RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 A0A1B0GUL7 405 aa17.74■□□□□ 0.43
ATG4B-218ENST00000479554 TFCP2Q12800 502 aa17.74■□□□□ 0.43
ATG4B-218ENST00000479554 ZGPATQ8N5A5 531 aaKnown RBP17.74■□□□□ 0.43
ATG4B-218ENST00000479554 WRNIP1Q96S55 665 aa17.74■□□□□ 0.43
ATG4B-218ENST00000479554 TESPA1A2RU30 521 aaPredicted RBP17.73■□□□□ 0.43
ATG4B-218ENST00000479554 ZBTB22O15209 634 aa17.73■□□□□ 0.43
ATG4B-218ENST00000479554 RASGRF1Q13972 1273 aa17.73■□□□□ 0.43
ATG4B-218ENST00000479554 MVPQ14764 893 aaKnown RBP17.73■□□□□ 0.43
ATG4B-218ENST00000479554 DCAF15Q66K64 600 aa17.73■□□□□ 0.43
ATG4B-218ENST00000479554 CDC42EP5Q6NZY7 148 aa17.73■□□□□ 0.43
ATG4B-218ENST00000479554 TMEM57Q8N5G2 664 aa17.73■□□□□ 0.43
ATG4B-218ENST00000479554 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
ATG4B-218ENST00000479554 PDS5AQ29RF7 1337 aaKnown RBP17.72■□□□□ 0.43
ATG4B-218ENST00000479554 DZIP1Q86YF9 867 aaKnown RBP17.72■□□□□ 0.43
ATG4B-218ENST00000479554 FAM151AQ8WW52 585 aa17.72■□□□□ 0.43
ATG4B-218ENST00000479554 OTUD5Q96G74 571 aa17.72■□□□□ 0.43
ATG4B-218ENST00000479554 XAGE2Q96GT9 111 aa17.72■□□□□ 0.43
ATG4B-218ENST00000479554 HPS5Q9UPZ3 1129 aa17.72■□□□□ 0.43
ATG4B-218ENST00000479554 SNCAIPQ9Y6H5 919 aa17.72■□□□□ 0.43
ATG4B-218ENST00000479554 CCL15-CCL14A0A0B4J2E2 113 aa17.71■□□□□ 0.43
ATG4B-218ENST00000479554 PNMA6EA0A0J9YXQ4 647 aa17.71■□□□□ 0.43
ATG4B-218ENST00000479554 SPDYE5A6NIY4 337 aa17.71■□□□□ 0.43
ATG4B-218ENST00000479554 GTF2A2P52657 109 aa17.71■□□□□ 0.43
ATG4B-218ENST00000479554 SOX10P56693 466 aa17.71■□□□□ 0.43
ATG4B-218ENST00000479554 TCP10Q12799 353 aa17.71■□□□□ 0.43
ATG4B-218ENST00000479554 CRHR2Q13324 411 aa17.71■□□□□ 0.43
ATG4B-218ENST00000479554 CCL15Q16663 113 aa17.71■□□□□ 0.43
ATG4B-218ENST00000479554 FTSJ3Q8IY81 847 aaKnown RBP17.71■□□□□ 0.43
ATG4B-218ENST00000479554 MS4A4AQ96JQ5 239 aa17.71■□□□□ 0.43
ATG4B-218ENST00000479554 NEUROD6Q96NK8 337 aa17.71■□□□□ 0.43
ATG4B-218ENST00000479554 PTPN18Q99952 460 aa17.71■□□□□ 0.43
ATG4B-218ENST00000479554 ZNF341Q9BYN7 854 aa17.71■□□□□ 0.43
ATG4B-218ENST00000479554 USP40Q9NVE5 1235 aa17.71■□□□□ 0.43
ATG4B-218ENST00000479554 ABCF2Q9UG63 623 aa17.71■□□□□ 0.43
ATG4B-218ENST00000479554 HTTP42858 3142 aa17.71■□□□□ 0.43
ATG4B-218ENST00000479554 TNRC18O15417 2968 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-218ENST00000479554 NFIAQ12857 509 aa17.7■□□□□ 0.42
ATG4B-218ENST00000479554 G3BP1Q13283 466 aaKnown RBP eCLIP17.7■□□□□ 0.42
ATG4B-218ENST00000479554 SPTY2D1Q68D10 685 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-218ENST00000479554 FBXO46Q6PJ61 603 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-218ENST00000479554 BRI3BPQ8WY22 251 aa17.7■□□□□ 0.42
ATG4B-218ENST00000479554 ZKSCAN4Q969J2 545 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-218ENST00000479554 GAKO14976 1311 aa17.7■□□□□ 0.42
ATG4B-218ENST00000479554 MYH2Q9UKX2 1941 aa17.69■□□□□ 0.42
ATG4B-218ENST00000479554 GORABQ5T7V8 394 aa17.69■□□□□ 0.42
ATG4B-218ENST00000479554 MIGA2Q7L4E1 593 aa17.69■□□□□ 0.42
ATG4B-218ENST00000479554 ERO1BQ86YB8 467 aa17.69■□□□□ 0.42
ATG4B-218ENST00000479554 SLF2Q8IX21 1173 aa17.69■□□□□ 0.42
ATG4B-218ENST00000479554 FAM198AQ9UFP1 575 aa17.69■□□□□ 0.42
ATG4B-218ENST00000479554 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.69■□□□□ 0.42
ATG4B-218ENST00000479554 ZBED9Q6R2W3 1325 aa17.69■□□□□ 0.42
ATG4B-218ENST00000479554 ERO1AQ96HE7 468 aa17.68■□□□□ 0.42
ATG4B-218ENST00000479554 TRIM17Q9Y577 477 aa17.68■□□□□ 0.42
ATG4B-218ENST00000479554 INPP5BP32019 993 aa17.67■□□□□ 0.42
ATG4B-218ENST00000479554 PPIL2Q13356 520 aa17.67■□□□□ 0.42
ATG4B-218ENST00000479554 TAF1CQ15572 869 aaPredicted RBP17.67■□□□□ 0.42
ATG4B-218ENST00000479554 ERICH6Q7L0X2 663 aa17.67■□□□□ 0.42
ATG4B-218ENST00000479554 ITPRIPQ8IWB1 547 aa17.67■□□□□ 0.42
ATG4B-218ENST00000479554 DOCK2Q92608 1830 aa17.67■□□□□ 0.42
ATG4B-218ENST00000479554 RFX7Q2KHR2 1363 aa17.66■□□□□ 0.42
ATG4B-218ENST00000479554 AK9Q5TCS8 1911 aa17.66■□□□□ 0.42
ATG4B-218ENST00000479554 CETPP11597 493 aa17.66■□□□□ 0.42
ATG4B-218ENST00000479554 RGS3P49796 1198 aa17.66■□□□□ 0.42
ATG4B-218ENST00000479554 OS9Q13438 667 aaPredicted RBP17.66■□□□□ 0.42
ATG4B-218ENST00000479554 SNAPC2Q13487 334 aa17.66■□□□□ 0.42
ATG4B-218ENST00000479554 POLA2Q14181 598 aa17.66■□□□□ 0.42
ATG4B-218ENST00000479554 OTOP1Q7RTM1 612 aa17.66■□□□□ 0.42
ATG4B-218ENST00000479554 FAM43AQ8N2R8 423 aa17.66■□□□□ 0.42
ATG4B-218ENST00000479554 CD99L2Q8TCZ2 262 aa17.66■□□□□ 0.42
ATG4B-218ENST00000479554 IDI2Q9BXS1 227 aa17.66■□□□□ 0.42
ATG4B-218ENST00000479554 C1orf115Q9H7X2 142 aa17.66■□□□□ 0.42
ATG4B-218ENST00000479554 ZFYVE28Q9HCC9 887 aa17.66■□□□□ 0.42
ATG4B-218ENST00000479554 HMG20BQ9P0W2 317 aa17.66■□□□□ 0.42
ATG4B-218ENST00000479554 MROH7-TTC4A0A0A0MT08 1334 aa17.66■□□□□ 0.42
ATG4B-218ENST00000479554 IRF6O14896 467 aa17.65■□□□□ 0.42
ATG4B-218ENST00000479554 ENTPD3O75355 529 aa17.65■□□□□ 0.42
ATG4B-218ENST00000479554 WDHD1O75717 1129 aaPredicted RBP17.65■□□□□ 0.42
ATG4B-218ENST00000479554 ARID4AP29374 1257 aaPredicted RBP17.65■□□□□ 0.42
ATG4B-218ENST00000479554 BTDP43251 543 aa17.65■□□□□ 0.42
ATG4B-218ENST00000479554 SP3Q02447 781 aa17.65■□□□□ 0.42
ATG4B-218ENST00000479554 MECOMQ03112 1051 aa17.65■□□□□ 0.42
ATG4B-218ENST00000479554 PPATQ06203 517 aa17.65■□□□□ 0.42
ATG4B-218ENST00000479554 PI16Q6UXB8 463 aa17.65■□□□□ 0.42
ATG4B-218ENST00000479554 ZFPM1Q8IX07 1006 aa17.65■□□□□ 0.42
ATG4B-218ENST00000479554 SPATA5Q8NB90 893 aa17.65■□□□□ 0.42
ATG4B-218ENST00000479554 FAM163AQ96GL9 167 aaPredicted RBP17.65■□□□□ 0.42
ATG4B-218ENST00000479554 ZNF112Q9UJU3 913 aa17.65■□□□□ 0.42
ATG4B-218ENST00000479554 RLBP1P12271 317 aa17.64■□□□□ 0.41
ATG4B-218ENST00000479554 ATP8B2P98198 1209 aa17.64■□□□□ 0.41
ATG4B-218ENST00000479554 ZSCAN29Q8IWY8 852 aaPredicted RBP17.64■□□□□ 0.41
ATG4B-218ENST00000479554 SSH3Q8TE77 659 aa17.64■□□□□ 0.41
ATG4B-218ENST00000479554 ZCCHC17Q9NP64 241 aaKnown RBP17.64■□□□□ 0.41
ATG4B-218ENST00000479554 UQCRFS1P1P0C7P4 283 aa17.63■□□□□ 0.41
ATG4B-218ENST00000479554 GSTO1P78417 241 aa17.63■□□□□ 0.41
ATG4B-218ENST00000479554 NOL9Q5SY16 702 aaKnown RBP17.63■□□□□ 0.41
ATG4B-218ENST00000479554 EFCC1Q9HA90 598 aa17.63■□□□□ 0.41
ATG4B-218ENST00000479554 GPR108Q9NPR9 543 aa17.63■□□□□ 0.41
ATG4B-218ENST00000479554 CENPFP49454 3210 aa17.63■□□□□ 0.41
ATG4B-218ENST00000479554 ATRNL1Q5VV63 1379 aa17.63■□□□□ 0.41
ATG4B-218ENST00000479554 BTBD19C9JJ37 291 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms