RNA–Protein interactions for RNA: ENST00000478230.5

SNX21-210, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 907 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-210ENST00000478230 FAM151AQ8WW52 585 aa18.47■□□□□ 0.55
SNX21-210ENST00000478230 YTHDC1Q96MU7 727 aaKnown RBP18.47■□□□□ 0.55
SNX21-210ENST00000478230 DBNDD2Q9BQY9 259 aa18.47■□□□□ 0.55
SNX21-210ENST00000478230 NOL10Q9BSC4 688 aaKnown RBP18.47■□□□□ 0.55
SNX21-210ENST00000478230 SAGE1Q9NXZ1 904 aa18.47■□□□□ 0.55
SNX21-210ENST00000478230 EXOC6BQ9Y2D4 811 aa18.47■□□□□ 0.55
SNX21-210ENST00000478230 THSD7BQ9C0I4 1608 aa18.47■□□□□ 0.55
SNX21-210ENST00000478230 SREBF2Q12772 1141 aa18.46■□□□□ 0.55
SNX21-210ENST00000478230 CDC42EP5Q6NZY7 148 aa18.46■□□□□ 0.55
SNX21-210ENST00000478230 TMED8Q6PL24 325 aaPredicted RBP18.46■□□□□ 0.55
SNX21-210ENST00000478230 RHPN1Q8TCX5 695 aa18.46■□□□□ 0.55
SNX21-210ENST00000478230 RAI14Q9P0K7 980 aa18.46■□□□□ 0.55
SNX21-210ENST00000478230 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.46■□□□□ 0.55
SNX21-210ENST00000478230 GAKO14976 1311 aa18.46■□□□□ 0.55
SNX21-210ENST00000478230 USP2O75604 605 aaPredicted RBP18.45■□□□□ 0.54
SNX21-210ENST00000478230 ZBTB48P10074 688 aaPredicted RBP18.45■□□□□ 0.54
SNX21-210ENST00000478230 HSPA8P11142 646 aaKnown RBP18.45■□□□□ 0.54
SNX21-210ENST00000478230 MCAMP43121 646 aa18.45■□□□□ 0.54
SNX21-210ENST00000478230 LBX1P52954 281 aa18.45■□□□□ 0.54
SNX21-210ENST00000478230 AACSQ86V21 672 aa18.45■□□□□ 0.54
SNX21-210ENST00000478230 TEPSINQ96N21 525 aa18.45■□□□□ 0.54
SNX21-210ENST00000478230 TMEM39BQ9GZU3 492 aa18.45■□□□□ 0.54
SNX21-210ENST00000478230 CSADQ9Y600 493 aa18.45■□□□□ 0.54
SNX21-210ENST00000478230 AOX1Q06278 1338 aa18.45■□□□□ 0.54
SNX21-210ENST00000478230 RPAP1Q9BWH6 1393 aaPredicted RBP18.44■□□□□ 0.54
SNX21-210ENST00000478230 ENTPD3O75355 529 aa18.44■□□□□ 0.54
SNX21-210ENST00000478230 MAP3K9P80192 1104 aa18.44■□□□□ 0.54
SNX21-210ENST00000478230 MECOMQ03112 1051 aa18.44■□□□□ 0.54
SNX21-210ENST00000478230 EAF2Q96CJ1 260 aaPredicted RBP18.44■□□□□ 0.54
SNX21-210ENST00000478230 CSRNP1Q96S65 589 aa18.44■□□□□ 0.54
SNX21-210ENST00000478230 CCDC8Q9H0W5 538 aaPredicted RBP18.44■□□□□ 0.54
SNX21-210ENST00000478230 MROH7-TTC4A0A0A0MT08 1334 aa18.44■□□□□ 0.54
SNX21-210ENST00000478230 MANSC4A6NHS7 340 aaPredicted RBP18.43■□□□□ 0.54
SNX21-210ENST00000478230 BAG3O95817 575 aa18.43■□□□□ 0.54
SNX21-210ENST00000478230 IFIT2P09913 472 aaKnown RBP18.43■□□□□ 0.54
SNX21-210ENST00000478230 PLCG2P16885 1265 aa18.43■□□□□ 0.54
SNX21-210ENST00000478230 CACNB3P54284 484 aa18.43■□□□□ 0.54
SNX21-210ENST00000478230 C20orf194Q5TEA3 1177 aa18.43■□□□□ 0.54
SNX21-210ENST00000478230 SPRYD7Q5W111 196 aa18.43■□□□□ 0.54
SNX21-210ENST00000478230 IDI2Q9BXS1 227 aa18.43■□□□□ 0.54
SNX21-210ENST00000478230 DBNLQ9UJU6 430 aaKnown RBP18.43■□□□□ 0.54
SNX21-210ENST00000478230 GPR75-ASB3A0A0A6YYF3 556 aa18.42■□□□□ 0.54
SNX21-210ENST00000478230 ALDH1A1P00352 501 aa18.42■□□□□ 0.54
SNX21-210ENST00000478230 TM4SF4P48230 202 aa18.42■□□□□ 0.54
SNX21-210ENST00000478230 COL13A1Q5TAT6 717 aaPredicted RBP18.42■□□□□ 0.54
SNX21-210ENST00000478230 OTUD7BQ6GQQ9 843 aa18.42■□□□□ 0.54
SNX21-210ENST00000478230 CERS3Q8IU89 383 aa18.42■□□□□ 0.54
SNX21-210ENST00000478230 TNS4Q8IZW8 715 aa18.42■□□□□ 0.54
SNX21-210ENST00000478230 NSUN4Q96CB9 384 aaKnown RBP18.42■□□□□ 0.54
SNX21-210ENST00000478230 ZNF341Q9BYN7 854 aa18.42■□□□□ 0.54
SNX21-210ENST00000478230 NPM3O75607 178 aaKnown RBP18.41■□□□□ 0.54
SNX21-210ENST00000478230 BTDP43251 543 aa18.41■□□□□ 0.54
SNX21-210ENST00000478230 RRP1P56182 461 aaKnown RBP18.41■□□□□ 0.54
SNX21-210ENST00000478230 TCP10Q12799 353 aa18.41■□□□□ 0.54
SNX21-210ENST00000478230 TTF1Q15361 905 aaPredicted RBP18.41■□□□□ 0.54
SNX21-210ENST00000478230 NAA16Q6N069 864 aaPredicted RBP18.41■□□□□ 0.54
SNX21-210ENST00000478230 TBC1D9Q6ZT07 1266 aa18.41■□□□□ 0.54
SNX21-210ENST00000478230 SIRT2Q8IXJ6 389 aa18.41■□□□□ 0.54
SNX21-210ENST00000478230 ZIC5Q96T25 663 aa18.41■□□□□ 0.54
SNX21-210ENST00000478230 IL1RAPL2Q9NP60 686 aa18.41■□□□□ 0.54
SNX21-210ENST00000478230 SNRKQ9NRH2 765 aa18.41■□□□□ 0.54
SNX21-210ENST00000478230 TRPA1O75762 1119 aa18.4■□□□□ 0.54
SNX21-210ENST00000478230 PI16Q6UXB8 463 aa18.4■□□□□ 0.54
SNX21-210ENST00000478230 ZSCAN29Q8IWY8 852 aaPredicted RBP18.4■□□□□ 0.54
SNX21-210ENST00000478230 WNK4Q96J92 1243 aa18.4■□□□□ 0.54
SNX21-210ENST00000478230 RNF186Q9NXI6 227 aa18.4■□□□□ 0.54
SNX21-210ENST00000478230 SSC5DA1L4H1 1573 aa18.39■□□□□ 0.53
SNX21-210ENST00000478230 APBB1O00213 710 aa18.39■□□□□ 0.53
SNX21-210ENST00000478230 ZAP70P43403 619 aa18.39■□□□□ 0.53
SNX21-210ENST00000478230 MAP3K12Q12852 859 aa18.39■□□□□ 0.53
SNX21-210ENST00000478230 AAMPQ13685 434 aa18.39■□□□□ 0.53
SNX21-210ENST00000478230 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.39■□□□□ 0.53
SNX21-210ENST00000478230 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.39■□□□□ 0.53
SNX21-210ENST00000478230 LRRCC1Q9C099 1032 aa18.39■□□□□ 0.53
SNX21-210ENST00000478230 CYP2E1P05181 493 aaPredicted RBP18.38■□□□□ 0.53
SNX21-210ENST00000478230 RGS3P49796 1198 aa18.38■□□□□ 0.53
SNX21-210ENST00000478230 CLMNQ96JQ2 1002 aa18.38■□□□□ 0.53
SNX21-210ENST00000478230 WRNIP1Q96S55 665 aa18.38■□□□□ 0.53
SNX21-210ENST00000478230 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.38■□□□□ 0.53
SNX21-210ENST00000478230 FAM198AQ9UFP1 575 aa18.38■□□□□ 0.53
SNX21-210ENST00000478230 FZD1Q9UP38 647 aa18.38■□□□□ 0.53
SNX21-210ENST00000478230 MYH2Q9UKX2 1941 aa18.37■□□□□ 0.53
SNX21-210ENST00000478230 NFIAQ12857 509 aa18.37■□□□□ 0.53
SNX21-210ENST00000478230 MKRN3Q13064 507 aaKnown RBP18.37■□□□□ 0.53
SNX21-210ENST00000478230 IFFO2Q5TF58 517 aa18.37■□□□□ 0.53
SNX21-210ENST00000478230 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.37■□□□□ 0.53
SNX21-210ENST00000478230 ELP3Q9H9T3 547 aa18.37■□□□□ 0.53
SNX21-210ENST00000478230 TLR7Q9NYK1 1049 aaKnown RBP18.37■□□□□ 0.53
SNX21-210ENST00000478230 WDHD1O75717 1129 aaPredicted RBP18.36■□□□□ 0.53
SNX21-210ENST00000478230 IDH1O75874 414 aaKnown RBP18.36■□□□□ 0.53
SNX21-210ENST00000478230 GTF2A2P52657 109 aa18.36■□□□□ 0.53
SNX21-210ENST00000478230 PPP4CP60510 307 aa18.36■□□□□ 0.53
SNX21-210ENST00000478230 VGLL4Q14135 290 aa18.36■□□□□ 0.53
SNX21-210ENST00000478230 ERO1BQ86YB8 467 aa18.36■□□□□ 0.53
SNX21-210ENST00000478230 TEX11Q8IYF3 940 aa18.36■□□□□ 0.53
SNX21-210ENST00000478230 OPTNQ96CV9 577 aa18.36■□□□□ 0.53
SNX21-210ENST00000478230 RHBDL3P58872 404 aa18.35■□□□□ 0.53
SNX21-210ENST00000478230 MIGA2Q7L4E1 593 aa18.35■□□□□ 0.53
SNX21-210ENST00000478230 GPATCH3Q96I76 525 aa18.35■□□□□ 0.53
SNX21-210ENST00000478230 DCTPP1Q9H773 170 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms