RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 PI16Q6UXB8 463 aa21.57■■□□□ 1.04
ECHDC1-216ENST00000479525 ZFPM1Q8IX07 1006 aa21.57■■□□□ 1.04
ECHDC1-216ENST00000479525 WRNIP1Q96S55 665 aa21.57■■□□□ 1.04
ECHDC1-216ENST00000479525 GNL3LQ9NVN8 582 aaKnown RBP21.57■■□□□ 1.04
ECHDC1-216ENST00000479525 ABCF2Q9UG63 623 aa21.57■■□□□ 1.04
ECHDC1-216ENST00000479525 GNAI2P04899 355 aa21.56■■□□□ 1.04
ECHDC1-216ENST00000479525 CAP1Q01518 475 aa21.56■■□□□ 1.04
ECHDC1-216ENST00000479525 DENND2AQ9ULE3 1009 aa21.56■■□□□ 1.04
ECHDC1-216ENST00000479525 SUGT1Q9Y2Z0 365 aa21.56■■□□□ 1.04
ECHDC1-216ENST00000479525 SNCAIPQ9Y6H5 919 aa21.56■■□□□ 1.04
ECHDC1-216ENST00000479525 MLLT1Q03111 559 aaPredicted RBP21.55■■□□□ 1.04
ECHDC1-216ENST00000479525 ZKSCAN2Q63HK3 967 aa21.55■■□□□ 1.04
ECHDC1-216ENST00000479525 BRI3BPQ8WY22 251 aa21.55■■□□□ 1.04
ECHDC1-216ENST00000479525 MS4A4AQ96JQ5 239 aa21.55■■□□□ 1.04
ECHDC1-216ENST00000479525 USP40Q9NVE5 1235 aa21.55■■□□□ 1.04
ECHDC1-216ENST00000479525 HDAC5Q9UQL6 1122 aa21.55■■□□□ 1.04
ECHDC1-216ENST00000479525 CSADQ9Y600 493 aa21.55■■□□□ 1.04
ECHDC1-216ENST00000479525 ECM2O94769 699 aaPredicted RBP21.54■■□□□ 1.04
ECHDC1-216ENST00000479525 RLBP1P12271 317 aa21.54■■□□□ 1.04
ECHDC1-216ENST00000479525 INPP5BP32019 993 aa21.54■■□□□ 1.04
ECHDC1-216ENST00000479525 MTX1Q13505 466 aa21.54■■□□□ 1.04
ECHDC1-216ENST00000479525 CD99L2Q8TCZ2 262 aa21.54■■□□□ 1.04
ECHDC1-216ENST00000479525 FAM198AQ9UFP1 575 aa21.54■■□□□ 1.04
ECHDC1-216ENST00000479525 CCL15-CCL14A0A0B4J2E2 113 aa21.53■■□□□ 1.04
ECHDC1-216ENST00000479525 CCL15Q16663 113 aa21.53■■□□□ 1.04
ECHDC1-216ENST00000479525 FAM83AQ86UY5 434 aa21.53■■□□□ 1.04
ECHDC1-216ENST00000479525 MRIQ9BWK5 157 aa21.53■■□□□ 1.04
ECHDC1-216ENST00000479525 HTTP42858 3142 aa21.52■■□□□ 1.04
ECHDC1-216ENST00000479525 CENPFP49454 3210 aa21.52■■□□□ 1.04
ECHDC1-216ENST00000479525 ALDH1A1P00352 501 aa21.52■■□□□ 1.04
ECHDC1-216ENST00000479525 TBC1D9Q6ZT07 1266 aa21.52■■□□□ 1.04
ECHDC1-216ENST00000479525 TRIM17Q9Y577 477 aa21.52■■□□□ 1.04
ECHDC1-216ENST00000479525 SALL1Q9NSC2 1324 aa21.51■■□□□ 1.03
ECHDC1-216ENST00000479525 RGS19P49795 217 aa21.51■■□□□ 1.03
ECHDC1-216ENST00000479525 INHBEP58166 350 aa21.51■■□□□ 1.03
ECHDC1-216ENST00000479525 DZIP1Q86YF9 867 aaKnown RBP21.51■■□□□ 1.03
ECHDC1-216ENST00000479525 FAM43AQ8N2R8 423 aa21.51■■□□□ 1.03
ECHDC1-216ENST00000479525 FAM151AQ8WW52 585 aa21.51■■□□□ 1.03
ECHDC1-216ENST00000479525 CFHR5Q9BXR6 569 aa21.51■■□□□ 1.03
ECHDC1-216ENST00000479525 G3BP1Q13283 466 aaKnown RBP eCLIP21.5■■□□□ 1.031e-11■■■□□ 15.6
ECHDC1-216ENST00000479525 ITPRIPQ8IWB1 547 aa21.5■■□□□ 1.03
ECHDC1-216ENST00000479525 RPAP1Q9BWH6 1393 aaPredicted RBP21.5■■□□□ 1.03
ECHDC1-216ENST00000479525 TESPA1A2RU30 521 aaPredicted RBP21.49■■□□□ 1.03
ECHDC1-216ENST00000479525 SPDYE5A6NIY4 337 aa21.49■■□□□ 1.03
ECHDC1-216ENST00000479525 UNCXA6NJT0 531 aa21.49■■□□□ 1.03
ECHDC1-216ENST00000479525 IRF6O14896 467 aa21.49■■□□□ 1.03
ECHDC1-216ENST00000479525 RGS3P49796 1198 aa21.49■■□□□ 1.03
ECHDC1-216ENST00000479525 PICALMQ13492 652 aa21.49■■□□□ 1.03
ECHDC1-216ENST00000479525 TAF1CQ15572 869 aaPredicted RBP21.49■■□□□ 1.03
ECHDC1-216ENST00000479525 GORABQ5T7V8 394 aa21.49■■□□□ 1.03
ECHDC1-216ENST00000479525 FTSJ3Q8IY81 847 aaKnown RBP21.49■■□□□ 1.03
ECHDC1-216ENST00000479525 ZNF384Q8TF68 577 aa21.49■■□□□ 1.03
ECHDC1-216ENST00000479525 ZNF341Q9BYN7 854 aa21.49■■□□□ 1.03
ECHDC1-216ENST00000479525 HMG20BQ9P0W2 317 aa21.49■■□□□ 1.03
ECHDC1-216ENST00000479525 AKAP2Q9Y2D5 859 aa21.49■■□□□ 1.03
ECHDC1-216ENST00000479525 SEMA3EO15041 775 aa21.48■■□□□ 1.03
ECHDC1-216ENST00000479525 BTDP43251 543 aa21.48■■□□□ 1.03
ECHDC1-216ENST00000479525 FKBP1CQ5VVH2 108 aa21.48■■□□□ 1.03
ECHDC1-216ENST00000479525 FBXO46Q6PJ61 603 aaPredicted RBP21.48■■□□□ 1.03
ECHDC1-216ENST00000479525 OTOP1Q7RTM1 612 aa21.48■■□□□ 1.03
ECHDC1-216ENST00000479525 DDX4Q9NQI0 724 aaKnown RBP21.48■■□□□ 1.03
ECHDC1-216ENST00000479525 SNRKQ9NRH2 765 aa21.48■■□□□ 1.03
ECHDC1-216ENST00000479525 CDK5RAP2Q96SN8 1893 aa21.48■■□□□ 1.03
ECHDC1-216ENST00000479525 GTF2A2P52657 109 aa21.48■■□□□ 1.03
ECHDC1-216ENST00000479525 MECOMQ03112 1051 aa21.48■■□□□ 1.03
ECHDC1-216ENST00000479525 MVPQ14764 893 aaKnown RBP21.48■■□□□ 1.03
ECHDC1-216ENST00000479525 NOM1Q5C9Z4 860 aaKnown RBP21.48■■□□□ 1.03
ECHDC1-216ENST00000479525 DCAF15Q66K64 600 aa21.48■■□□□ 1.03
ECHDC1-216ENST00000479525 OTUD7BQ6GQQ9 843 aa21.48■■□□□ 1.03
ECHDC1-216ENST00000479525 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.48■■□□□ 1.03
ECHDC1-216ENST00000479525 GAKO14976 1311 aa21.47■■□□□ 1.03
ECHDC1-216ENST00000479525 MCAMP43121 646 aa21.47■■□□□ 1.03
ECHDC1-216ENST00000479525 OS9Q13438 667 aaPredicted RBP21.47■■□□□ 1.03
ECHDC1-216ENST00000479525 SH3BP5LQ7L8J4 393 aa21.47■■□□□ 1.03
ECHDC1-216ENST00000479525 ERO1BQ86YB8 467 aa21.47■■□□□ 1.03
ECHDC1-216ENST00000479525 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.47■■□□□ 1.03
ECHDC1-216ENST00000479525 PANK1Q8TE04 598 aa21.47■■□□□ 1.03
ECHDC1-216ENST00000479525 DOCK1Q14185 1865 aa21.46■■□□□ 1.03
ECHDC1-216ENST00000479525 PHIPQ8WWQ0 1821 aa21.46■■□□□ 1.03
ECHDC1-216ENST00000479525 ATAD5Q96QE3 1844 aa21.46■■□□□ 1.03
ECHDC1-216ENST00000479525 BTBD19C9JJ37 291 aa21.46■■□□□ 1.03
ECHDC1-216ENST00000479525 ERICH6Q7L0X2 663 aa21.46■■□□□ 1.03
ECHDC1-216ENST00000479525 ZSCAN29Q8IWY8 852 aaPredicted RBP21.46■■□□□ 1.03
ECHDC1-216ENST00000479525 ZGPATQ8N5A5 531 aaKnown RBP21.46■■□□□ 1.03
ECHDC1-216ENST00000479525 DBNDD2Q9BQY9 259 aa21.46■■□□□ 1.03
ECHDC1-216ENST00000479525 MAST2Q6P0Q8 1798 aa21.45■■□□□ 1.03
ECHDC1-216ENST00000479525 PTPRFP10586 1907 aa21.45■■□□□ 1.02
ECHDC1-216ENST00000479525 MROH7-TTC4A0A0A0MT08 1334 aa21.45■■□□□ 1.02
ECHDC1-216ENST00000479525 DDTLA6NHG4 134 aaPredicted RBP21.45■■□□□ 1.02
ECHDC1-216ENST00000479525 FAM196BA6NMK8 535 aa21.45■■□□□ 1.02
ECHDC1-216ENST00000479525 POLA2Q14181 598 aa21.45■■□□□ 1.02
ECHDC1-216ENST00000479525 PKN2Q16513 984 aaKnown RBP21.45■■□□□ 1.02
ECHDC1-216ENST00000479525 SPATA5Q8NB90 893 aa21.45■■□□□ 1.02
ECHDC1-216ENST00000479525 RFX7Q2KHR2 1363 aa21.44■■□□□ 1.02
ECHDC1-216ENST00000479525 ZBED9Q6R2W3 1325 aa21.44■■□□□ 1.02
ECHDC1-216ENST00000479525 SURF6O75683 361 aaKnown RBP21.44■■□□□ 1.02
ECHDC1-216ENST00000479525 ATP8B2P98198 1209 aa21.44■■□□□ 1.02
ECHDC1-216ENST00000479525 SP3Q02447 781 aa21.44■■□□□ 1.02
ECHDC1-216ENST00000479525 PPIL2Q13356 520 aa21.44■■□□□ 1.02
ECHDC1-216ENST00000479525 CCDC84Q86UT8 332 aaPredicted RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms