RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 DEFB129Q9H1M3 183 aa9.63□□□□□ -0.87
HMGCL-205ENST00000479458 EYSQ5T1H1 3165 aa9.63□□□□□ -0.87
HMGCL-205ENST00000479458 MED23Q9ULK4 1368 aa9.63□□□□□ -0.87
HMGCL-205ENST00000479458 TLR2O60603 784 aa9.62□□□□□ -0.87
HMGCL-205ENST00000479458 COL9A1P20849 921 aa9.62□□□□□ -0.87
HMGCL-205ENST00000479458 IREB2P48200 963 aaKnown RBP9.62□□□□□ -0.87
HMGCL-205ENST00000479458 MTFR1Q15390 333 aa9.62□□□□□ -0.87
HMGCL-205ENST00000479458 TAF1CQ15572 869 aaPredicted RBP9.62□□□□□ -0.87
HMGCL-205ENST00000479458 SUPT20HL1Q3ZLR7 823 aa9.62□□□□□ -0.87
HMGCL-205ENST00000479458 TAF7LQ5H9L4 462 aa9.62□□□□□ -0.87
HMGCL-205ENST00000479458 MTMR14Q8NCE2 650 aa9.62□□□□□ -0.87
HMGCL-205ENST00000479458 CLUAP1Q96AJ1 413 aa9.62□□□□□ -0.87
HMGCL-205ENST00000479458 ANKRD2Q9GZV1 360 aa9.62□□□□□ -0.87
HMGCL-205ENST00000479458 STAP2Q9UGK3 403 aa9.62□□□□□ -0.87
HMGCL-205ENST00000479458 LEMD3Q9Y2U8 911 aa9.62□□□□□ -0.87
HMGCL-205ENST00000479458 NCOR1O75376 2440 aa9.62□□□□□ -0.87
HMGCL-205ENST00000479458 ZNF804BA4D1E1 1349 aa9.61□□□□□ -0.87
HMGCL-205ENST00000479458 RPTORQ8N122 1335 aa9.61□□□□□ -0.87
HMGCL-205ENST00000479458 OTOFQ9HC10 1997 aa9.61□□□□□ -0.87
HMGCL-205ENST00000479458 WDHD1O75717 1129 aaPredicted RBP9.61□□□□□ -0.87
HMGCL-205ENST00000479458 FARP2O94887 1054 aaPredicted RBP9.61□□□□□ -0.87
HMGCL-205ENST00000479458 HOXD10P28358 340 aa9.61□□□□□ -0.87
HMGCL-205ENST00000479458 PLA2G5P39877 138 aa9.61□□□□□ -0.87
HMGCL-205ENST00000479458 PRKG1Q13976 671 aa9.61□□□□□ -0.87
HMGCL-205ENST00000479458 LDHAL6AQ6ZMR3 332 aa9.61□□□□□ -0.87
HMGCL-205ENST00000479458 Q7L0L9 218 aa9.61□□□□□ -0.87
HMGCL-205ENST00000479458 TMEM57Q8N5G2 664 aa9.61□□□□□ -0.87
HMGCL-205ENST00000479458 CNNM1Q9NRU3 951 aa9.61□□□□□ -0.87
HMGCL-205ENST00000479458 LRRFIP2Q9Y608 721 aaKnown RBP9.61□□□□□ -0.87
HMGCL-205ENST00000479458 SNAP23O00161 211 aa9.6□□□□□ -0.87
HMGCL-205ENST00000479458 USP2O75604 605 aaPredicted RBP9.6□□□□□ -0.87
HMGCL-205ENST00000479458 SGPL1O95470 568 aa9.6□□□□□ -0.87
HMGCL-205ENST00000479458 GNAI3P08754 354 aa9.6□□□□□ -0.87
HMGCL-205ENST00000479458 PYGBP11216 843 aa9.6□□□□□ -0.87
HMGCL-205ENST00000479458 RLBP1P12271 317 aa9.6□□□□□ -0.87
HMGCL-205ENST00000479458 KLRK1P26718 216 aa9.6□□□□□ -0.87
HMGCL-205ENST00000479458 GRK4P32298 578 aa9.6□□□□□ -0.87
HMGCL-205ENST00000479458 RFX5P48382 616 aaPredicted RBP9.6□□□□□ -0.87
HMGCL-205ENST00000479458 GTF2A2P52657 109 aa9.6□□□□□ -0.87
HMGCL-205ENST00000479458 EVX2Q03828 476 aa9.6□□□□□ -0.87
HMGCL-205ENST00000479458 TXNRD3Q86VQ6 643 aa9.6□□□□□ -0.87
HMGCL-205ENST00000479458 DZIP1LQ8IYY4 767 aaKnown RBP9.6□□□□□ -0.87
HMGCL-205ENST00000479458 TDHQ8IZJ6 230 aa9.6□□□□□ -0.87
HMGCL-205ENST00000479458 U2AF1L4Q8WU68 220 aaKnown RBP9.6□□□□□ -0.87
HMGCL-205ENST00000479458 BRI3BPQ8WY22 251 aa9.6□□□□□ -0.87
HMGCL-205ENST00000479458 SYMPKQ92797 1274 aaKnown RBP9.6□□□□□ -0.87
HMGCL-205ENST00000479458 PUS3Q9BZE2 481 aaKnown RBP9.6□□□□□ -0.87
HMGCL-205ENST00000479458 SRRDQ9UH36 339 aa9.6□□□□□ -0.87
HMGCL-205ENST00000479458 HDAC5Q9UQL6 1122 aa9.6□□□□□ -0.87
HMGCL-205ENST00000479458 RIPOR2Q9Y4F9 1068 aa9.6□□□□□ -0.87
HMGCL-205ENST00000479458 ZSWIM8A7E2V4 1837 aa9.6□□□□□ -0.87
HMGCL-205ENST00000479458 IRS2Q9Y4H2 1338 aa9.59□□□□□ -0.87
HMGCL-205ENST00000479458 POTEB2H3BUK9 544 aa9.59□□□□□ -0.87
HMGCL-205ENST00000479458 TAF5LO75529 589 aa9.59□□□□□ -0.87
HMGCL-205ENST00000479458 SASH1O94885 1247 aa9.59□□□□□ -0.87
HMGCL-205ENST00000479458 MYCP01106 439 aaPredicted RBP9.59□□□□□ -0.87
HMGCL-205ENST00000479458 CCL5P13501 91 aa9.59□□□□□ -0.87
HMGCL-205ENST00000479458 KCNJ4P48050 445 aa9.59□□□□□ -0.87
HMGCL-205ENST00000479458 BCAMP50895 628 aa9.59□□□□□ -0.87
HMGCL-205ENST00000479458 UBXN2AP68543 259 aa9.59□□□□□ -0.87
HMGCL-205ENST00000479458 LRRC24Q50LG9 513 aa9.59□□□□□ -0.87
HMGCL-205ENST00000479458 C15orf52Q6ZUT6 534 aaKnown RBP9.59□□□□□ -0.87
HMGCL-205ENST00000479458 FTSJ3Q8IY81 847 aaKnown RBP9.59□□□□□ -0.87
HMGCL-205ENST00000479458 ZNF579Q8NAF0 562 aaKnown RBP9.59□□□□□ -0.87
HMGCL-205ENST00000479458 KLHDC4Q8TBB5 520 aa9.59□□□□□ -0.87
HMGCL-205ENST00000479458 TRIM47Q96LD4 638 aa9.59□□□□□ -0.87
HMGCL-205ENST00000479458 RNF208Q9H0X6 261 aa9.59□□□□□ -0.87
HMGCL-205ENST00000479458 RCAN3Q9UKA8 241 aa9.59□□□□□ -0.87
HMGCL-205ENST00000479458 LAMA2P24043 3122 aaKnown RBP9.59□□□□□ -0.87
HMGCL-205ENST00000479458 COL2A1P02458 1487 aaPredicted RBP9.59□□□□□ -0.87
HMGCL-205ENST00000479458 FAM205AQ6ZU69 1335 aa9.58□□□□□ -0.88
HMGCL-205ENST00000479458 MTX1Q13505 466 aa9.58□□□□□ -0.88
HMGCL-205ENST00000479458 FAM43AQ8N2R8 423 aa9.58□□□□□ -0.88
HMGCL-205ENST00000479458 OPTNQ96CV9 577 aa9.58□□□□□ -0.88
HMGCL-205ENST00000479458 ARHGAP39Q9C0H5 1083 aa9.58□□□□□ -0.88
HMGCL-205ENST00000479458 COA1Q9GZY4 146 aa9.58□□□□□ -0.88
HMGCL-205ENST00000479458 MROH5Q6ZUA9 1318 aa9.57□□□□□ -0.88
HMGCL-205ENST00000479458 CCL15-CCL14A0A0B4J2E2 113 aa9.57□□□□□ -0.88
HMGCL-205ENST00000479458 EYA2O00167 538 aa9.57□□□□□ -0.88
HMGCL-205ENST00000479458 PLIN1O60240 522 aa9.57□□□□□ -0.88
HMGCL-205ENST00000479458 GNAI2P04899 355 aa9.57□□□□□ -0.88
HMGCL-205ENST00000479458 UBE4AQ14139 1066 aa9.57□□□□□ -0.88
HMGCL-205ENST00000479458 CCL15Q16663 113 aa9.57□□□□□ -0.88
HMGCL-205ENST00000479458 C17orf99Q6UX52 265 aa9.57□□□□□ -0.88
HMGCL-205ENST00000479458 ITPRIPQ8IWB1 547 aa9.57□□□□□ -0.88
HMGCL-205ENST00000479458 VGLL2Q8N8G2 317 aa9.57□□□□□ -0.88
HMGCL-205ENST00000479458 CRISPLD2Q9H0B8 497 aa9.57□□□□□ -0.88
HMGCL-205ENST00000479458 FZD1Q9UP38 647 aa9.57□□□□□ -0.88
HMGCL-205ENST00000479458 MGAMO43451 1857 aa9.56□□□□□ -0.88
HMGCL-205ENST00000479458 METTL24Q5JXM2 366 aa9.56□□□□□ -0.88
HMGCL-205ENST00000479458 ATG9AQ7Z3C6 839 aa9.56□□□□□ -0.88
HMGCL-205ENST00000479458 ANKLE1Q8NAG6 615 aa9.56□□□□□ -0.88
HMGCL-205ENST00000479458 SLAIN1Q8ND83 568 aa9.56□□□□□ -0.88
HMGCL-205ENST00000479458 RAET1EQ8TD07 263 aa9.56□□□□□ -0.88
HMGCL-205ENST00000479458 PANK1Q8TE04 598 aa9.56□□□□□ -0.88
HMGCL-205ENST00000479458 RNF25Q96BH1 459 aaPredicted RBP9.56□□□□□ -0.88
HMGCL-205ENST00000479458 KIF12Q96FN5 646 aa9.56□□□□□ -0.88
HMGCL-205ENST00000479458 GUCD1Q96NT3 240 aa9.56□□□□□ -0.88
HMGCL-205ENST00000479458 CD209Q9NNX6 404 aa9.56□□□□□ -0.88
HMGCL-205ENST00000479458 COPRSQ9NQ92 184 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms