RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 SPRYD7Q5W111 196 aa23.15■■□□□ 1.3
SREBF1-212ENST00000478616 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.15■■□□□ 1.3
SREBF1-212ENST00000478616 FAM83AQ86UY5 434 aa23.15■■□□□ 1.3
SREBF1-212ENST00000478616 ZFPM1Q8IX07 1006 aa23.15■■□□□ 1.3
SREBF1-212ENST00000478616 SPATA5Q8NB90 893 aa23.15■■□□□ 1.3
SREBF1-212ENST00000478616 DDX19BQ9UMR2 479 aa23.15■■□□□ 1.3
SREBF1-212ENST00000478616 DOCK2Q92608 1830 aa23.15■■□□□ 1.3
SREBF1-212ENST00000478616 RPAP1Q9BWH6 1393 aaPredicted RBP23.14■■□□□ 1.3
SREBF1-212ENST00000478616 AK9Q5TCS8 1911 aa23.14■■□□□ 1.3
SREBF1-212ENST00000478616 MS4A1P11836 297 aa23.14■■□□□ 1.29
SREBF1-212ENST00000478616 MECOMQ03112 1051 aa23.13■■□□□ 1.29
SREBF1-212ENST00000478616 PDE3AQ14432 1141 aa23.13■■□□□ 1.29
SREBF1-212ENST00000478616 TNS4Q8IZW8 715 aa23.13■■□□□ 1.29
SREBF1-212ENST00000478616 FAM163AQ96GL9 167 aaPredicted RBP23.13■■□□□ 1.29
SREBF1-212ENST00000478616 CCDC8Q9H0W5 538 aaPredicted RBP23.13■■□□□ 1.29
SREBF1-212ENST00000478616 ABCF2Q9UG63 623 aa23.13■■□□□ 1.29
SREBF1-212ENST00000478616 ATRNL1Q5VV63 1379 aa23.13■■□□□ 1.29
SREBF1-212ENST00000478616 TM4SF4P48230 202 aa23.12■■□□□ 1.29
SREBF1-212ENST00000478616 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.12■■□□□ 1.29
SREBF1-212ENST00000478616 CNKSR2Q8WXI2 1034 aa23.12■■□□□ 1.29
SREBF1-212ENST00000478616 NSUN4Q96CB9 384 aaKnown RBP23.12■■□□□ 1.29
SREBF1-212ENST00000478616 WNK4Q96J92 1243 aa23.12■■□□□ 1.29
SREBF1-212ENST00000478616 SNRKQ9NRH2 765 aa23.12■■□□□ 1.29
SREBF1-212ENST00000478616 SIPA1L1O43166 1804 aa23.11■■□□□ 1.29
SREBF1-212ENST00000478616 CA12O43570 354 aa23.11■■□□□ 1.29
SREBF1-212ENST00000478616 PPP1R12BO60237 982 aaPredicted RBP23.11■■□□□ 1.29
SREBF1-212ENST00000478616 RHBDL3P58872 404 aa23.11■■□□□ 1.29
SREBF1-212ENST00000478616 OS9Q13438 667 aaPredicted RBP23.11■■□□□ 1.29
SREBF1-212ENST00000478616 SH3BP5LQ7L8J4 393 aa23.11■■□□□ 1.29
SREBF1-212ENST00000478616 BEGAINQ9BUH8 593 aa23.11■■□□□ 1.29
SREBF1-212ENST00000478616 SAGE1Q9NXZ1 904 aa23.11■■□□□ 1.29
SREBF1-212ENST00000478616 FOCADQ5VW36 1801 aa23.1■■□□□ 1.29
SREBF1-212ENST00000478616 WDHD1O75717 1129 aaPredicted RBP23.1■■□□□ 1.29
SREBF1-212ENST00000478616 TRPA1O75762 1119 aa23.1■■□□□ 1.29
SREBF1-212ENST00000478616 CYP2E1P05181 493 aaPredicted RBP23.1■■□□□ 1.29
SREBF1-212ENST00000478616 SLURP2P0DP57 97 aa23.1■■□□□ 1.29
SREBF1-212ENST00000478616 TNNI2P48788 182 aa23.1■■□□□ 1.29
SREBF1-212ENST00000478616 RPAP2Q8IXW5 612 aaPredicted RBP23.1■■□□□ 1.29
SREBF1-212ENST00000478616 ZGPATQ8N5A5 531 aaKnown RBP23.1■■□□□ 1.29
SREBF1-212ENST00000478616 FAM151AQ8WW52 585 aa23.1■■□□□ 1.29
SREBF1-212ENST00000478616 ZNF512BQ96KM6 892 aaPredicted RBP23.1■■□□□ 1.29
SREBF1-212ENST00000478616 R3HDMLQ9H3Y0 253 aa23.1■■□□□ 1.29
SREBF1-212ENST00000478616 DDX4Q9NQI0 724 aaKnown RBP23.1■■□□□ 1.29
SREBF1-212ENST00000478616 USP40Q9NVE5 1235 aa23.1■■□□□ 1.29
SREBF1-212ENST00000478616 MROH7-TTC4A0A0A0MT08 1334 aa23.09■■□□□ 1.29
SREBF1-212ENST00000478616 UNCXA6NJT0 531 aa23.09■■□□□ 1.29
SREBF1-212ENST00000478616 GPR75-ASB3A0A0A6YYF3 556 aa23.08■■□□□ 1.29
SREBF1-212ENST00000478616 UQCRFS1P1P0C7P4 283 aa23.08■■□□□ 1.29
SREBF1-212ENST00000478616 IREB2P48200 963 aaKnown RBP23.08■■□□□ 1.29
SREBF1-212ENST00000478616 TCP10Q12799 353 aa23.08■■□□□ 1.29
SREBF1-212ENST00000478616 VGLL4Q14135 290 aa23.08■■□□□ 1.29
SREBF1-212ENST00000478616 GORABQ5T7V8 394 aa23.08■■□□□ 1.29
SREBF1-212ENST00000478616 ERICH6Q7L0X2 663 aa23.08■■□□□ 1.29
SREBF1-212ENST00000478616 ANKRD13AQ8IZ07 590 aa23.08■■□□□ 1.29
SREBF1-212ENST00000478616 RHPN1Q8TCX5 695 aa23.08■■□□□ 1.29
SREBF1-212ENST00000478616 SLC10A4Q96EP9 437 aa23.08■■□□□ 1.29
SREBF1-212ENST00000478616 IDI2Q9BXS1 227 aa23.08■■□□□ 1.29
SREBF1-212ENST00000478616 IL1RAPL2Q9NP60 686 aa23.08■■□□□ 1.29
SREBF1-212ENST00000478616 BTDP43251 543 aa23.07■■□□□ 1.28
SREBF1-212ENST00000478616 ZAP70P43403 619 aa23.07■■□□□ 1.28
SREBF1-212ENST00000478616 ADGRA1Q86SQ6 560 aa23.07■■□□□ 1.28
SREBF1-212ENST00000478616 DZIP1Q86YF9 867 aaKnown RBP23.07■■□□□ 1.28
SREBF1-212ENST00000478616 ELP3Q9H9T3 547 aa23.07■■□□□ 1.28
SREBF1-212ENST00000478616 PIH1D3Q9NQM4 214 aaKnown RBP23.07■■□□□ 1.28
SREBF1-212ENST00000478616 TMOD2Q9NZR1 351 aa23.07■■□□□ 1.28
SREBF1-212ENST00000478616 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.07■■□□□ 1.28
SREBF1-212ENST00000478616 SNCAIPQ9Y6H5 919 aa23.07■■□□□ 1.28
SREBF1-212ENST00000478616 NDUFB9Q9Y6M9 179 aa23.07■■□□□ 1.28
SREBF1-212ENST00000478616 RGS3P49796 1198 aa23.06■■□□□ 1.28
SREBF1-212ENST00000478616 TTC39AQ5SRH9 613 aa23.06■■□□□ 1.28
SREBF1-212ENST00000478616 PHIPQ8WWQ0 1821 aa23.05■■□□□ 1.28
SREBF1-212ENST00000478616 IGF2BP3O00425 579 aaKnown RBP eCLIP23.05■■□□□ 1.28
SREBF1-212ENST00000478616 ZBTB48P10074 688 aaPredicted RBP23.05■■□□□ 1.28
SREBF1-212ENST00000478616 MAP3K9P80192 1104 aa23.05■■□□□ 1.28
SREBF1-212ENST00000478616 SPTY2D1Q68D10 685 aaPredicted RBP23.05■■□□□ 1.28
SREBF1-212ENST00000478616 MIGA2Q7L4E1 593 aa23.05■■□□□ 1.28
SREBF1-212ENST00000478616 REM2Q8IYK8 340 aaPredicted RBP23.05■■□□□ 1.28
SREBF1-212ENST00000478616 MS4A4AQ96JQ5 239 aa23.05■■□□□ 1.28
SREBF1-212ENST00000478616 PTPN18Q99952 460 aa23.05■■□□□ 1.28
SREBF1-212ENST00000478616 DDTLA6NHG4 134 aaPredicted RBP23.04■■□□□ 1.28
SREBF1-212ENST00000478616 ZKSCAN4Q969J2 545 aaPredicted RBP23.04■■□□□ 1.28
SREBF1-212ENST00000478616 OPTNQ96CV9 577 aa23.04■■□□□ 1.28
SREBF1-212ENST00000478616 ANTXR1Q9H6X2 564 aa23.04■■□□□ 1.28
SREBF1-212ENST00000478616 ZNF112Q9UJU3 913 aa23.04■■□□□ 1.28
SREBF1-212ENST00000478616 TESPA1A2RU30 521 aaPredicted RBP23.03■■□□□ 1.28
SREBF1-212ENST00000478616 TBC1D8O95759 1140 aa23.03■■□□□ 1.28
SREBF1-212ENST00000478616 INPP5BP32019 993 aa23.03■■□□□ 1.28
SREBF1-212ENST00000478616 CCDC158Q5M9N0 1113 aa23.03■■□□□ 1.28
SREBF1-212ENST00000478616 AACSQ86V21 672 aa23.03■■□□□ 1.28
SREBF1-212ENST00000478616 YTHDC1Q96MU7 727 aaKnown RBP23.03■■□□□ 1.28
SREBF1-212ENST00000478616 ENTPD3O75355 529 aa23.02■■□□□ 1.28
SREBF1-212ENST00000478616 MAP3K10Q02779 954 aa23.02■■□□□ 1.28
SREBF1-212ENST00000478616 ERC1Q8IUD2 1116 aa23.02■■□□□ 1.28
SREBF1-212ENST00000478616 CFHR5Q9BXR6 569 aa23.02■■□□□ 1.28
SREBF1-212ENST00000478616 RAI14Q9P0K7 980 aa23.02■■□□□ 1.28
SREBF1-212ENST00000478616 PTPRFP10586 1907 aa23.02■■□□□ 1.28
SREBF1-212ENST00000478616 IFNL1Q8IU54 200 aa23.01■■□□□ 1.27
SREBF1-212ENST00000478616 WRNIP1Q96S55 665 aa23.01■■□□□ 1.27
SREBF1-212ENST00000478616 MANSC4A6NHS7 340 aaPredicted RBP23■■□□□ 1.27
SREBF1-212ENST00000478616 SPDYE5A6NIY4 337 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms