RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 KIF1BPQ96EK5 621 aa25.41■■□□□ 1.66
PKP4-209ENST00000479398 TMEM39BQ9GZU3 492 aa25.41■■□□□ 1.66
PKP4-209ENST00000479398 IL1RAPL2Q9NP60 686 aa25.41■■□□□ 1.66
PKP4-209ENST00000479398 SNRKQ9NRH2 765 aa25.41■■□□□ 1.66
PKP4-209ENST00000479398 TLR7Q9NYK1 1049 aaKnown RBP25.41■■□□□ 1.66
PKP4-209ENST00000479398 THSD7BQ9C0I4 1608 aa25.41■■□□□ 1.66
PKP4-209ENST00000479398 APBB1O00213 710 aa25.4■■□□□ 1.66
PKP4-209ENST00000479398 USP2O75604 605 aaPredicted RBP25.4■■□□□ 1.66
PKP4-209ENST00000479398 MECOMQ03112 1051 aa25.4■■□□□ 1.66
PKP4-209ENST00000479398 AACSQ86V21 672 aa25.4■■□□□ 1.66
PKP4-209ENST00000479398 RASAL3Q86YV0 1011 aa25.4■■□□□ 1.66
PKP4-209ENST00000479398 USP40Q9NVE5 1235 aa25.4■■□□□ 1.66
PKP4-209ENST00000479398 AKAP11Q9UKA4 1901 aa25.39■■□□□ 1.66
PKP4-209ENST00000479398 KIF23Q02241 960 aaPredicted RBP25.39■■□□□ 1.66
PKP4-209ENST00000479398 BEGAINQ9BUH8 593 aa25.39■■□□□ 1.66
PKP4-209ENST00000479398 SSC5DA1L4H1 1573 aa25.39■■□□□ 1.65
PKP4-209ENST00000479398 GAKO14976 1311 aa25.38■■□□□ 1.65
PKP4-209ENST00000479398 CDAN1Q8IWY9 1227 aa25.38■■□□□ 1.65
PKP4-209ENST00000479398 CLASRPQ8N2M8 674 aaKnown RBP25.38■■□□□ 1.65
PKP4-209ENST00000479398 LRP2BPQ9P2M1 347 aa25.38■■□□□ 1.65
PKP4-209ENST00000479398 UNCXA6NJT0 531 aa25.37■■□□□ 1.65
PKP4-209ENST00000479398 LDHCP07864 332 aa25.37■■□□□ 1.65
PKP4-209ENST00000479398 CTCFP49711 727 aaPredicted RBP25.37■■□□□ 1.65
PKP4-209ENST00000479398 ZNF384Q8TF68 577 aa25.37■■□□□ 1.65
PKP4-209ENST00000479398 NSUN4Q96CB9 384 aaKnown RBP25.37■■□□□ 1.65
PKP4-209ENST00000479398 RAI14Q9P0K7 980 aa25.37■■□□□ 1.65
PKP4-209ENST00000479398 CYP2E1P05181 493 aaPredicted RBP25.36■■□□□ 1.65
PKP4-209ENST00000479398 IREB2P48200 963 aaKnown RBP25.36■■□□□ 1.65
PKP4-209ENST00000479398 GSTO1P78417 241 aa25.36■■□□□ 1.65
PKP4-209ENST00000479398 FAM151AQ8WW52 585 aa25.36■■□□□ 1.65
PKP4-209ENST00000479398 SLC10A4Q96EP9 437 aa25.36■■□□□ 1.65
PKP4-209ENST00000479398 GPR75-ASB3A0A0A6YYF3 556 aa25.35■■□□□ 1.65
PKP4-209ENST00000479398 ZAP70P43403 619 aa25.35■■□□□ 1.65
PKP4-209ENST00000479398 CSRNP1Q96S65 589 aa25.35■■□□□ 1.65
PKP4-209ENST00000479398 MROH7-TTC4A0A0A0MT08 1334 aa25.35■■□□□ 1.65
PKP4-209ENST00000479398 NFIAQ12857 509 aa25.34■■□□□ 1.65
PKP4-209ENST00000479398 REM2Q8IYK8 340 aaPredicted RBP25.34■■□□□ 1.65
PKP4-209ENST00000479398 FAM198AQ9UFP1 575 aa25.34■■□□□ 1.65
PKP4-209ENST00000479398 BTDP43251 543 aa25.33■■□□□ 1.65
PKP4-209ENST00000479398 TCP10Q12799 353 aa25.33■■□□□ 1.65
PKP4-209ENST00000479398 ANKRD13AQ8IZ07 590 aa25.33■■□□□ 1.65
PKP4-209ENST00000479398 HOOK2Q96ED9 719 aa25.33■■□□□ 1.65
PKP4-209ENST00000479398 IDI2Q9BXS1 227 aa25.33■■□□□ 1.65
PKP4-209ENST00000479398 CA12O43570 354 aa25.32■■□□□ 1.64
PKP4-209ENST00000479398 IGSF3O75054 1194 aa25.32■■□□□ 1.64
PKP4-209ENST00000479398 IFIT2P09913 472 aaKnown RBP25.32■■□□□ 1.64
PKP4-209ENST00000479398 HSPA8P11142 646 aaKnown RBP25.32■■□□□ 1.64
PKP4-209ENST00000479398 COL13A1Q5TAT6 717 aaPredicted RBP25.32■■□□□ 1.64
PKP4-209ENST00000479398 CLMNQ96JQ2 1002 aa25.32■■□□□ 1.64
PKP4-209ENST00000479398 BCL11AQ9H165 835 aa25.32■■□□□ 1.64
PKP4-209ENST00000479398 DCTPP1Q9H773 170 aa25.32■■□□□ 1.64
PKP4-209ENST00000479398 AK9Q5TCS8 1911 aa25.31■■□□□ 1.64
PKP4-209ENST00000479398 LBX1P52954 281 aa25.31■■□□□ 1.64
PKP4-209ENST00000479398 CRBNQ96SW2 442 aa25.31■■□□□ 1.64
PKP4-209ENST00000479398 PIH1D3Q9NQM4 214 aaKnown RBP25.31■■□□□ 1.64
PKP4-209ENST00000479398 PRDM10Q9NQV6 1147 aa25.31■■□□□ 1.64
PKP4-209ENST00000479398 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.31■■□□□ 1.64
PKP4-209ENST00000479398 PCDHB15Q9Y5E8 787 aa25.31■■□□□ 1.64
PKP4-209ENST00000479398 ENTPD3O75355 529 aa25.3■■□□□ 1.64
PKP4-209ENST00000479398 MAP3K9P80192 1104 aa25.3■■□□□ 1.64
PKP4-209ENST00000479398 SPRYD7Q5W111 196 aa25.3■■□□□ 1.64
PKP4-209ENST00000479398 NAA16Q6N069 864 aaPredicted RBP25.3■■□□□ 1.64
PKP4-209ENST00000479398 ZFPM1Q8IX07 1006 aa25.3■■□□□ 1.64
PKP4-209ENST00000479398 LRRCC1Q9C099 1032 aa25.3■■□□□ 1.64
PKP4-209ENST00000479398 RPAP1Q9BWH6 1393 aaPredicted RBP25.3■■□□□ 1.64
PKP4-209ENST00000479398 MYO5AQ9Y4I1 1855 aaKnown RBP25.3■■□□□ 1.64
PKP4-209ENST00000479398 MAP4K4O95819 1239 aaPredicted RBP25.29■■□□□ 1.64
PKP4-209ENST00000479398 RGS3P49796 1198 aa25.29■■□□□ 1.64
PKP4-209ENST00000479398 RHBDL3P58872 404 aa25.29■■□□□ 1.64
PKP4-209ENST00000479398 MKRN3Q13064 507 aaKnown RBP25.29■■□□□ 1.64
PKP4-209ENST00000479398 WDHD1O75717 1129 aaPredicted RBP25.28■■□□□ 1.64
PKP4-209ENST00000479398 TM4SF4P48230 202 aa25.28■■□□□ 1.64
PKP4-209ENST00000479398 DCAF15Q66K64 600 aa25.28■■□□□ 1.64
PKP4-209ENST00000479398 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.28■■□□□ 1.64
PKP4-209ENST00000479398 MIGA2Q7L4E1 593 aa25.28■■□□□ 1.64
PKP4-209ENST00000479398 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.28■■□□□ 1.64
PKP4-209ENST00000479398 NDUFB9Q9Y6M9 179 aa25.28■■□□□ 1.64
PKP4-209ENST00000479398 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.27■■□□□ 1.64
PKP4-209ENST00000479398 WNK4Q96J92 1243 aa25.27■■□□□ 1.64
PKP4-209ENST00000479398 ANTXR1Q9H6X2 564 aa25.27■■□□□ 1.64
PKP4-209ENST00000479398 RNF186Q9NXI6 227 aa25.27■■□□□ 1.64
PKP4-209ENST00000479398 TSKSQ9UJT2 592 aa25.27■■□□□ 1.64
PKP4-209ENST00000479398 SMARCA5O60264 1052 aaPredicted RBP25.26■■□□□ 1.63
PKP4-209ENST00000479398 ZBTB48P10074 688 aaPredicted RBP25.26■■□□□ 1.63
PKP4-209ENST00000479398 PPP4CP60510 307 aa25.26■■□□□ 1.63
PKP4-209ENST00000479398 NOL10Q9BSC4 688 aaKnown RBP25.26■■□□□ 1.63
PKP4-209ENST00000479398 DDX4Q9NQI0 724 aaKnown RBP25.26■■□□□ 1.63
PKP4-209ENST00000479398 NPM3O75607 178 aaKnown RBP25.25■■□□□ 1.63
PKP4-209ENST00000479398 IDH1O75874 414 aaKnown RBP25.25■■□□□ 1.63
PKP4-209ENST00000479398 BAG3O95817 575 aa25.25■■□□□ 1.63
PKP4-209ENST00000479398 ZNF341Q9BYN7 854 aa25.25■■□□□ 1.63
PKP4-209ENST00000479398 ELP3Q9H9T3 547 aa25.25■■□□□ 1.63
PKP4-209ENST00000479398 SAGE1Q9NXZ1 904 aa25.25■■□□□ 1.63
PKP4-209ENST00000479398 TRPA1O75762 1119 aa25.24■■□□□ 1.63
PKP4-209ENST00000479398 PICALMQ13492 652 aa25.24■■□□□ 1.63
PKP4-209ENST00000479398 VGLL4Q14135 290 aa25.24■■□□□ 1.63
PKP4-209ENST00000479398 SH3BP5LQ7L8J4 393 aa25.24■■□□□ 1.63
PKP4-209ENST00000479398 ZSCAN29Q8IWY8 852 aaPredicted RBP25.24■■□□□ 1.63
PKP4-209ENST00000479398 CSADQ9Y600 493 aa25.24■■□□□ 1.63
PKP4-209ENST00000479398 RFX7Q2KHR2 1363 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms