RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 FAM151AQ8WW52 585 aa17.03■□□□□ 0.32
RCC1-211ENST00000478232 OPTNQ96CV9 577 aa17.03■□□□□ 0.32
RCC1-211ENST00000478232 NEUROD6Q96NK8 337 aa17.03■□□□□ 0.32
RCC1-211ENST00000478232 R3HDMLQ9H3Y0 253 aa17.03■□□□□ 0.32
RCC1-211ENST00000478232 ARAP2Q8WZ64 1704 aa17.03■□□□□ 0.32
RCC1-211ENST00000478232 PDS5AQ29RF7 1337 aaKnown RBP17.02■□□□□ 0.32
RCC1-211ENST00000478232 PNMA6EA0A0J9YXQ4 647 aa17.02■□□□□ 0.32
RCC1-211ENST00000478232 IGF2BP3O00425 579 aaKnown RBP eCLIP17.02■□□□□ 0.32
RCC1-211ENST00000478232 VGLL4Q14135 290 aa17.02■□□□□ 0.32
RCC1-211ENST00000478232 DCAF15Q66K64 600 aa17.02■□□□□ 0.32
RCC1-211ENST00000478232 SLF2Q8IX21 1173 aa17.02■□□□□ 0.32
RCC1-211ENST00000478232 USP40Q9NVE5 1235 aa17.02■□□□□ 0.32
RCC1-211ENST00000478232 ATP8B2P98198 1209 aa17.01■□□□□ 0.31
RCC1-211ENST00000478232 RASGRF1Q13972 1273 aa17.01■□□□□ 0.31
RCC1-211ENST00000478232 GORABQ5T7V8 394 aa17.01■□□□□ 0.31
RCC1-211ENST00000478232 FTSJ3Q8IY81 847 aaKnown RBP17.01■□□□□ 0.31
RCC1-211ENST00000478232 FAM163AQ96GL9 167 aaPredicted RBP17.01■□□□□ 0.31
RCC1-211ENST00000478232 MS4A4AQ96JQ5 239 aa17.01■□□□□ 0.31
RCC1-211ENST00000478232 ABCF2Q9UG63 623 aa17.01■□□□□ 0.31
RCC1-211ENST00000478232 ZBED9Q6R2W3 1325 aa17■□□□□ 0.31
RCC1-211ENST00000478232 GTF2A2P52657 109 aa17■□□□□ 0.31
RCC1-211ENST00000478232 ERO1BQ86YB8 467 aa17■□□□□ 0.31
RCC1-211ENST00000478232 PTPN18Q99952 460 aa17■□□□□ 0.31
RCC1-211ENST00000478232 ZNF341Q9BYN7 854 aa17■□□□□ 0.31
RCC1-211ENST00000478232 RPAP1Q9BWH6 1393 aaPredicted RBP17■□□□□ 0.31
RCC1-211ENST00000478232 SPDYE5A6NIY4 337 aa16.99■□□□□ 0.31
RCC1-211ENST00000478232 ZBTB7BO15156 539 aaPredicted RBP16.99■□□□□ 0.31
RCC1-211ENST00000478232 MLLT1Q03111 559 aaPredicted RBP16.99■□□□□ 0.31
RCC1-211ENST00000478232 TCP10Q12799 353 aa16.99■□□□□ 0.31
RCC1-211ENST00000478232 POLA2Q14181 598 aa16.99■□□□□ 0.31
RCC1-211ENST00000478232 MIGA2Q7L4E1 593 aa16.99■□□□□ 0.31
RCC1-211ENST00000478232 DZIP1Q86YF9 867 aaKnown RBP16.99■□□□□ 0.31
RCC1-211ENST00000478232 SSH3Q8TE77 659 aa16.99■□□□□ 0.31
RCC1-211ENST00000478232 WRNIP1Q96S55 665 aa16.99■□□□□ 0.31
RCC1-211ENST00000478232 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.99■□□□□ 0.31
RCC1-211ENST00000478232 NFIAQ12857 509 aa16.98■□□□□ 0.31
RCC1-211ENST00000478232 ERICH6Q7L0X2 663 aa16.98■□□□□ 0.31
RCC1-211ENST00000478232 CNKSR2Q8WXI2 1034 aa16.98■□□□□ 0.31
RCC1-211ENST00000478232 ZKSCAN4Q969J2 545 aaPredicted RBP16.98■□□□□ 0.31
RCC1-211ENST00000478232 OTUD5Q96G74 571 aa16.98■□□□□ 0.31
RCC1-211ENST00000478232 GPR108Q9NPR9 543 aa16.98■□□□□ 0.31
RCC1-211ENST00000478232 HMG20BQ9P0W2 317 aa16.98■□□□□ 0.31
RCC1-211ENST00000478232 FAM198AQ9UFP1 575 aa16.98■□□□□ 0.31
RCC1-211ENST00000478232 GAKO14976 1311 aa16.97■□□□□ 0.31
RCC1-211ENST00000478232 CCL15-CCL14A0A0B4J2E2 113 aa16.97■□□□□ 0.31
RCC1-211ENST00000478232 ENTPD3O75355 529 aa16.97■□□□□ 0.31
RCC1-211ENST00000478232 UQCRFS1P1P0C7P4 283 aa16.97■□□□□ 0.31
RCC1-211ENST00000478232 CRHR2Q13324 411 aa16.97■□□□□ 0.31
RCC1-211ENST00000478232 CCL15Q16663 113 aa16.97■□□□□ 0.31
RCC1-211ENST00000478232 FBXO46Q6PJ61 603 aaPredicted RBP16.97■□□□□ 0.31
RCC1-211ENST00000478232 ITPRIPQ8IWB1 547 aa16.97■□□□□ 0.31
RCC1-211ENST00000478232 SPATA5Q8NB90 893 aa16.97■□□□□ 0.31
RCC1-211ENST00000478232 BRI3BPQ8WY22 251 aa16.97■□□□□ 0.31
RCC1-211ENST00000478232 IDI2Q9BXS1 227 aa16.97■□□□□ 0.31
RCC1-211ENST00000478232 ZNF112Q9UJU3 913 aa16.97■□□□□ 0.31
RCC1-211ENST00000478232 HPS5Q9UPZ3 1129 aa16.97■□□□□ 0.31
RCC1-211ENST00000478232 SNCAIPQ9Y6H5 919 aa16.97■□□□□ 0.31
RCC1-211ENST00000478232 SURF6O75683 361 aaKnown RBP16.96■□□□□ 0.31
RCC1-211ENST00000478232 LDHCP07864 332 aa16.96■□□□□ 0.31
RCC1-211ENST00000478232 CETPP11597 493 aa16.96■□□□□ 0.31
RCC1-211ENST00000478232 GPR75-ASB3A0A0A6YYF3 556 aa16.95■□□□□ 0.3
RCC1-211ENST00000478232 WDHD1O75717 1129 aaPredicted RBP16.95■□□□□ 0.3
RCC1-211ENST00000478232 MS4A1P11836 297 aa16.95■□□□□ 0.3
RCC1-211ENST00000478232 RLBP1P12271 317 aa16.95■□□□□ 0.3
RCC1-211ENST00000478232 ARID4AP29374 1257 aaPredicted RBP16.95■□□□□ 0.3
RCC1-211ENST00000478232 GSTO1P78417 241 aa16.95■□□□□ 0.3
RCC1-211ENST00000478232 MECOMQ03112 1051 aa16.95■□□□□ 0.3
RCC1-211ENST00000478232 PPATQ06203 517 aa16.95■□□□□ 0.3
RCC1-211ENST00000478232 PPIL2Q13356 520 aa16.95■□□□□ 0.3
RCC1-211ENST00000478232 OS9Q13438 667 aaPredicted RBP16.95■□□□□ 0.3
RCC1-211ENST00000478232 SNAPC2Q13487 334 aa16.95■□□□□ 0.3
RCC1-211ENST00000478232 ZFPM1Q8IX07 1006 aa16.95■□□□□ 0.3
RCC1-211ENST00000478232 ERO1AQ96HE7 468 aa16.95■□□□□ 0.3
RCC1-211ENST00000478232 ZFYVE28Q9HCC9 887 aa16.95■□□□□ 0.3
RCC1-211ENST00000478232 NOP58Q9Y2X3 529 aaKnown RBP16.95■□□□□ 0.3
RCC1-211ENST00000478232 IRF6O14896 467 aa16.94■□□□□ 0.3
RCC1-211ENST00000478232 MAP4K4O95819 1239 aaPredicted RBP16.94■□□□□ 0.3
RCC1-211ENST00000478232 INPP5BP32019 993 aa16.94■□□□□ 0.3
RCC1-211ENST00000478232 RGS3P49796 1198 aa16.94■□□□□ 0.3
RCC1-211ENST00000478232 SP3Q02447 781 aa16.94■□□□□ 0.3
RCC1-211ENST00000478232 TNNI3KQ59H18 835 aa16.94■□□□□ 0.3
RCC1-211ENST00000478232 CCDC158Q5M9N0 1113 aa16.94■□□□□ 0.3
RCC1-211ENST00000478232 ZCCHC17Q9NP64 241 aaKnown RBP16.94■□□□□ 0.3
RCC1-211ENST00000478232 FPGT-TNNI3KV9GXZ4 949 aa16.94■□□□□ 0.3
RCC1-211ENST00000478232 MYH13Q9UKX3 1938 aa16.94■□□□□ 0.3
RCC1-211ENST00000478232 MROH7-TTC4A0A0A0MT08 1334 aa16.94■□□□□ 0.3
RCC1-211ENST00000478232 BTDP43251 543 aa16.93■□□□□ 0.3
RCC1-211ENST00000478232 TAF1CQ15572 869 aaPredicted RBP16.93■□□□□ 0.3
RCC1-211ENST00000478232 TBC1D9Q6ZT07 1266 aa16.93■□□□□ 0.3
RCC1-211ENST00000478232 ZSCAN29Q8IWY8 852 aaPredicted RBP16.93■□□□□ 0.3
RCC1-211ENST00000478232 C1orf115Q9H7X2 142 aa16.93■□□□□ 0.3
RCC1-211ENST00000478232 RAI14Q9P0K7 980 aa16.93■□□□□ 0.3
RCC1-211ENST00000478232 TRIM17Q9Y577 477 aa16.93■□□□□ 0.3
RCC1-211ENST00000478232 NPM3O75607 178 aaKnown RBP16.92■□□□□ 0.3
RCC1-211ENST00000478232 MAP3K10Q02779 954 aa16.92■□□□□ 0.3
RCC1-211ENST00000478232 ARHGEF6Q15052 776 aa16.92■□□□□ 0.3
RCC1-211ENST00000478232 NOL9Q5SY16 702 aaKnown RBP16.92■□□□□ 0.3
RCC1-211ENST00000478232 PI16Q6UXB8 463 aa16.92■□□□□ 0.3
RCC1-211ENST00000478232 OTOP1Q7RTM1 612 aa16.92■□□□□ 0.3
RCC1-211ENST00000478232 FAM43AQ8N2R8 423 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms