RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 STAT6P42226 847 aa16.33■□□□□ 0.21
COL20A1-206ENST00000479501 GIGYF2Q6Y7W6 1299 aaKnown RBP16.33■□□□□ 0.21
COL20A1-206ENST00000479501 CABP5Q9NP86 173 aa16.33■□□□□ 0.21
COL20A1-206ENST00000479501 IFNKQ9P0W0 207 aa16.33■□□□□ 0.21
COL20A1-206ENST00000479501 MAP3K15Q6ZN16 1313 aa16.33■□□□□ 0.21
COL20A1-206ENST00000479501 MYL10Q9BUA6 226 aa16.33■□□□□ 0.2
COL20A1-206ENST00000479501 PRDM1O75626 825 aa16.33■□□□□ 0.2
COL20A1-206ENST00000479501 MTX1Q13505 466 aa16.33■□□□□ 0.2
COL20A1-206ENST00000479501 ZNF589Q86UQ0 364 aaPredicted RBP16.33■□□□□ 0.2
COL20A1-206ENST00000479501 PHKBQ93100 1093 aa16.33■□□□□ 0.2
COL20A1-206ENST00000479501 CYP27B1O15528 508 aa16.33■□□□□ 0.2
COL20A1-206ENST00000479501 FGAP02671 866 aa16.33■□□□□ 0.2
COL20A1-206ENST00000479501 PLCG2P16885 1265 aa16.33■□□□□ 0.2
COL20A1-206ENST00000479501 MAP9Q49MG5 647 aa16.33■□□□□ 0.2
COL20A1-206ENST00000479501 DIS3L2Q8IYB7 885 aaKnown RBP16.33■□□□□ 0.2
COL20A1-206ENST00000479501 PFKFB2O60825 505 aa16.32■□□□□ 0.2
COL20A1-206ENST00000479501 KIF20AO95235 890 aa16.32■□□□□ 0.2
COL20A1-206ENST00000479501 NAPAP54920 295 aa16.32■□□□□ 0.2
COL20A1-206ENST00000479501 DHX37Q8IY37 1157 aaKnown RBP16.32■□□□□ 0.2
COL20A1-206ENST00000479501 TRIM47Q96LD4 638 aa16.32■□□□□ 0.2
COL20A1-206ENST00000479501 GTPBP4Q9BZE4 634 aaKnown RBP16.32■□□□□ 0.2
COL20A1-206ENST00000479501 ZC3H12CQ9C0D7 883 aaKnown RBP16.32■□□□□ 0.2
COL20A1-206ENST00000479501 IGSF3O75054 1194 aa16.32■□□□□ 0.2
COL20A1-206ENST00000479501 CYP21A2P08686 494 aa16.32■□□□□ 0.2
COL20A1-206ENST00000479501 LMAN1P49257 510 aa16.32■□□□□ 0.2
COL20A1-206ENST00000479501 GNG11P61952 73 aa16.32■□□□□ 0.2
COL20A1-206ENST00000479501 CTDSPL2Q05D32 466 aa16.32■□□□□ 0.2
COL20A1-206ENST00000479501 SPAG1Q07617 926 aa16.32■□□□□ 0.2
COL20A1-206ENST00000479501 KRT40Q6A162 431 aa16.32■□□□□ 0.2
COL20A1-206ENST00000479501 BBXQ8WY36 941 aaPredicted RBP16.32■□□□□ 0.2
COL20A1-206ENST00000479501 CBX8Q9HC52 389 aa16.32■□□□□ 0.2
COL20A1-206ENST00000479501 FSD2A1L4K1 749 aa16.32■□□□□ 0.2
COL20A1-206ENST00000479501 TRAPPC3LQ5T215 181 aa16.32■□□□□ 0.2
COL20A1-206ENST00000479501 CUL5Q93034 780 aa16.32■□□□□ 0.2
COL20A1-206ENST00000479501 RBM28Q9NW13 759 aaKnown RBP16.32■□□□□ 0.2
COL20A1-206ENST00000479501 CCNL1Q9UK58 526 aaPredicted RBP16.32■□□□□ 0.2
COL20A1-206ENST00000479501 CIAO1O76071 339 aa16.31■□□□□ 0.2
COL20A1-206ENST00000479501 IGKV5-2P06315 115 aa16.31■□□□□ 0.2
COL20A1-206ENST00000479501 GREM2Q9H772 168 aa16.31■□□□□ 0.2
COL20A1-206ENST00000479501 CDC42BPGQ6DT37 1551 aa16.31■□□□□ 0.2
COL20A1-206ENST00000479501 PIK3C2BO00750 1634 aa16.31■□□□□ 0.2
COL20A1-206ENST00000479501 TTC6Q86TZ1 520 aa16.31■□□□□ 0.2
COL20A1-206ENST00000479501 CTAGE1Q96RT6 745 aa16.31■□□□□ 0.2
COL20A1-206ENST00000479501 TMX1Q9H3N1 280 aa16.31■□□□□ 0.2
COL20A1-206ENST00000479501 NCAPD2Q15021 1401 aa16.31■□□□□ 0.2
COL20A1-206ENST00000479501 HEG1Q9ULI3 1381 aa16.31■□□□□ 0.2
COL20A1-206ENST00000479501 PDE6AP16499 860 aa16.31■□□□□ 0.2
COL20A1-206ENST00000479501 PICALMQ13492 652 aa16.31■□□□□ 0.2
COL20A1-206ENST00000479501 FAM98CQ17RN3 349 aaKnown RBP16.31■□□□□ 0.2
COL20A1-206ENST00000479501 PPP1R12BO60237 982 aaPredicted RBP16.31■□□□□ 0.2
COL20A1-206ENST00000479501 ZMYM1Q5SVZ6 1142 aa16.31■□□□□ 0.2
COL20A1-206ENST00000479501 IQSEC2Q5JU85 1478 aa16.3■□□□□ 0.2
COL20A1-206ENST00000479501 LIG1P18858 919 aa16.3■□□□□ 0.2
COL20A1-206ENST00000479501 ADORA1P30542 326 aa16.3■□□□□ 0.2
COL20A1-206ENST00000479501 AKNAD1Q5T1N1 836 aa16.3■□□□□ 0.2
COL20A1-206ENST00000479501 TAX1BP1Q86VP1 789 aa16.3■□□□□ 0.2
COL20A1-206ENST00000479501 GIMAP7Q8NHV1 300 aa16.3■□□□□ 0.2
COL20A1-206ENST00000479501 UBA5Q9GZZ9 404 aa16.3■□□□□ 0.2
COL20A1-206ENST00000479501 PDE8BO95263 885 aa16.3■□□□□ 0.2
COL20A1-206ENST00000479501 MYL5Q02045 173 aa16.3■□□□□ 0.2
COL20A1-206ENST00000479501 CNBD1Q8NA66 436 aa16.3■□□□□ 0.2
COL20A1-206ENST00000479501 V9GY48 417 aaPredicted RBP16.3■□□□□ 0.2
COL20A1-206ENST00000479501 ADGRL3Q9HAR2 1447 aa16.3■□□□□ 0.2
COL20A1-206ENST00000479501 MYO3AQ8NEV4 1616 aa16.3■□□□□ 0.2
COL20A1-206ENST00000479501 KCNH3Q9ULD8 1083 aa16.3■□□□□ 0.2
COL20A1-206ENST00000479501 ZBTB1Q9Y2K1 713 aa16.3■□□□□ 0.2
COL20A1-206ENST00000479501 FAM114A1Q8IWE2 563 aa16.29■□□□□ 0.2
COL20A1-206ENST00000479501 IQUBQ8NA54 791 aa16.29■□□□□ 0.2
COL20A1-206ENST00000479501 C6orf50Q9HD87 102 aa16.29■□□□□ 0.2
COL20A1-206ENST00000479501 EXOC1Q9NV70 894 aa16.29■□□□□ 0.2
COL20A1-206ENST00000479501 ZNF202O95125 648 aa16.29■□□□□ 0.2
COL20A1-206ENST00000479501 MCM7P33993 719 aa16.29■□□□□ 0.2
COL20A1-206ENST00000479501 CRB1P82279 1406 aa16.29■□□□□ 0.2
COL20A1-206ENST00000479501 USP28Q96RU2 1077 aa16.29■□□□□ 0.2
COL20A1-206ENST00000479501 ADCY9O60503 1353 aa16.29■□□□□ 0.2
COL20A1-206ENST00000479501 NECTIN1Q15223 517 aa16.29■□□□□ 0.2
COL20A1-206ENST00000479501 MYSM1Q5VVJ2 828 aa16.29■□□□□ 0.2
COL20A1-206ENST00000479501 CPS1P31327 1500 aa16.29■□□□□ 0.2
COL20A1-206ENST00000479501 PSMA7O14818 248 aa16.28■□□□□ 0.2
COL20A1-206ENST00000479501 STX17P56962 302 aa16.28■□□□□ 0.2
COL20A1-206ENST00000479501 CCDC24Q8N4L8 307 aa16.28■□□□□ 0.2
COL20A1-206ENST00000479501 PPP1R9BQ96SB3 815 aa16.28■□□□□ 0.2
COL20A1-206ENST00000479501 ATG3Q9NT62 314 aa16.28■□□□□ 0.2
COL20A1-206ENST00000479501 TFCP2L1Q9NZI6 479 aa16.28■□□□□ 0.2
COL20A1-206ENST00000479501 DNAI1Q9UI46 699 aa16.28■□□□□ 0.2
COL20A1-206ENST00000479501 CLTCQ00610 1675 aaKnown RBP16.28■□□□□ 0.2
COL20A1-206ENST00000479501 EPHA10Q5JZY3 1008 aa16.28■□□□□ 0.2
COL20A1-206ENST00000479501 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.28■□□□□ 0.2
COL20A1-206ENST00000479501 AGLP35573 1532 aa16.28■□□□□ 0.2
COL20A1-206ENST00000479501 USO1O60763 962 aaKnown RBP16.28■□□□□ 0.2
COL20A1-206ENST00000479501 PPP2R5BQ15173 497 aa16.28■□□□□ 0.2
COL20A1-206ENST00000479501 TDRD12Q587J7 1177 aaKnown RBP16.28■□□□□ 0.2
COL20A1-206ENST00000479501 LRRC27Q9C0I9 530 aa16.28■□□□□ 0.2
COL20A1-206ENST00000479501 ZSWIM4Q9H7M6 989 aa16.28■□□□□ 0.2
COL20A1-206ENST00000479501 SEPT11Q9NVA2 429 aaKnown RBP16.28■□□□□ 0.2
COL20A1-206ENST00000479501 SPATA31A3Q5VYP0 1347 aa16.28■□□□□ 0.2
COL20A1-206ENST00000479501 OVOS2A0A0J9YW53 1432 aa16.28■□□□□ 0.2
COL20A1-206ENST00000479501 OVOS2Q6IE36 1432 aa16.28■□□□□ 0.2
COL20A1-206ENST00000479501 CUTAO60888 179 aa16.27■□□□□ 0.2
COL20A1-206ENST00000479501 ADD1P35611 737 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms