RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 DDR1Q08345 913 aa9.23□□□□□ -0.93
USP33-208ENST00000477949 VAC14Q08AM6 782 aa9.23□□□□□ -0.93
USP33-208ENST00000477949 AIDAQ96BJ3 306 aa9.23□□□□□ -0.93
USP33-208ENST00000477949 ASAP1Q9ULH1 1129 aa9.23□□□□□ -0.93
USP33-208ENST00000477949 NRXN2Q9P2S2 1712 aa9.22□□□□□ -0.93
USP33-208ENST00000477949 ARAFP10398 606 aa9.22□□□□□ -0.93
USP33-208ENST00000477949 HOXB4P17483 251 aaPredicted RBP9.22□□□□□ -0.93
USP33-208ENST00000477949 LMNB1P20700 586 aa9.22□□□□□ -0.93
USP33-208ENST00000477949 SMTNP53814 917 aa9.22□□□□□ -0.93
USP33-208ENST00000477949 WASHC4Q2M389 1173 aa9.22□□□□□ -0.93
USP33-208ENST00000477949 RAPGEF4Q8WZA2 1011 aa9.22□□□□□ -0.93
USP33-208ENST00000477949 DICER1Q9UPY3 1922 aaKnown RBP9.22□□□□□ -0.93
USP33-208ENST00000477949 EPXP11678 715 aa9.21□□□□□ -0.94
USP33-208ENST00000477949 TATP17735 454 aaPredicted RBP9.21□□□□□ -0.94
USP33-208ENST00000477949 SLC12A5Q9H2X9 1139 aa9.21□□□□□ -0.94
USP33-208ENST00000477949 DNAAF2Q9NVR5 837 aaKnown RBP9.21□□□□□ -0.94
USP33-208ENST00000477949 RTCBQ9Y3I0 505 aaKnown RBP9.21□□□□□ -0.94
USP33-208ENST00000477949 PARP3Q9Y6F1 533 aa9.21□□□□□ -0.94
USP33-208ENST00000477949 CNTNAP4Q9C0A0 1308 aa9.21□□□□□ -0.94
USP33-208ENST00000477949 ADAMTSL1Q8N6G6 1762 aa9.21□□□□□ -0.94
USP33-208ENST00000477949 LTBP1Q14766 1721 aa9.2□□□□□ -0.94
USP33-208ENST00000477949 AFDNP55196 1824 aaKnown RBP9.2□□□□□ -0.94
USP33-208ENST00000477949 K7ELQ4 463 aaPredicted RBP9.2□□□□□ -0.94
USP33-208ENST00000477949 ATXN7O15265 892 aaPredicted RBP9.2□□□□□ -0.94
USP33-208ENST00000477949 RPS6KA4O75676 772 aa9.2□□□□□ -0.94
USP33-208ENST00000477949 TRAPPC3LQ5T215 181 aa9.2□□□□□ -0.94
USP33-208ENST00000477949 PLPP7Q8NBV4 271 aa9.2□□□□□ -0.94
USP33-208ENST00000477949 GDPD2Q9HCC8 539 aa9.2□□□□□ -0.94
USP33-208ENST00000477949 ATG3Q9NT62 314 aa9.2□□□□□ -0.94
USP33-208ENST00000477949 FER1L6Q2WGJ9 1857 aa9.19□□□□□ -0.94
USP33-208ENST00000477949 NEURL1BA8MQ27 555 aa9.19□□□□□ -0.94
USP33-208ENST00000477949 CDK2AP1O14519 115 aa9.19□□□□□ -0.94
USP33-208ENST00000477949 GNB5O14775 395 aa9.19□□□□□ -0.94
USP33-208ENST00000477949 ATP4AP20648 1035 aa9.19□□□□□ -0.94
USP33-208ENST00000477949 AMPHP49418 695 aa9.19□□□□□ -0.94
USP33-208ENST00000477949 SEMA3FQ13275 785 aa9.19□□□□□ -0.94
USP33-208ENST00000477949 GRIN2CQ14957 1233 aa9.19□□□□□ -0.94
USP33-208ENST00000477949 ARSJQ5FYB0 599 aaPredicted RBP9.19□□□□□ -0.94
USP33-208ENST00000477949 SUV39H2Q9H5I1 410 aa9.19□□□□□ -0.94
USP33-208ENST00000477949 INSRP06213 1382 aa9.19□□□□□ -0.94
USP33-208ENST00000477949 SMG6Q86US8 1419 aaKnown RBP9.19□□□□□ -0.94
USP33-208ENST00000477949 A0A1W2PNR3 127 aa9.18□□□□□ -0.94
USP33-208ENST00000477949 RASSF10A6NK89 507 aa9.18□□□□□ -0.94
USP33-208ENST00000477949 CCDC85CA6NKD9 419 aa9.18□□□□□ -0.94
USP33-208ENST00000477949 POLRMTO00411 1230 aaKnown RBP9.18□□□□□ -0.94
USP33-208ENST00000477949 SOX11P35716 441 aa9.18□□□□□ -0.94
USP33-208ENST00000477949 ABL2P42684 1182 aa9.18□□□□□ -0.94
USP33-208ENST00000477949 TNP2Q05952 138 aa9.18□□□□□ -0.94
USP33-208ENST00000477949 RRS1Q15050 365 aaKnown RBP9.18□□□□□ -0.94
USP33-208ENST00000477949 HDGFL2Q7Z4V5 671 aaPredicted RBP9.18□□□□□ -0.94
USP33-208ENST00000477949 PITPNM2Q9BZ72 1349 aa9.18□□□□□ -0.94
USP33-208ENST00000477949 USP42Q9H9J4 1324 aaKnown RBP9.18□□□□□ -0.94
USP33-208ENST00000477949 SRP68Q9UHB9 627 aaKnown RBP9.18□□□□□ -0.94
USP33-208ENST00000477949 SERTAD1Q9UHV2 236 aa9.18□□□□□ -0.94
USP33-208ENST00000477949 MAPTP10636 758 aaKnown RBP9.17□□□□□ -0.94
USP33-208ENST00000477949 TM4SF1P30408 202 aa9.17□□□□□ -0.94
USP33-208ENST00000477949 TJP1Q07157 1748 aa9.17□□□□□ -0.94
USP33-208ENST00000477949 A6NJY4 79 aa9.16□□□□□ -0.94
USP33-208ENST00000477949 TMEM88BA6NKF7 163 aa9.16□□□□□ -0.94
USP33-208ENST00000477949 DLL1O00548 723 aa9.16□□□□□ -0.94
USP33-208ENST00000477949 RFC4P35249 363 aa9.16□□□□□ -0.94
USP33-208ENST00000477949 MTFR1Q15390 333 aa9.16□□□□□ -0.94
USP33-208ENST00000477949 HSP90AB2PQ58FF8 381 aa9.16□□□□□ -0.94
USP33-208ENST00000477949 COG3Q96JB2 828 aa9.16□□□□□ -0.94
USP33-208ENST00000477949 AVENQ9NQS1 362 aaPredicted RBP9.16□□□□□ -0.94
USP33-208ENST00000477949 ZDHHC3Q9NYG2 299 aa9.16□□□□□ -0.94
USP33-208ENST00000477949 TMOD3Q9NYL9 352 aa9.16□□□□□ -0.94
USP33-208ENST00000477949 COL6A3P12111 3177 aa9.16□□□□□ -0.94
USP33-208ENST00000477949 ROCK2O75116 1388 aaKnown RBP9.15□□□□□ -0.94
USP33-208ENST00000477949 CARMIL3Q8ND23 1372 aa9.15□□□□□ -0.94
USP33-208ENST00000477949 TONSLQ96HA7 1378 aa9.15□□□□□ -0.94
USP33-208ENST00000477949 SCN4AP35499 1836 aa9.15□□□□□ -0.94
USP33-208ENST00000477949 COL11A2P13942 1736 aaPredicted RBP9.15□□□□□ -0.94
USP33-208ENST00000477949 ANKRD26Q9UPS8 1709 aa9.15□□□□□ -0.94
USP33-208ENST00000477949 TMEM229AB2RXF0 380 aa9.15□□□□□ -0.94
USP33-208ENST00000477949 ADH6P28332 368 aa9.15□□□□□ -0.94
USP33-208ENST00000477949 ZNF295-AS1Q8N0V1 137 aa9.15□□□□□ -0.94
USP33-208ENST00000477949 ZIC5Q96T25 663 aa9.15□□□□□ -0.94
USP33-208ENST00000477949 NOP53Q9NZM5 478 aaKnown RBP9.15□□□□□ -0.94
USP33-208ENST00000477949 KLF15Q9UIH9 416 aa9.15□□□□□ -0.94
USP33-208ENST00000477949 ANKRD31Q8N7Z5 1873 aa9.15□□□□□ -0.95
USP33-208ENST00000477949 WDR33Q9C0J8 1336 aaKnown RBP9.14□□□□□ -0.95
USP33-208ENST00000477949 KHNYNO15037 678 aaKnown RBP9.14□□□□□ -0.95
USP33-208ENST00000477949 DDNO94850 711 aaPredicted RBP9.14□□□□□ -0.95
USP33-208ENST00000477949 FURINP09958 794 aa9.14□□□□□ -0.95
USP33-208ENST00000477949 DGKGP49619 791 aa9.14□□□□□ -0.95
USP33-208ENST00000477949 MAP2K1Q02750 393 aaPredicted RBP9.14□□□□□ -0.95
USP33-208ENST00000477949 XP32Q5T750 250 aa9.14□□□□□ -0.95
USP33-208ENST00000477949 LDHDQ86WU2 507 aa9.14□□□□□ -0.95
USP33-208ENST00000477949 TMC1Q8TDI8 760 aa9.14□□□□□ -0.95
USP33-208ENST00000477949 TERF2IPQ9NYB0 399 aa9.14□□□□□ -0.95
USP33-208ENST00000477949 IQSEC3Q9UPP2 1182 aaPredicted RBP9.14□□□□□ -0.95
USP33-208ENST00000477949 GJA3Q9Y6H8 435 aa9.14□□□□□ -0.95
USP33-208ENST00000477949 FLT4P35916 1363 aa9.13□□□□□ -0.95
USP33-208ENST00000477949 KIF24Q5T7B8 1368 aa9.13□□□□□ -0.95
USP33-208ENST00000477949 LTBP3Q9NS15 1303 aa9.13□□□□□ -0.95
USP33-208ENST00000477949 DCDC2BA2VCK2 349 aa9.13□□□□□ -0.95
USP33-208ENST00000477949 C1QTNF9BB2RNN3 333 aa9.13□□□□□ -0.95
USP33-208ENST00000477949 PHKG2P15735 406 aa9.13□□□□□ -0.95
USP33-208ENST00000477949 CD33P20138 364 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms