RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 ERICH6Q7L0X2 663 aa27.92■■■□□ 2.06
TRAF4-211ENST00000478021 RHPN1Q8TCX5 695 aa27.92■■■□□ 2.06
TRAF4-211ENST00000478021 AACSQ86V21 672 aa27.91■■■□□ 2.06
TRAF4-211ENST00000478021 TEPSINQ96N21 525 aa27.91■■■□□ 2.06
TRAF4-211ENST00000478021 BCL11AQ9H165 835 aa27.91■■■□□ 2.06
TRAF4-211ENST00000478021 PPP1R12BO60237 982 aaPredicted RBP27.9■■■□□ 2.06
TRAF4-211ENST00000478021 KIF23Q02241 960 aaPredicted RBP27.9■■■□□ 2.06
TRAF4-211ENST00000478021 CDC42EP5Q6NZY7 148 aa27.9■■■□□ 2.06
TRAF4-211ENST00000478021 BEGAINQ9BUH8 593 aa27.9■■■□□ 2.06
TRAF4-211ENST00000478021 OTOFQ9HC10 1997 aa27.9■■■□□ 2.06
TRAF4-211ENST00000478021 MYO5AQ9Y4I1 1855 aaKnown RBP27.89■■■□□ 2.06
TRAF4-211ENST00000478021 MECOMQ03112 1051 aa27.89■■■□□ 2.06
TRAF4-211ENST00000478021 USP40Q9NVE5 1235 aa27.89■■■□□ 2.06
TRAF4-211ENST00000478021 GAKO14976 1311 aa27.89■■■□□ 2.05
TRAF4-211ENST00000478021 LDLRAD1Q5T700 205 aa27.88■■■□□ 2.05
TRAF4-211ENST00000478021 ZNF384Q8TF68 577 aa27.88■■■□□ 2.05
TRAF4-211ENST00000478021 RAI14Q9P0K7 980 aa27.88■■■□□ 2.05
TRAF4-211ENST00000478021 USP2O75604 605 aaPredicted RBP27.87■■■□□ 2.05
TRAF4-211ENST00000478021 CTCFP49711 727 aaPredicted RBP27.87■■■□□ 2.05
TRAF4-211ENST00000478021 MKRN3Q13064 507 aaKnown RBP27.87■■■□□ 2.05
TRAF4-211ENST00000478021 MAP3K11Q16584 847 aa27.87■■■□□ 2.05
TRAF4-211ENST00000478021 KIF1BPQ96EK5 621 aa27.87■■■□□ 2.05
TRAF4-211ENST00000478021 TSKSQ9UJT2 592 aa27.87■■■□□ 2.05
TRAF4-211ENST00000478021 AK9Q5TCS8 1911 aa27.86■■■□□ 2.05
TRAF4-211ENST00000478021 ZAP70P43403 619 aa27.86■■■□□ 2.05
TRAF4-211ENST00000478021 TCP10Q12799 353 aa27.86■■■□□ 2.05
TRAF4-211ENST00000478021 NFIAQ12857 509 aa27.86■■■□□ 2.05
TRAF4-211ENST00000478021 FKBP1CQ5VVH2 108 aa27.86■■■□□ 2.05
TRAF4-211ENST00000478021 FAM83AQ86UY5 434 aa27.86■■■□□ 2.05
TRAF4-211ENST00000478021 SLF2Q8IX21 1173 aa27.86■■■□□ 2.05
TRAF4-211ENST00000478021 CLMNQ96JQ2 1002 aa27.86■■■□□ 2.05
TRAF4-211ENST00000478021 LRP2BPQ9P2M1 347 aa27.86■■■□□ 2.05
TRAF4-211ENST00000478021 MROH7-TTC4A0A0A0MT08 1334 aa27.86■■■□□ 2.05
TRAF4-211ENST00000478021 MAST2Q6P0Q8 1798 aa27.86■■■□□ 2.05
TRAF4-211ENST00000478021 HSPA8P11142 646 aaKnown RBP27.85■■■□□ 2.05
TRAF4-211ENST00000478021 BTDP43251 543 aa27.85■■■□□ 2.05
TRAF4-211ENST00000478021 IREB2P48200 963 aaKnown RBP27.85■■■□□ 2.05
TRAF4-211ENST00000478021 LBX1P52954 281 aa27.85■■■□□ 2.05
TRAF4-211ENST00000478021 NSUN4Q96CB9 384 aaKnown RBP27.85■■■□□ 2.05
TRAF4-211ENST00000478021 ZNF512BQ96KM6 892 aaPredicted RBP27.85■■■□□ 2.05
TRAF4-211ENST00000478021 RAB11FIP3O75154 756 aa27.84■■■□□ 2.05
TRAF4-211ENST00000478021 CYP2E1P05181 493 aaPredicted RBP27.84■■■□□ 2.05
TRAF4-211ENST00000478021 CLASRPQ8N2M8 674 aaKnown RBP27.84■■■□□ 2.05
TRAF4-211ENST00000478021 NDUFB9Q9Y6M9 179 aa27.84■■■□□ 2.05
TRAF4-211ENST00000478021 FAM151AQ8WW52 585 aa27.83■■■□□ 2.05
TRAF4-211ENST00000478021 FAM163AQ96GL9 167 aaPredicted RBP27.83■■■□□ 2.05
TRAF4-211ENST00000478021 FAM198AQ9UFP1 575 aa27.83■■■□□ 2.05
TRAF4-211ENST00000478021 GSTO1P78417 241 aa27.82■■■□□ 2.04
TRAF4-211ENST00000478021 SLC10A4Q96EP9 437 aa27.82■■■□□ 2.04
TRAF4-211ENST00000478021 CSRNP1Q96S65 589 aa27.82■■■□□ 2.04
TRAF4-211ENST00000478021 CRBNQ96SW2 442 aa27.82■■■□□ 2.04
TRAF4-211ENST00000478021 PIH1D3Q9NQM4 214 aaKnown RBP27.82■■■□□ 2.04
TRAF4-211ENST00000478021 RPAP1Q9BWH6 1393 aaPredicted RBP27.82■■■□□ 2.04
TRAF4-211ENST00000478021 LDHCP07864 332 aa27.8■■■□□ 2.04
TRAF4-211ENST00000478021 IFIT2P09913 472 aaKnown RBP27.8■■■□□ 2.04
TRAF4-211ENST00000478021 ANKRD13AQ8IZ07 590 aa27.8■■■□□ 2.04
TRAF4-211ENST00000478021 RFX7Q2KHR2 1363 aa27.79■■■□□ 2.04
TRAF4-211ENST00000478021 GPR75-ASB3A0A0A6YYF3 556 aa27.79■■■□□ 2.04
TRAF4-211ENST00000478021 RGS3P49796 1198 aa27.79■■■□□ 2.04
TRAF4-211ENST00000478021 SPRYD7Q5W111 196 aa27.79■■■□□ 2.04
TRAF4-211ENST00000478021 ZFPM1Q8IX07 1006 aa27.79■■■□□ 2.04
TRAF4-211ENST00000478021 DOCK2Q92608 1830 aa27.78■■■□□ 2.04
TRAF4-211ENST00000478021 PICALMQ13492 652 aa27.78■■■□□ 2.04
TRAF4-211ENST00000478021 NAA16Q6N069 864 aaPredicted RBP27.78■■■□□ 2.04
TRAF4-211ENST00000478021 IDI2Q9BXS1 227 aa27.78■■■□□ 2.04
TRAF4-211ENST00000478021 ELP3Q9H9T3 547 aa27.78■■■□□ 2.04
TRAF4-211ENST00000478021 PRDM10Q9NQV6 1147 aa27.78■■■□□ 2.04
TRAF4-211ENST00000478021 PCDHB15Q9Y5E8 787 aa27.78■■■□□ 2.04
TRAF4-211ENST00000478021 CA12O43570 354 aa27.77■■■□□ 2.04
TRAF4-211ENST00000478021 SMARCA5O60264 1052 aaPredicted RBP27.77■■■□□ 2.04
TRAF4-211ENST00000478021 RHBDL3P58872 404 aa27.77■■■□□ 2.04
TRAF4-211ENST00000478021 MIGA2Q7L4E1 593 aa27.77■■■□□ 2.04
TRAF4-211ENST00000478021 WNK4Q96J92 1243 aa27.77■■■□□ 2.04
TRAF4-211ENST00000478021 ANTXR1Q9H6X2 564 aa27.77■■■□□ 2.04
TRAF4-211ENST00000478021 DDX4Q9NQI0 724 aaKnown RBP27.77■■■□□ 2.04
TRAF4-211ENST00000478021 WDHD1O75717 1129 aaPredicted RBP27.76■■■□□ 2.03
TRAF4-211ENST00000478021 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.76■■■□□ 2.03
TRAF4-211ENST00000478021 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.76■■■□□ 2.032e-6■□□□□ 8
TRAF4-211ENST00000478021 HOOK2Q96ED9 719 aa27.76■■■□□ 2.03
TRAF4-211ENST00000478021 LRRCC1Q9C099 1032 aa27.76■■■□□ 2.03
TRAF4-211ENST00000478021 RNF186Q9NXI6 227 aa27.76■■■□□ 2.03
TRAF4-211ENST00000478021 UNCXA6NJT0 531 aa27.75■■■□□ 2.03
TRAF4-211ENST00000478021 TRPA1O75762 1119 aa27.75■■■□□ 2.03
TRAF4-211ENST00000478021 IDH1O75874 414 aaKnown RBP27.75■■■□□ 2.03
TRAF4-211ENST00000478021 MAP3K9P80192 1104 aa27.75■■■□□ 2.03
TRAF4-211ENST00000478021 VGLL4Q14135 290 aa27.75■■■□□ 2.03
TRAF4-211ENST00000478021 DCAF15Q66K64 600 aa27.75■■■□□ 2.03
TRAF4-211ENST00000478021 WRNIP1Q96S55 665 aa27.75■■■□□ 2.03
TRAF4-211ENST00000478021 ENTPD3O75355 529 aa27.74■■■□□ 2.03
TRAF4-211ENST00000478021 GJA5P36382 358 aa27.74■■■□□ 2.03
TRAF4-211ENST00000478021 ADGRA1Q86SQ6 560 aa27.74■■■□□ 2.03
TRAF4-211ENST00000478021 ZSCAN29Q8IWY8 852 aaPredicted RBP27.74■■■□□ 2.03
TRAF4-211ENST00000478021 REM2Q8IYK8 340 aaPredicted RBP27.74■■■□□ 2.03
TRAF4-211ENST00000478021 CNKSR2Q8WXI2 1034 aa27.73■■■□□ 2.03
TRAF4-211ENST00000478021 NOL10Q9BSC4 688 aaKnown RBP27.73■■■□□ 2.03
TRAF4-211ENST00000478021 ZNF341Q9BYN7 854 aa27.73■■■□□ 2.03
TRAF4-211ENST00000478021 DCTPP1Q9H773 170 aa27.73■■■□□ 2.03
TRAF4-211ENST00000478021 AATFQ9NY61 560 aaKnown RBP eCLIP27.73■■■□□ 2.03
TRAF4-211ENST00000478021 CSADQ9Y600 493 aa27.73■■■□□ 2.03
TRAF4-211ENST00000478021 LAMB1P07942 1786 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms