RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 IDI2Q9BXS1 227 aa18.87■□□□□ 0.61
C9orf3-217ENST00000479161 RWDD1Q9H446 243 aaPredicted RBP18.87■□□□□ 0.61
C9orf3-217ENST00000479161 VEZTQ9HBM0 779 aa18.87■□□□□ 0.61
C9orf3-217ENST00000479161 PPP4CP60510 307 aa18.86■□□□□ 0.61
C9orf3-217ENST00000479161 DLK2Q6UY11 383 aa18.86■□□□□ 0.61
C9orf3-217ENST00000479161 TBC1D9Q6ZT07 1266 aa18.86■□□□□ 0.61
C9orf3-217ENST00000479161 EXOC6Q8TAG9 804 aa18.86■□□□□ 0.61
C9orf3-217ENST00000479161 TEPSINQ96N21 525 aa18.86■□□□□ 0.61
C9orf3-217ENST00000479161 ZNF408Q9H9D4 720 aa18.86■□□□□ 0.61
C9orf3-217ENST00000479161 SNRKQ9NRH2 765 aa18.86■□□□□ 0.61
C9orf3-217ENST00000479161 PPP1R12BO60237 982 aaPredicted RBP18.85■□□□□ 0.61
C9orf3-217ENST00000479161 HUNKP57058 714 aa18.85■□□□□ 0.61
C9orf3-217ENST00000479161 SMC5Q8IY18 1101 aa18.85■□□□□ 0.61
C9orf3-217ENST00000479161 FAM151AQ8WW52 585 aa18.85■□□□□ 0.61
C9orf3-217ENST00000479161 CCDC102AQ96A19 550 aa18.85■□□□□ 0.61
C9orf3-217ENST00000479161 RAI14Q9P0K7 980 aa18.85■□□□□ 0.61
C9orf3-217ENST00000479161 RFX7Q2KHR2 1363 aa18.84■□□□□ 0.61
C9orf3-217ENST00000479161 ENTPD3O75355 529 aa18.84■□□□□ 0.61
C9orf3-217ENST00000479161 MAP2K2P36507 400 aa18.84■□□□□ 0.61
C9orf3-217ENST00000479161 VEGFBP49765 207 aa18.84■□□□□ 0.61
C9orf3-217ENST00000479161 MAP3K12Q12852 859 aa18.84■□□□□ 0.61
C9orf3-217ENST00000479161 LDLRAD1Q5T700 205 aa18.84■□□□□ 0.61
C9orf3-217ENST00000479161 NAA16Q6N069 864 aaPredicted RBP18.84■□□□□ 0.61
C9orf3-217ENST00000479161 ARMC9Q7Z3E5 817 aa18.84■□□□□ 0.61
C9orf3-217ENST00000479161 GPATCH3Q96I76 525 aa18.84■□□□□ 0.61
C9orf3-217ENST00000479161 HAUS7Q99871 368 aa18.84■□□□□ 0.61
C9orf3-217ENST00000479161 ECHDC1Q9NTX5 307 aa18.84■□□□□ 0.61
C9orf3-217ENST00000479161 USP40Q9NVE5 1235 aa18.84■□□□□ 0.61
C9orf3-217ENST00000479161 MKRN1Q9UHC7 482 aaKnown RBP18.84■□□□□ 0.61
C9orf3-217ENST00000479161 THSD7BQ9C0I4 1608 aa18.84■□□□□ 0.61
C9orf3-217ENST00000479161 TTC41PQ6P2S7 1318 aa18.83■□□□□ 0.61
C9orf3-217ENST00000479161 WDR33Q9C0J8 1336 aaKnown RBP18.83■□□□□ 0.61
C9orf3-217ENST00000479161 BAG3O95817 575 aa18.83■□□□□ 0.6
C9orf3-217ENST00000479161 PLCG2P16885 1265 aa18.83■□□□□ 0.6
C9orf3-217ENST00000479161 RHBDL3P58872 404 aa18.83■□□□□ 0.6
C9orf3-217ENST00000479161 RGMBQ6NW40 437 aa18.83■□□□□ 0.6
C9orf3-217ENST00000479161 PIH1D3Q9NQM4 214 aaKnown RBP18.83■□□□□ 0.6
C9orf3-217ENST00000479161 SCAF8Q9UPN6 1271 aaKnown RBP18.83■□□□□ 0.6
C9orf3-217ENST00000479161 TCP10L2B9ZVM9 353 aa18.82■□□□□ 0.6
C9orf3-217ENST00000479161 SMARCA5O60264 1052 aaPredicted RBP18.82■□□□□ 0.6
C9orf3-217ENST00000479161 BTDP43251 543 aa18.82■□□□□ 0.6
C9orf3-217ENST00000479161 NBPF12Q5TAG4 269 aaPredicted RBP18.82■□□□□ 0.6
C9orf3-217ENST00000479161 PRAMEF18Q5VWM3 479 aa18.82■□□□□ 0.6
C9orf3-217ENST00000479161 CAPNS2Q96L46 248 aa18.82■□□□□ 0.6
C9orf3-217ENST00000479161 COL2A1P02458 1487 aaPredicted RBP18.82■□□□□ 0.6
C9orf3-217ENST00000479161 SSC5DA1L4H1 1573 aa18.81■□□□□ 0.6
C9orf3-217ENST00000479161 NOGQ13253 232 aa18.81■□□□□ 0.6
C9orf3-217ENST00000479161 REM2Q8IYK8 340 aaPredicted RBP18.81■□□□□ 0.6
C9orf3-217ENST00000479161 TMEM39BQ9GZU3 492 aa18.81■□□□□ 0.6
C9orf3-217ENST00000479161 FAM198AQ9UFP1 575 aa18.81■□□□□ 0.6
C9orf3-217ENST00000479161 AK9Q5TCS8 1911 aa18.8■□□□□ 0.6
C9orf3-217ENST00000479161 WDHD1O75717 1129 aaPredicted RBP18.8■□□□□ 0.6
C9orf3-217ENST00000479161 NOL10Q9BSC4 688 aaKnown RBP18.8■□□□□ 0.6
C9orf3-217ENST00000479161 ANTXR1Q9H6X2 564 aa18.8■□□□□ 0.6
C9orf3-217ENST00000479161 PAG1Q9NWQ8 432 aa18.8■□□□□ 0.6
C9orf3-217ENST00000479161 ZBTB47Q9UFB7 747 aaPredicted RBP18.8■□□□□ 0.6
C9orf3-217ENST00000479161 MYH7P12883 1935 aa18.8■□□□□ 0.6
C9orf3-217ENST00000479161 FOCADQ5VW36 1801 aa18.79■□□□□ 0.6
C9orf3-217ENST00000479161 SALL3Q9BXA9 1300 aa18.79■□□□□ 0.6
C9orf3-217ENST00000479161 ERC2O15083 957 aa18.79■□□□□ 0.6
C9orf3-217ENST00000479161 USP2O75604 605 aaPredicted RBP18.79■□□□□ 0.6
C9orf3-217ENST00000479161 IDH1O75874 414 aaKnown RBP18.79■□□□□ 0.6
C9orf3-217ENST00000479161 IREB2P48200 963 aaKnown RBP18.79■□□□□ 0.6
C9orf3-217ENST00000479161 MAP3K10Q02779 954 aa18.79■□□□□ 0.6
C9orf3-217ENST00000479161 NFIAQ12857 509 aa18.79■□□□□ 0.6
C9orf3-217ENST00000479161 ATRNL1Q5VV63 1379 aa18.79■□□□□ 0.6
C9orf3-217ENST00000479161 LAMB1P07942 1786 aa18.78■□□□□ 0.6
C9orf3-217ENST00000479161 CDK5RAP2Q96SN8 1893 aa18.78■□□□□ 0.6
C9orf3-217ENST00000479161 FAM155AB1AL88 458 aaPredicted RBP18.78■□□□□ 0.6
C9orf3-217ENST00000479161 SLC10A3P09131 477 aa18.78■□□□□ 0.6
C9orf3-217ENST00000479161 ZNF157P51786 506 aaPredicted RBP18.78■□□□□ 0.6
C9orf3-217ENST00000479161 CACNB3P54284 484 aa18.78■□□□□ 0.6
C9orf3-217ENST00000479161 MAP2K1Q02750 393 aaPredicted RBP18.78■□□□□ 0.6
C9orf3-217ENST00000479161 ANKRD45Q5TZF3 282 aa18.78■□□□□ 0.6
C9orf3-217ENST00000479161 DCAF15Q66K64 600 aa18.78■□□□□ 0.6
C9orf3-217ENST00000479161 CYP4F22Q6NT55 531 aa18.78■□□□□ 0.6
C9orf3-217ENST00000479161 TICAM2Q86XR7 235 aa18.78■□□□□ 0.6
C9orf3-217ENST00000479161 BOLA2Q9H3K6 86 aa18.78■□□□□ 0.6
C9orf3-217ENST00000479161 STAP2Q9UGK3 403 aa18.78■□□□□ 0.6
C9orf3-217ENST00000479161 ANGEL1Q9UNK9 670 aaKnown RBP18.78■□□□□ 0.6
C9orf3-217ENST00000479161 UBE2Q2LH0YL09 131 aa18.77■□□□□ 0.6
C9orf3-217ENST00000479161 GOLIM4O00461 696 aa18.77■□□□□ 0.6
C9orf3-217ENST00000479161 GLRX3O76003 335 aaKnown RBP18.77■□□□□ 0.6
C9orf3-217ENST00000479161 CYP7A1P22680 504 aa18.77■□□□□ 0.6
C9orf3-217ENST00000479161 RGS3P49796 1198 aa18.77■□□□□ 0.6
C9orf3-217ENST00000479161 TTLL12Q14166 644 aaPredicted RBP18.77■□□□□ 0.6
C9orf3-217ENST00000479161 ANKRD13AQ8IZ07 590 aa18.77■□□□□ 0.6
C9orf3-217ENST00000479161 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.77■□□□□ 0.6
C9orf3-217ENST00000479161 IGHDP01880 384 aa18.76■□□□□ 0.59
C9orf3-217ENST00000479161 SLC9C2Q5TAH2 1124 aa18.76■□□□□ 0.59
C9orf3-217ENST00000479161 ZSCAN25Q6NSZ9 544 aa18.76■□□□□ 0.59
C9orf3-217ENST00000479161 ADGRA1Q86SQ6 560 aa18.76■□□□□ 0.59
C9orf3-217ENST00000479161 MAGEB6Q8N7X4 407 aa18.76■□□□□ 0.59
C9orf3-217ENST00000479161 DNAJC2Q99543 621 aaKnown RBP18.76■□□□□ 0.59
C9orf3-217ENST00000479161 ZNF112Q9UJU3 913 aa18.76■□□□□ 0.59
C9orf3-217ENST00000479161 NDUFB9Q9Y6M9 179 aa18.76■□□□□ 0.59
C9orf3-217ENST00000479161 TCRBV5S4A2TA0A5A2 114 aa18.75■□□□□ 0.59
C9orf3-217ENST00000479161 TBC1D12O60347 775 aa18.75■□□□□ 0.59
C9orf3-217ENST00000479161 PDE6AP16499 860 aa18.75■□□□□ 0.59
C9orf3-217ENST00000479161 MX1P20591 662 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms