ -0.33
TRIM27-205ENST00000481474 NIM1KQ8IY84 436 aa12.96□□□□□ -0.33
TRIM27-205ENST00000481474 ARHGEF1Q92888 912 aaKnown RBP12.96□□□□□ -0.33
TRIM27-205ENST00000481474 TCP10L2B9ZVM9 353 aa12.96□□□□□ -0.34
TRIM27-205ENST00000481474 CLNS1AP54105 237 aaKnown RBP12.96□□□□□ -0.34
TRIM27-205ENST00000481474 CLUL1Q15846 466 aa12.96□□□□□ -0.34
TRIM27-205ENST00000481474 NCAPH2Q6IBW4 605 aa12.96□□□□□ -0.34
TRIM27-205ENST00000481474 NUDT16Q96DE0 195 aaKnown RBP12.96□□□□□ -0.34
TRIM27-205ENST00000481474 CEP164Q9UPV0 1460 aa12.96□□□□□ -0.34
TRIM27-205ENST00000481474 ZNF644Q9H582 1327 aaPredicted RBP12.96□□□□□ -0.34
TRIM27-205ENST00000481474 SPOPO43791 374 aa12.96□□□□□ -0.34
TRIM27-205ENST00000481474 ZNF18P17022 549 aa12.96□□□□□ -0.34
TRIM27-205ENST00000481474 PRPHP41219 470 aa12.96□□□□□ -0.34
TRIM27-205ENST00000481474 ZNF131P52739 623 aa12.96□□□□□ -0.34
TRIM27-205ENST00000481474 SEMA3FQ13275 785 aa12.96□□□□□ -0.34
TRIM27-205ENST00000481474 PALM2Q8IXS6 379 aa12.96□□□□□ -0.34
TRIM27-205ENST00000481474 TRIM56Q9BRZ2 755 aaKnown RBP12.96□□□□□ -0.34
TRIM27-205ENST00000481474 HPS4Q9NQG7 708 aa12.96□□□□□ -0.34
TRIM27-205ENST00000481474 TESPA1A2RU30 521 aaPredicted RBP12.95□□□□□ -0.34
TRIM27-205ENST00000481474 MYBP10242 640 aa12.95□□□□□ -0.34
TRIM27-205ENST00000481474 LDHBP07195 334 aaKnown RBP12.95□□□□□ -0.34
TRIM27-205ENST00000481474 MVPQ14764 893 aaKnown RBP12.95□□□□□ -0.34
TRIM27-205ENST00000481474 CHD1LQ86WJ1 897 aa12.95□□□□□ -0.34
TRIM27-205ENST00000481474 MYO1AQ9UBC5 1043 aa12.95□□□□□ -0.34
TRIM27-205ENST00000481474 DMRT2Q9Y5R5 561 aa12.95□□□□□ -0.34
TRIM27-205ENST00000481474 FBXW10Q5XX13 1052 aa12.95□□□□□ -0.34
TRIM27-205ENST00000481474 DZIP3Q86Y13 1208 aaKnown RBP12.95□□□□□ -0.34
TRIM27-205ENST00000481474 KIF1BPQ96EK5 621 aa12.95□□□□□ -0.34
TRIM27-205ENST00000481474 RBM17Q96I25 401 aaKnown RBP12.95□□□□□ -0.34
TRIM27-205ENST00000481474 MMTAG2Q9BU76 263 aaKnown RBP12.95□□□□□ -0.34
TRIM27-205ENST00000481474 RSPH14Q9UHP6 348 aa12.95□□□□□ -0.34
TRIM27-205ENST00000481474 KCNH5Q8NCM2 988 aa12.95□□□□□ -0.34
TRIM27-205ENST00000481474 PTPROQ16827 1216 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 MAPK8IP1Q9UQF2 711 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 CCDC18Q5T9S5 1454 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 GOLGA8CPA6NN73 597 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 CFBP00751 764 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 GOLGA8FQ08AF8 430 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 GOLGA8DPQ0D2H9 430 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 HACD3Q9P035 362 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.94□□□□□ -0.346e-13■□□□□ 9.2
TRIM27-205ENST00000481474 LETM2Q2VYF4 491 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 SIX5Q8N196 739 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 PPIP5K2O43314 1243 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 N4BP1O75113 896 aaKnown RBP12.94□□□□□ -0.34
TRIM27-205ENST00000481474 NBPF7P0C2Y1 421 aaPredicted RBP12.94□□□□□ -0.34
TRIM27-205ENST00000481474 MCM6Q14566 821 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 RTN1Q16799 776 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 HACE1Q8IYU2 909 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 NME8Q8N427 588 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 NECAB1Q8N987 351 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 KRT23Q9C075 422 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 STIM2Q9P246 746 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 KLF18A0A0U1RQI7 1052 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 DCUN1D2Q6PH85 259 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 RPS6KC1Q96S38 1066 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 PPP1R12CQ9BZL4 782 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 LZTFL1Q9NQ48 299 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 HSPA4P34932 840 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 TPTE2Q6XPS3 522 aa12.94□□□□□ -0.34
TRIM27-205ENST00000481474 VGLL3A8MV65 326 aa12.93□□□□□ -0.34
TRIM27-205ENST00000481474 NPR1P16066 1061 aa12.93□□□□□ -0.34
TRIM27-205ENST00000481474 GNG11P61952 73 aa12.93□□□□□ -0.34
TRIM27-205ENST00000481474 PHLDB2Q86SQ0 1253 aa12.93□□□□□ -0.34
TRIM27-205ENST00000481474 ZNF692Q9BU19 519 aaPredicted RBP12.93□□□□□ -0.34
TRIM27-205ENST00000481474 TRAIPQ9BWF2 469 aa12.93□□□□□ -0.34
TRIM27-205ENST00000481474 PNMA2Q9UL42 364 aa12.93□□□□□ -0.34
TRIM27-205ENST00000481474 ZBED4O75132 1171 aa12.93□□□□□ -0.34
TRIM27-205ENST00000481474 FMN1Q68DA7 1419 aa12.93□□□□□ -0.34
TRIM27-205ENST00000481474 AMOTL2Q9Y2J4 779 aa12.93□□□□□ -0.34
TRIM27-205ENST00000481474 MGEA5O60502 916 aa12.93□□□□□ -0.34
TRIM27-205ENST00000481474 ALKBH2Q6NS38 261 aa12.93□□□□□ -0.34
TRIM27-205ENST00000481474 ATP2A3Q93084 1043 aa12.93□□□□□ -0.34
TRIM27-205ENST00000481474 HDAC11Q96DB2 347 aa12.93□□□□□ -0.34
TRIM27-205ENST00000481474 ZSCAN31Q96LW9 406 aaPredicted RBP12.93□□□□□ -0.34
TRIM27-205ENST00000481474 RAB3IPQ96QF0 476 aaPredicted RBP12.93□□□□□ -0.34
TRIM27-205ENST00000481474 SRPK1Q96SB4 655 aaKnown RBP12.93□□□□□ -0.34
TRIM27-205ENST00000481474 CCNT1O60563 726 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms