RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 PLCD3Q8N3E9 789 aa8.39□□□□□ -1.07
VCP-205ENST00000479300 ZKSCAN4Q969J2 545 aaPredicted RBP8.39□□□□□ -1.07
VCP-205ENST00000479300 KAZALD1Q96I82 304 aa8.39□□□□□ -1.07
VCP-205ENST00000479300 CACNB1Q02641 598 aaPredicted RBP8.38□□□□□ -1.07
VCP-205ENST00000479300 TNFAIP1Q13829 316 aa8.38□□□□□ -1.07
VCP-205ENST00000479300 LDHAL6AQ6ZMR3 332 aa8.38□□□□□ -1.07
VCP-205ENST00000479300 ERO1BQ86YB8 467 aa8.38□□□□□ -1.07
VCP-205ENST00000479300 SRRDQ9UH36 339 aa8.38□□□□□ -1.07
VCP-205ENST00000479300 CPA4Q9UI42 421 aa8.38□□□□□ -1.07
VCP-205ENST00000479300 IQSEC3Q9UPP2 1182 aaPredicted RBP8.38□□□□□ -1.07
VCP-205ENST00000479300 CHMP3Q9Y3E7 222 aa8.38□□□□□ -1.07
VCP-205ENST00000479300 CSADQ9Y600 493 aa8.38□□□□□ -1.07
VCP-205ENST00000479300 VAMP4O75379 141 aa8.37□□□□□ -1.07
VCP-205ENST00000479300 CETPP11597 493 aa8.37□□□□□ -1.07
VCP-205ENST00000479300 OSBPP22059 807 aa8.37□□□□□ -1.07
VCP-205ENST00000479300 HIBADHP31937 336 aaKnown RBP8.37□□□□□ -1.07
VCP-205ENST00000479300 INPP5BP32019 993 aa8.37□□□□□ -1.07
VCP-205ENST00000479300 PPIL2Q13356 520 aa8.37□□□□□ -1.07
VCP-205ENST00000479300 APOBEC3HQ6NTF7 200 aaKnown RBP8.37□□□□□ -1.07
VCP-205ENST00000479300 FBXO33Q7Z6M2 555 aa8.37□□□□□ -1.07
VCP-205ENST00000479300 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.37□□□□□ -1.07
VCP-205ENST00000479300 WRNIP1Q96S55 665 aa8.37□□□□□ -1.07
VCP-205ENST00000479300 ZCCHC17Q9NP64 241 aaKnown RBP8.37□□□□□ -1.07
VCP-205ENST00000479300 ALPK3Q96L96 1907 aa8.37□□□□□ -1.07
VCP-205ENST00000479300 DLL1O00548 723 aa8.36□□□□□ -1.07
VCP-205ENST00000479300 ZBTB7BO15156 539 aaPredicted RBP8.36□□□□□ -1.07
VCP-205ENST00000479300 GJB1P08034 283 aa8.36□□□□□ -1.07
VCP-205ENST00000479300 CCL5P13501 91 aa8.36□□□□□ -1.07
VCP-205ENST00000479300 GRK4P32298 578 aa8.36□□□□□ -1.07
VCP-205ENST00000479300 PSMC4P43686 418 aa8.36□□□□□ -1.07
VCP-205ENST00000479300 GJA8P48165 433 aa8.36□□□□□ -1.07
VCP-205ENST00000479300 SNAPC2Q13487 334 aa8.36□□□□□ -1.07
VCP-205ENST00000479300 UBE4AQ14139 1066 aa8.36□□□□□ -1.07
VCP-205ENST00000479300 ARHGEF6Q15052 776 aa8.36□□□□□ -1.07
VCP-205ENST00000479300 TAF7LQ5H9L4 462 aa8.36□□□□□ -1.07
VCP-205ENST00000479300 DPF3Q92784 378 aa8.36□□□□□ -1.07
VCP-205ENST00000479300 LRCH3Q96II8 777 aa8.36□□□□□ -1.07
VCP-205ENST00000479300 CNNM1Q9NRU3 951 aa8.36□□□□□ -1.07
VCP-205ENST00000479300 C9orf78Q9NZ63 289 aaPredicted RBP8.36□□□□□ -1.07
VCP-205ENST00000479300 RIPOR2Q9Y4F9 1068 aa8.36□□□□□ -1.07
VCP-205ENST00000479300 MGAMO43451 1857 aa8.35□□□□□ -1.07
VCP-205ENST00000479300 GRM8O00222 908 aa8.35□□□□□ -1.07
VCP-205ENST00000479300 PDHXO00330 501 aa8.35□□□□□ -1.07
VCP-205ENST00000479300 GNRH1P01148 92 aa8.35□□□□□ -1.07
VCP-205ENST00000479300 BCRP11274 1271 aa8.35□□□□□ -1.07
VCP-205ENST00000479300 PRMT2P55345 433 aa8.35□□□□□ -1.07
VCP-205ENST00000479300 HDLBPQ00341 1268 aaKnown RBP8.35□□□□□ -1.07
VCP-205ENST00000479300 PRKCZQ05513 592 aa8.35□□□□□ -1.07
VCP-205ENST00000479300 CHAF1AQ13111 956 aaPredicted RBP8.35□□□□□ -1.07
VCP-205ENST00000479300 CCDC57Q2TAC2 916 aa8.35□□□□□ -1.07
VCP-205ENST00000479300 LRRC24Q50LG9 513 aa8.35□□□□□ -1.07
VCP-205ENST00000479300 GPAT2Q6NUI2 795 aa8.35□□□□□ -1.07
VCP-205ENST00000479300 SLC4A10Q6U841 1118 aa8.35□□□□□ -1.07
VCP-205ENST00000479300 MIGA2Q7L4E1 593 aa8.35□□□□□ -1.07
VCP-205ENST00000479300 ANKRD23Q86SG2 305 aa8.35□□□□□ -1.07
VCP-205ENST00000479300 VGLL2Q8N8G2 317 aa8.35□□□□□ -1.07
VCP-205ENST00000479300 SUCLG2Q96I99 432 aa8.35□□□□□ -1.07
VCP-205ENST00000479300 ZDHHC15Q96MV8 337 aa8.35□□□□□ -1.07
VCP-205ENST00000479300 UNC93B1Q9H1C4 597 aa8.35□□□□□ -1.07
VCP-205ENST00000479300 GABRQQ9UN88 632 aa8.35□□□□□ -1.07
VCP-205ENST00000479300 KCNH4Q9UQ05 1017 aa8.35□□□□□ -1.07
VCP-205ENST00000479300 RPAP1Q9BWH6 1393 aaPredicted RBP8.35□□□□□ -1.07
VCP-205ENST00000479300 MYPNQ86TC9 1320 aa8.34□□□□□ -1.07
VCP-205ENST00000479300 TNNI2P48788 182 aa8.34□□□□□ -1.07
VCP-205ENST00000479300 BCAMP50895 628 aa8.34□□□□□ -1.07
VCP-205ENST00000479300 PPATQ06203 517 aa8.34□□□□□ -1.07
VCP-205ENST00000479300 KIF22Q14807 665 aa8.34□□□□□ -1.07
VCP-205ENST00000479300 FKBP1CQ5VVH2 108 aa8.34□□□□□ -1.07
VCP-205ENST00000479300 FAM83AQ86UY5 434 aa8.34□□□□□ -1.07
VCP-205ENST00000479300 SLC17A8Q8NDX2 589 aa8.34□□□□□ -1.07
VCP-205ENST00000479300 U2AF1L4Q8WU68 220 aaKnown RBP8.34□□□□□ -1.07
VCP-205ENST00000479300 TEKT1Q969V4 418 aa8.34□□□□□ -1.07
VCP-205ENST00000479300 SRCIN1Q9C0H9 1055 aa8.34□□□□□ -1.07
VCP-205ENST00000479300 RNF208Q9H0X6 261 aa8.34□□□□□ -1.07
VCP-205ENST00000479300 ZNF112Q9UJU3 913 aa8.34□□□□□ -1.07
VCP-205ENST00000479300 ATRNL1Q5VV63 1379 aa8.34□□□□□ -1.07
VCP-205ENST00000479300 E9PSI1 815 aa8.33□□□□□ -1.08
VCP-205ENST00000479300 ALDH1L1O75891 902 aa8.33□□□□□ -1.08
VCP-205ENST00000479300 FARP2O94887 1054 aaPredicted RBP8.33□□□□□ -1.08
VCP-205ENST00000479300 FMNL1O95466 1100 aaPredicted RBP8.33□□□□□ -1.08
VCP-205ENST00000479300 NEFLP07196 543 aa8.33□□□□□ -1.08
VCP-205ENST00000479300 NBPF7P0C2Y1 421 aaPredicted RBP8.33□□□□□ -1.08
VCP-205ENST00000479300 SLURP2P0DP57 97 aa8.33□□□□□ -1.08
VCP-205ENST00000479300 CYP2C8P10632 490 aa8.33□□□□□ -1.08
VCP-205ENST00000479300 ELNP15502 786 aa8.33□□□□□ -1.08
VCP-205ENST00000479300 NFIAQ12857 509 aa8.33□□□□□ -1.08
VCP-205ENST00000479300 ZFPM1Q8IX07 1006 aa8.33□□□□□ -1.08
VCP-205ENST00000479300 ANKRD44Q8N8A2 993 aa8.33□□□□□ -1.08
VCP-205ENST00000479300 RAET1EQ8TD07 263 aa8.33□□□□□ -1.08
VCP-205ENST00000479300 SGPL1O95470 568 aa8.32□□□□□ -1.08
VCP-205ENST00000479300 FGFR2P21802 821 aa8.32□□□□□ -1.08
VCP-205ENST00000479300 RABL6Q3YEC7 729 aaPredicted RBP8.32□□□□□ -1.08
VCP-205ENST00000479300 NOL9Q5SY16 702 aaKnown RBP8.32□□□□□ -1.08
VCP-205ENST00000479300 NKX2-3Q8TAU0 364 aa8.32□□□□□ -1.08
VCP-205ENST00000479300 KLHDC4Q8TBB5 520 aa8.32□□□□□ -1.08
VCP-205ENST00000479300 DIS3LQ8TF46 1054 aaKnown RBP8.32□□□□□ -1.08
VCP-205ENST00000479300 MRIQ9BWK5 157 aa8.32□□□□□ -1.08
VCP-205ENST00000479300 ZNF341Q9BYN7 854 aa8.32□□□□□ -1.08
VCP-205ENST00000479300 BICC1Q9H694 974 aaKnown RBP8.32□□□□□ -1.08
VCP-205ENST00000479300 FAM198AQ9UFP1 575 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms