RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 PRO3102Q9H379 93 aa12.43□□□□□ -0.42
GPNMB-211ENST00000479625 TLR2O60603 784 aa12.42□□□□□ -0.42
GPNMB-211ENST00000479625 CSF1RP07333 972 aa12.42□□□□□ -0.42
GPNMB-211ENST00000479625 FKBP1AP62942 108 aaKnown RBP12.42□□□□□ -0.42
GPNMB-211ENST00000479625 GCKRQ14397 625 aa12.42□□□□□ -0.42
GPNMB-211ENST00000479625 C15orf52Q6ZUT6 534 aaKnown RBP12.42□□□□□ -0.42
GPNMB-211ENST00000479625 TAOK2Q9UL54 1235 aa12.42□□□□□ -0.42
GPNMB-211ENST00000479625 BOLA1Q9Y3E2 137 aa12.42□□□□□ -0.42
GPNMB-211ENST00000479625 STK24Q9Y6E0 443 aa12.42□□□□□ -0.42
GPNMB-211ENST00000479625 SNCAIPQ9Y6H5 919 aa12.42□□□□□ -0.42
GPNMB-211ENST00000479625 AK9Q5TCS8 1911 aa12.41□□□□□ -0.42
GPNMB-211ENST00000479625 ANKRD18BA2A2Z9 1011 aa12.41□□□□□ -0.42
GPNMB-211ENST00000479625 SPDYE5A6NIY4 337 aa12.41□□□□□ -0.42
GPNMB-211ENST00000479625 BTBD19C9JJ37 291 aa12.41□□□□□ -0.42
GPNMB-211ENST00000479625 SOX1O00570 391 aaPredicted RBP12.41□□□□□ -0.42
GPNMB-211ENST00000479625 APAF1O14727 1248 aa12.41□□□□□ -0.42
GPNMB-211ENST00000479625 TNFAIP1Q13829 316 aa12.41□□□□□ -0.42
GPNMB-211ENST00000479625 KIF22Q14807 665 aa12.41□□□□□ -0.42
GPNMB-211ENST00000479625 UBE2Q1Q7Z7E8 422 aa12.41□□□□□ -0.42
GPNMB-211ENST00000479625 TSR2Q969E8 191 aaKnown RBP12.41□□□□□ -0.42
GPNMB-211ENST00000479625 TTF2Q9UNY4 1162 aaKnown RBP12.41□□□□□ -0.42
GPNMB-211ENST00000479625 CSADQ9Y600 493 aa12.41□□□□□ -0.42
GPNMB-211ENST00000479625 DOCK2Q92608 1830 aa12.41□□□□□ -0.42
GPNMB-211ENST00000479625 CACNB3P54284 484 aa12.4□□□□□ -0.42
GPNMB-211ENST00000479625 MAP3K9P80192 1104 aa12.4□□□□□ -0.42
GPNMB-211ENST00000479625 MFSD14BQ5SR56 506 aa12.4□□□□□ -0.42
GPNMB-211ENST00000479625 LRCH3Q96II8 777 aa12.4□□□□□ -0.42
GPNMB-211ENST00000479625 CHMP3Q9Y3E7 222 aa12.4□□□□□ -0.42
GPNMB-211ENST00000479625 PTPRFP10586 1907 aa12.4□□□□□ -0.42
GPNMB-211ENST00000479625 STK25O00506 426 aa12.39□□□□□ -0.43
GPNMB-211ENST00000479625 IRF6O14896 467 aa12.39□□□□□ -0.43
GPNMB-211ENST00000479625 PLIN1O60240 522 aa12.39□□□□□ -0.43
GPNMB-211ENST00000479625 CCL5P13501 91 aa12.39□□□□□ -0.43
GPNMB-211ENST00000479625 OSBPP22059 807 aa12.39□□□□□ -0.43
GPNMB-211ENST00000479625 GRIK5Q16478 980 aa12.39□□□□□ -0.43
GPNMB-211ENST00000479625 DZIP1LQ8IYY4 767 aaKnown RBP12.39□□□□□ -0.43
GPNMB-211ENST00000479625 ZKSCAN4Q969J2 545 aaPredicted RBP12.39□□□□□ -0.43
GPNMB-211ENST00000479625 ZNF594Q96JF6 807 aaPredicted RBP12.39□□□□□ -0.43
GPNMB-211ENST00000479625 TRIM47Q96LD4 638 aa12.39□□□□□ -0.43
GPNMB-211ENST00000479625 STK31Q9BXU1 1019 aa12.39□□□□□ -0.43
GPNMB-211ENST00000479625 CPA4Q9UI42 421 aa12.39□□□□□ -0.43
GPNMB-211ENST00000479625 FAM205AQ6ZU69 1335 aa12.38□□□□□ -0.43
GPNMB-211ENST00000479625 MYPNQ86TC9 1320 aa12.38□□□□□ -0.43
GPNMB-211ENST00000479625 ADGRA2Q96PE1 1338 aa12.38□□□□□ -0.43
GPNMB-211ENST00000479625 CETPP11597 493 aa12.38□□□□□ -0.43
GPNMB-211ENST00000479625 CRKP46108 304 aa12.38□□□□□ -0.43
GPNMB-211ENST00000479625 FOXO4P98177 505 aa12.38□□□□□ -0.43
GPNMB-211ENST00000479625 WRNIP1Q96S55 665 aa12.38□□□□□ -0.43
GPNMB-211ENST00000479625 SERPINA10Q9UK55 444 aa12.38□□□□□ -0.43
GPNMB-211ENST00000479625 RIPOR2Q9Y4F9 1068 aa12.38□□□□□ -0.43
GPNMB-211ENST00000479625 ZBTB7BO15156 539 aaPredicted RBP12.37□□□□□ -0.43
GPNMB-211ENST00000479625 WDHD1O75717 1129 aaPredicted RBP12.37□□□□□ -0.43
GPNMB-211ENST00000479625 GNRH1P01148 92 aa12.37□□□□□ -0.43
GPNMB-211ENST00000479625 GRK4P32298 578 aa12.37□□□□□ -0.43
GPNMB-211ENST00000479625 PSMC4P43686 418 aa12.37□□□□□ -0.43
GPNMB-211ENST00000479625 GYG1P46976 350 aa12.37□□□□□ -0.43
GPNMB-211ENST00000479625 GJA8P48165 433 aa12.37□□□□□ -0.43
GPNMB-211ENST00000479625 TNNI2P48788 182 aa12.37□□□□□ -0.43
GPNMB-211ENST00000479625 PRMT2P55345 433 aa12.37□□□□□ -0.43
GPNMB-211ENST00000479625 CALD1Q05682 793 aaKnown RBP12.37□□□□□ -0.43
GPNMB-211ENST00000479625 IFIT5Q13325 482 aaKnown RBP12.37□□□□□ -0.43
GPNMB-211ENST00000479625 C17orf99Q6UX52 265 aa12.37□□□□□ -0.43
GPNMB-211ENST00000479625 ERO1BQ86YB8 467 aa12.37□□□□□ -0.43
GPNMB-211ENST00000479625 HTATIP2Q9BUP3 242 aa12.37□□□□□ -0.43
GPNMB-211ENST00000479625 MYH16Q9H6N6 1097 aa12.37□□□□□ -0.43
GPNMB-211ENST00000479625 ZCCHC17Q9NP64 241 aaKnown RBP12.37□□□□□ -0.43
GPNMB-211ENST00000479625 SRRDQ9UH36 339 aa12.37□□□□□ -0.43
GPNMB-211ENST00000479625 PHIPQ8WWQ0 1821 aa12.37□□□□□ -0.43
GPNMB-211ENST00000479625 DDX60LQ5H9U9 1706 aaKnown RBP12.37□□□□□ -0.43
GPNMB-211ENST00000479625 EYSQ5T1H1 3165 aa12.36□□□□□ -0.43
GPNMB-211ENST00000479625 ST18O60284 1047 aa12.36□□□□□ -0.43
GPNMB-211ENST00000479625 FARP2O94887 1054 aaPredicted RBP12.36□□□□□ -0.43
GPNMB-211ENST00000479625 GJB1P08034 283 aa12.36□□□□□ -0.43
GPNMB-211ENST00000479625 FLIIQ13045 1269 aa12.36□□□□□ -0.43
GPNMB-211ENST00000479625 PPIL2Q13356 520 aa12.36□□□□□ -0.43
GPNMB-211ENST00000479625 FKBP5Q13451 457 aaPredicted RBP12.36□□□□□ -0.43
GPNMB-211ENST00000479625 SNAPC2Q13487 334 aa12.36□□□□□ -0.43
GPNMB-211ENST00000479625 EPHA10Q5JZY3 1008 aa12.36□□□□□ -0.43
GPNMB-211ENST00000479625 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.36□□□□□ -0.43
GPNMB-211ENST00000479625 TDRD7Q8NHU6 1098 aaKnown RBP12.36□□□□□ -0.43
GPNMB-211ENST00000479625 RAET1EQ8TD07 263 aa12.36□□□□□ -0.43
GPNMB-211ENST00000479625 DNAAF4Q8WXU2 420 aa12.36□□□□□ -0.43
GPNMB-211ENST00000479625 RNF208Q9H0X6 261 aa12.36□□□□□ -0.43
GPNMB-211ENST00000479625 IQSEC3Q9UPP2 1182 aaPredicted RBP12.36□□□□□ -0.43
GPNMB-211ENST00000479625 FMNL1O95466 1100 aaPredicted RBP12.35□□□□□ -0.43
GPNMB-211ENST00000479625 PRKCZQ05513 592 aa12.35□□□□□ -0.43
GPNMB-211ENST00000479625 TWISTNBQ3B726 338 aaPredicted RBP12.35□□□□□ -0.43
GPNMB-211ENST00000479625 LINS1Q8NG48 757 aa12.35□□□□□ -0.43
GPNMB-211ENST00000479625 NKX2-3Q8TAU0 364 aa12.35□□□□□ -0.43
GPNMB-211ENST00000479625 UNC93B1Q9H1C4 597 aa12.35□□□□□ -0.43
GPNMB-211ENST00000479625 CNNM1Q9NRU3 951 aa12.35□□□□□ -0.43
GPNMB-211ENST00000479625 DOCK1Q14185 1865 aa12.35□□□□□ -0.43
GPNMB-211ENST00000479625 PDHXO00330 501 aa12.34□□□□□ -0.43
GPNMB-211ENST00000479625 INPP5BP32019 993 aa12.34□□□□□ -0.43
GPNMB-211ENST00000479625 CHAF1AQ13111 956 aaPredicted RBP12.34□□□□□ -0.43
GPNMB-211ENST00000479625 TAF7LQ5H9L4 462 aa12.34□□□□□ -0.43
GPNMB-211ENST00000479625 LMBR1LQ6UX01 489 aa12.34□□□□□ -0.43
GPNMB-211ENST00000479625 LDHAL6AQ6ZMR3 332 aa12.34□□□□□ -0.43
GPNMB-211ENST00000479625 U2AF1L4Q8WU68 220 aaKnown RBP12.34□□□□□ -0.43
GPNMB-211ENST00000479625 FAM84BQ96KN1 310 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms