RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 WRNIP1Q96S55 665 aa16.65■□□□□ 0.26
ABCF1-206ENST00000479542 ZNF341Q9BYN7 854 aa16.65■□□□□ 0.26
ABCF1-206ENST00000479542 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.65■□□□□ 0.26
ABCF1-206ENST00000479542 IQSEC3Q9UPP2 1182 aaPredicted RBP16.65■□□□□ 0.26
ABCF1-206ENST00000479542 HDAC5Q9UQL6 1122 aa16.65■□□□□ 0.26
ABCF1-206ENST00000479542 SALL1Q9NSC2 1324 aa16.65■□□□□ 0.26
ABCF1-206ENST00000479542 BTBD19C9JJ37 291 aa16.64■□□□□ 0.25
ABCF1-206ENST00000479542 CIAO1O76071 339 aa16.64■□□□□ 0.25
ABCF1-206ENST00000479542 SLC5A1P13866 664 aa16.64■□□□□ 0.25
ABCF1-206ENST00000479542 LACTBP83111 547 aaPredicted RBP16.64■□□□□ 0.25
ABCF1-206ENST00000479542 KIF22Q14807 665 aa16.64■□□□□ 0.25
ABCF1-206ENST00000479542 SLC9C1Q4G0N8 1177 aa16.64■□□□□ 0.25
ABCF1-206ENST00000479542 SSH1Q8WYL5 1049 aa16.64■□□□□ 0.25
ABCF1-206ENST00000479542 KCNH4Q9UQ05 1017 aa16.64■□□□□ 0.25
ABCF1-206ENST00000479542 SEMA3EO15041 775 aa16.63■□□□□ 0.25
ABCF1-206ENST00000479542 CT47B1P0C2W7 299 aaPredicted RBP16.63■□□□□ 0.25
ABCF1-206ENST00000479542 EN2P19622 333 aaPredicted RBP16.63■□□□□ 0.25
ABCF1-206ENST00000479542 SLFN5Q08AF3 891 aa16.63■□□□□ 0.25
ABCF1-206ENST00000479542 NOL9Q5SY16 702 aaKnown RBP16.63■□□□□ 0.25
ABCF1-206ENST00000479542 C17orf99Q6UX52 265 aa16.63■□□□□ 0.25
ABCF1-206ENST00000479542 ATG9AQ7Z3C6 839 aa16.63■□□□□ 0.25
ABCF1-206ENST00000479542 ANKRD23Q86SG2 305 aa16.63■□□□□ 0.25
ABCF1-206ENST00000479542 ZKSCAN4Q969J2 545 aaPredicted RBP16.63■□□□□ 0.25
ABCF1-206ENST00000479542 CACNB3P54284 484 aa16.62■□□□□ 0.25
ABCF1-206ENST00000479542 HABP4Q5JVS0 413 aaKnown RBP16.62■□□□□ 0.25
ABCF1-206ENST00000479542 KLHDC4Q8TBB5 520 aa16.62■□□□□ 0.25
ABCF1-206ENST00000479542 GNL3LQ9NVN8 582 aaKnown RBP16.62■□□□□ 0.25
ABCF1-206ENST00000479542 PTCH2Q9Y6C5 1203 aa16.62■□□□□ 0.25
ABCF1-206ENST00000479542 CXCL11O14625 94 aa16.61■□□□□ 0.25
ABCF1-206ENST00000479542 CAPN2P17655 700 aa16.61■□□□□ 0.25
ABCF1-206ENST00000479542 MAP3K10Q02779 954 aa16.61■□□□□ 0.25
ABCF1-206ENST00000479542 TRMT2AQ8IZ69 625 aaKnown RBP16.61■□□□□ 0.25
ABCF1-206ENST00000479542 HOXD10P28358 340 aa16.6■□□□□ 0.25
ABCF1-206ENST00000479542 CDC42EP5Q6NZY7 148 aa16.6■□□□□ 0.25
ABCF1-206ENST00000479542 FAM163AQ96GL9 167 aaPredicted RBP16.6■□□□□ 0.25
ABCF1-206ENST00000479542 IDI2Q9BXS1 227 aa16.6■□□□□ 0.25
ABCF1-206ENST00000479542 CEP126Q9P2H0 1117 aa16.6■□□□□ 0.25
ABCF1-206ENST00000479542 DENND2AQ9ULE3 1009 aa16.6■□□□□ 0.25
ABCF1-206ENST00000479542 DAGLAQ9Y4D2 1042 aa16.6■□□□□ 0.25
ABCF1-206ENST00000479542 PDS5AQ29RF7 1337 aaKnown RBP16.6■□□□□ 0.25
ABCF1-206ENST00000479542 IL15P40933 162 aaPredicted RBP16.59■□□□□ 0.25
ABCF1-206ENST00000479542 ZGPATQ8N5A5 531 aaKnown RBP16.59■□□□□ 0.25
ABCF1-206ENST00000479542 ENTPD3O75355 529 aa16.58■□□□□ 0.24
ABCF1-206ENST00000479542 LDHBP07195 334 aaKnown RBP16.58■□□□□ 0.24
ABCF1-206ENST00000479542 INPP5BP32019 993 aa16.58■□□□□ 0.24
ABCF1-206ENST00000479542 MOGSQ13724 837 aa16.58■□□□□ 0.24
ABCF1-206ENST00000479542 SLC4A8Q2Y0W8 1093 aa16.58■□□□□ 0.24
ABCF1-206ENST00000479542 COPRSQ9NQ92 184 aa16.58■□□□□ 0.24
ABCF1-206ENST00000479542 SRRDQ9UH36 339 aa16.58■□□□□ 0.24
ABCF1-206ENST00000479542 ADGRA2Q96PE1 1338 aa16.58■□□□□ 0.24
ABCF1-206ENST00000479542 UBTFL1P0CB47 393 aaPredicted RBP16.57■□□□□ 0.24
ABCF1-206ENST00000479542 PRDX5P30044 214 aa16.57■□□□□ 0.24
ABCF1-206ENST00000479542 ATP2B3Q16720 1220 aa16.57■□□□□ 0.24
ABCF1-206ENST00000479542 MIGA2Q7L4E1 593 aa16.57■□□□□ 0.24
ABCF1-206ENST00000479542 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.57■□□□□ 0.24
ABCF1-206ENST00000479542 NKX2-3Q8TAU0 364 aa16.57■□□□□ 0.24
ABCF1-206ENST00000479542 FAM198AQ9UFP1 575 aa16.57■□□□□ 0.24
ABCF1-206ENST00000479542 SLC45A1Q9Y2W3 748 aa16.57■□□□□ 0.24
ABCF1-206ENST00000479542 ATRNL1Q5VV63 1379 aa16.56■□□□□ 0.24
ABCF1-206ENST00000479542 GAKO14976 1311 aa16.56■□□□□ 0.24
ABCF1-206ENST00000479542 PDHXO00330 501 aa16.56■□□□□ 0.24
ABCF1-206ENST00000479542 NPM3O75607 178 aaKnown RBP16.56■□□□□ 0.24
ABCF1-206ENST00000479542 FASTKD5Q7L8L6 764 aaKnown RBP16.56■□□□□ 0.24
ABCF1-206ENST00000479542 SLF2Q8IX21 1173 aa16.56■□□□□ 0.24
ABCF1-206ENST00000479542 ARHGAP39Q9C0H5 1083 aa16.56■□□□□ 0.24
ABCF1-206ENST00000479542 PHF20L1A8MW92 1017 aa16.55■□□□□ 0.24
ABCF1-206ENST00000479542 MAP4K4O95819 1239 aaPredicted RBP16.55■□□□□ 0.24
ABCF1-206ENST00000479542 BCRP11274 1271 aa16.55■□□□□ 0.24
ABCF1-206ENST00000479542 NFIAQ12857 509 aa16.55■□□□□ 0.24
ABCF1-206ENST00000479542 DIXDC1Q155Q3 683 aa16.55■□□□□ 0.24
ABCF1-206ENST00000479542 API5Q9BZZ5 524 aaKnown RBP16.55■□□□□ 0.24
ABCF1-206ENST00000479542 SMC4Q9NTJ3 1288 aa16.55■□□□□ 0.24
ABCF1-206ENST00000479542 USP40Q9NVE5 1235 aa16.55■□□□□ 0.24
ABCF1-206ENST00000479542 MYH13Q9UKX3 1938 aa16.55■□□□□ 0.24
ABCF1-206ENST00000479542 PSMC4P43686 418 aa16.54■□□□□ 0.24
ABCF1-206ENST00000479542 TCP10Q12799 353 aa16.54■□□□□ 0.24
ABCF1-206ENST00000479542 GPAT2Q6NUI2 795 aa16.54■□□□□ 0.24
ABCF1-206ENST00000479542 ARHGAP45Q92619 1136 aa16.54■□□□□ 0.24
ABCF1-206ENST00000479542 TRIM47Q96LD4 638 aa16.54■□□□□ 0.24
ABCF1-206ENST00000479542 PARK7Q99497 189 aaKnown RBP16.54■□□□□ 0.24
ABCF1-206ENST00000479542 TBC1D12O60347 775 aa16.53■□□□□ 0.24
ABCF1-206ENST00000479542 GJB1P08034 283 aa16.53■□□□□ 0.24
ABCF1-206ENST00000479542 CTGFP29279 349 aa16.53■□□□□ 0.24
ABCF1-206ENST00000479542 GRK4P32298 578 aa16.53■□□□□ 0.24
ABCF1-206ENST00000479542 MTX1Q13505 466 aa16.53■□□□□ 0.24
ABCF1-206ENST00000479542 SPTY2D1Q68D10 685 aaPredicted RBP16.53■□□□□ 0.24
ABCF1-206ENST00000479542 CCDC102BQ68D86 513 aa16.53■□□□□ 0.24
ABCF1-206ENST00000479542 SCYL3Q8IZE3 742 aa16.53■□□□□ 0.24
ABCF1-206ENST00000479542 SH3TC2Q8TF17 1288 aa16.53■□□□□ 0.24
ABCF1-206ENST00000479542 CPA4Q9UI42 421 aa16.53■□□□□ 0.24
ABCF1-206ENST00000479542 AKAP2Q9Y2D5 859 aa16.53■□□□□ 0.24
ABCF1-206ENST00000479542 RFX7Q2KHR2 1363 aa16.52■□□□□ 0.24
ABCF1-206ENST00000479542 A0A0G2JLL6 359 aaPredicted RBP16.52■□□□□ 0.24
ABCF1-206ENST00000479542 CTNND1O60716 968 aaKnown RBP16.52■□□□□ 0.24
ABCF1-206ENST00000479542 OSBPP22059 807 aa16.52■□□□□ 0.24
ABCF1-206ENST00000479542 PHKA1P46020 1223 aa16.52■□□□□ 0.24
ABCF1-206ENST00000479542 GJA8P48165 433 aa16.52■□□□□ 0.24
ABCF1-206ENST00000479542 PRRT2Q7Z6L0 340 aaPredicted RBP16.52■□□□□ 0.24
ABCF1-206ENST00000479542 UBE2Q1Q7Z7E8 422 aa16.52■□□□□ 0.24
ABCF1-206ENST00000479542 AFG3L2Q9Y4W6 797 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms