RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 PTCH2Q9Y6C5 1203 aa19.61■□□□□ 0.73
GARNL3-215ENST00000478702 TNNI2P48788 182 aa19.6■□□□□ 0.73
GARNL3-215ENST00000478702 GTF2A2P52657 109 aa19.6■□□□□ 0.73
GARNL3-215ENST00000478702 CACNB3P54284 484 aa19.6■□□□□ 0.73
GARNL3-215ENST00000478702 ZFYVE28Q9HCC9 887 aa19.6■□□□□ 0.73
GARNL3-215ENST00000478702 PA2G4Q9UQ80 394 aaKnown RBP19.6■□□□□ 0.73
GARNL3-215ENST00000478702 SNCAIPQ9Y6H5 919 aa19.6■□□□□ 0.73
GARNL3-215ENST00000478702 SPDYE5A6NIY4 337 aa19.59■□□□□ 0.73
GARNL3-215ENST00000478702 SRGAP3O43295 1099 aa19.59■□□□□ 0.73
GARNL3-215ENST00000478702 HDLBPQ00341 1268 aaKnown RBP19.59■□□□□ 0.73
GARNL3-215ENST00000478702 CHAF1AQ13111 956 aaPredicted RBP19.59■□□□□ 0.73
GARNL3-215ENST00000478702 ITPRIPQ8IWB1 547 aa19.59■□□□□ 0.73
GARNL3-215ENST00000478702 CSADQ9Y600 493 aa19.59■□□□□ 0.73
GARNL3-215ENST00000478702 CEP290O15078 2479 aa19.59■□□□□ 0.73
GARNL3-215ENST00000478702 IFIT1P09914 478 aaKnown RBP19.58■□□□□ 0.72
GARNL3-215ENST00000478702 IL15P40933 162 aaPredicted RBP19.58■□□□□ 0.72
GARNL3-215ENST00000478702 SLC5A1P13866 664 aa19.57■□□□□ 0.72
GARNL3-215ENST00000478702 CAVIN4Q5BKX8 364 aa19.57■□□□□ 0.72
GARNL3-215ENST00000478702 LPIN2Q92539 896 aa19.57■□□□□ 0.72
GARNL3-215ENST00000478702 ARHGAP39Q9C0H5 1083 aa19.57■□□□□ 0.72
GARNL3-215ENST00000478702 SLC9C1Q4G0N8 1177 aa19.56■□□□□ 0.72
GARNL3-215ENST00000478702 VPS37DQ86XT2 251 aa19.56■□□□□ 0.72
GARNL3-215ENST00000478702 TBC1D22AQ8WUA7 517 aa19.56■□□□□ 0.72
GARNL3-215ENST00000478702 TEKT1Q969V4 418 aa19.56■□□□□ 0.72
GARNL3-215ENST00000478702 ZDHHC15Q96MV8 337 aa19.56■□□□□ 0.72
GARNL3-215ENST00000478702 TMEM106CQ9BVX2 250 aa19.56■□□□□ 0.72
GARNL3-215ENST00000478702 RCAN3Q9UKA8 241 aa19.56■□□□□ 0.72
GARNL3-215ENST00000478702 DOCK2Q92608 1830 aa19.55■□□□□ 0.72
GARNL3-215ENST00000478702 PTPRFP10586 1907 aa19.55■□□□□ 0.72
GARNL3-215ENST00000478702 MYH2Q9UKX2 1941 aa19.55■□□□□ 0.72
GARNL3-215ENST00000478702 PNMA6EA0A0J9YXQ4 647 aa19.55■□□□□ 0.72
GARNL3-215ENST00000478702 BTBD19C9JJ37 291 aa19.55■□□□□ 0.72
GARNL3-215ENST00000478702 IRF6O14896 467 aa19.55■□□□□ 0.72
GARNL3-215ENST00000478702 TLR2O60603 784 aa19.55■□□□□ 0.72
GARNL3-215ENST00000478702 BCAMP50895 628 aa19.55■□□□□ 0.72
GARNL3-215ENST00000478702 ATP2B3Q16720 1220 aa19.55■□□□□ 0.72
GARNL3-215ENST00000478702 APOBEC3HQ6NTF7 200 aaKnown RBP19.55■□□□□ 0.72
GARNL3-215ENST00000478702 FAM83AQ86UY5 434 aa19.55■□□□□ 0.72
GARNL3-215ENST00000478702 ERO1BQ86YB8 467 aa19.55■□□□□ 0.72
GARNL3-215ENST00000478702 ZKSCAN4Q969J2 545 aaPredicted RBP19.55■□□□□ 0.72
GARNL3-215ENST00000478702 WRNIP1Q96S55 665 aa19.55■□□□□ 0.72
GARNL3-215ENST00000478702 MRIQ9BWK5 157 aa19.55■□□□□ 0.72
GARNL3-215ENST00000478702 CEP126Q9P2H0 1117 aa19.55■□□□□ 0.72
GARNL3-215ENST00000478702 PANK1Q8TE04 598 aa19.54■□□□□ 0.72
GARNL3-215ENST00000478702 RPAP1Q9BWH6 1393 aaPredicted RBP19.54■□□□□ 0.72
GARNL3-215ENST00000478702 ZBTB7BO15156 539 aaPredicted RBP19.53■□□□□ 0.72
GARNL3-215ENST00000478702 FRAT2O75474 233 aaPredicted RBP19.53■□□□□ 0.72
GARNL3-215ENST00000478702 CETPP11597 493 aa19.53■□□□□ 0.72
GARNL3-215ENST00000478702 LACTBP83111 547 aaPredicted RBP19.53■□□□□ 0.72
GARNL3-215ENST00000478702 ARHGEF6Q15052 776 aa19.53■□□□□ 0.72
GARNL3-215ENST00000478702 FKBP1CQ5VVH2 108 aa19.53■□□□□ 0.72
GARNL3-215ENST00000478702 NBPF11Q86T75 865 aa19.53■□□□□ 0.72
GARNL3-215ENST00000478702 SH3TC2Q8TF17 1288 aa19.53■□□□□ 0.72
GARNL3-215ENST00000478702 C1orf115Q9H7X2 142 aa19.53■□□□□ 0.72
GARNL3-215ENST00000478702 ZCCHC17Q9NP64 241 aaKnown RBP19.53■□□□□ 0.72
GARNL3-215ENST00000478702 MYCP01106 439 aaPredicted RBP19.52■□□□□ 0.72
GARNL3-215ENST00000478702 MS4A1P11836 297 aa19.52■□□□□ 0.72
GARNL3-215ENST00000478702 CTGFP29279 349 aa19.52■□□□□ 0.72
GARNL3-215ENST00000478702 FXR1P51114 621 aaKnown RBP eCLIP19.52■□□□□ 0.72
GARNL3-215ENST00000478702 PPIL2Q13356 520 aa19.52■□□□□ 0.72
GARNL3-215ENST00000478702 POLA2Q14181 598 aa19.52■□□□□ 0.72
GARNL3-215ENST00000478702 PHIPQ8WWQ0 1821 aa19.52■□□□□ 0.72
GARNL3-215ENST00000478702 INPP5BP32019 993 aa19.51■□□□□ 0.71
GARNL3-215ENST00000478702 SNAPC2Q13487 334 aa19.51■□□□□ 0.71
GARNL3-215ENST00000478702 SLC4A8Q2Y0W8 1093 aa19.51■□□□□ 0.71
GARNL3-215ENST00000478702 HHIPL2Q6UWX4 724 aa19.51■□□□□ 0.71
GARNL3-215ENST00000478702 TMOD2Q9NZR1 351 aa19.51■□□□□ 0.71
GARNL3-215ENST00000478702 SUGT1Q9Y2Z0 365 aa19.51■□□□□ 0.71
GARNL3-215ENST00000478702 TRIOBPQ9H2D6 2365 aa19.51■□□□□ 0.71
GARNL3-215ENST00000478702 C17orf99Q6UX52 265 aa19.5■□□□□ 0.71
GARNL3-215ENST00000478702 MIGA2Q7L4E1 593 aa19.5■□□□□ 0.71
GARNL3-215ENST00000478702 SSH3Q8TE77 659 aa19.5■□□□□ 0.71
GARNL3-215ENST00000478702 MAST3O60307 1309 aa19.5■□□□□ 0.71
GARNL3-215ENST00000478702 DOCK3Q8IZD9 2030 aa19.49■□□□□ 0.71
GARNL3-215ENST00000478702 ZBTB22O15209 634 aa19.49■□□□□ 0.71
GARNL3-215ENST00000478702 ATP8B2P98198 1209 aa19.49■□□□□ 0.71
GARNL3-215ENST00000478702 PPATQ06203 517 aa19.49■□□□□ 0.71
GARNL3-215ENST00000478702 TFCP2Q12800 502 aa19.49■□□□□ 0.71
GARNL3-215ENST00000478702 MVPQ14764 893 aaKnown RBP19.49■□□□□ 0.71
GARNL3-215ENST00000478702 ZNF341Q9BYN7 854 aa19.49■□□□□ 0.71
GARNL3-215ENST00000478702 COLQQ9Y215 455 aaPredicted RBP19.49■□□□□ 0.71
GARNL3-215ENST00000478702 MAST2Q6P0Q8 1798 aa19.49■□□□□ 0.71
GARNL3-215ENST00000478702 ADGRA2Q96PE1 1338 aa19.49■□□□□ 0.71
GARNL3-215ENST00000478702 ECM2O94769 699 aaPredicted RBP19.48■□□□□ 0.71
GARNL3-215ENST00000478702 ADORA1P30542 326 aa19.48■□□□□ 0.71
GARNL3-215ENST00000478702 KIF22Q14807 665 aa19.48■□□□□ 0.71
GARNL3-215ENST00000478702 DCAF15Q66K64 600 aa19.48■□□□□ 0.71
GARNL3-215ENST00000478702 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.48■□□□□ 0.71
GARNL3-215ENST00000478702 HOOK2Q96ED9 719 aa19.48■□□□□ 0.71
GARNL3-215ENST00000478702 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.48■□□□□ 0.71
GARNL3-215ENST00000478702 A0A1B0GUL7 405 aa19.47■□□□□ 0.71
GARNL3-215ENST00000478702 WDHD1O75717 1129 aaPredicted RBP19.47■□□□□ 0.71
GARNL3-215ENST00000478702 GNRH1P01148 92 aa19.47■□□□□ 0.71
GARNL3-215ENST00000478702 PHKA1P46020 1223 aa19.47■□□□□ 0.71
GARNL3-215ENST00000478702 MOGSQ13724 837 aa19.47■□□□□ 0.71
GARNL3-215ENST00000478702 MTFR1Q15390 333 aa19.47■□□□□ 0.71
GARNL3-215ENST00000478702 FAM151AQ8WW52 585 aa19.47■□□□□ 0.71
GARNL3-215ENST00000478702 SHISA4Q96DD7 197 aa19.47■□□□□ 0.71
GARNL3-215ENST00000478702 CPA4Q9UI42 421 aa19.47■□□□□ 0.71
GARNL3-215ENST00000478702 ZNF112Q9UJU3 913 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms