RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 RGL3Q3MIN7 710 aa7.53□□□□□ -1.2
VPS45-207ENST00000477558 FBXO41Q8TF61 875 aa7.53□□□□□ -1.2
VPS45-207ENST00000477558 ASB16Q96NS5 453 aa7.53□□□□□ -1.2
VPS45-207ENST00000477558 CHRDQ9H2X0 955 aa7.53□□□□□ -1.2
VPS45-207ENST00000477558 FAM135BQ49AJ0 1406 aa7.53□□□□□ -1.2
VPS45-207ENST00000477558 YTHDC2Q9H6S0 1430 aaKnown RBP7.53□□□□□ -1.2
VPS45-207ENST00000477558 ELOA3CA0A087WX78 387 aaPredicted RBP7.52□□□□□ -1.2
VPS45-207ENST00000477558 ELOA3DA6NLF2 546 aaPredicted RBP7.52□□□□□ -1.2
VPS45-207ENST00000477558 DSC3Q14574 896 aa7.52□□□□□ -1.2
VPS45-207ENST00000477558 ELOA3BQ3SY89 546 aa7.52□□□□□ -1.2
VPS45-207ENST00000477558 USPL1Q5W0Q7 1092 aa7.52□□□□□ -1.2
VPS45-207ENST00000477558 DNAJC14Q6Y2X3 702 aaPredicted RBP7.52□□□□□ -1.2
VPS45-207ENST00000477558 ZSCAN29Q8IWY8 852 aaPredicted RBP7.52□□□□□ -1.2
VPS45-207ENST00000477558 ELOA3Q8NG57 546 aa7.52□□□□□ -1.2
VPS45-207ENST00000477558 TRPM4Q8TD43 1214 aa7.52□□□□□ -1.2
VPS45-207ENST00000477558 NSUN5Q96P11 429 aaKnown RBP7.52□□□□□ -1.2
VPS45-207ENST00000477558 ZFYVE28Q9HCC9 887 aa7.52□□□□□ -1.2
VPS45-207ENST00000477558 KANSL3Q9P2N6 904 aa7.52□□□□□ -1.2
VPS45-207ENST00000477558 GPRASP1Q5JY77 1395 aa7.52□□□□□ -1.21
VPS45-207ENST00000477558 ANKRD33BA6NCL7 494 aa7.52□□□□□ -1.21
VPS45-207ENST00000477558 EREGO14944 169 aa7.52□□□□□ -1.21
VPS45-207ENST00000477558 PHACTR2O75167 634 aa7.52□□□□□ -1.21
VPS45-207ENST00000477558 POLR3DP05423 398 aaPredicted RBP7.52□□□□□ -1.21
VPS45-207ENST00000477558 CES1P23141 567 aa7.52□□□□□ -1.21
VPS45-207ENST00000477558 PLCB3Q01970 1234 aa7.52□□□□□ -1.21
VPS45-207ENST00000477558 PLAURQ03405 335 aa7.52□□□□□ -1.21
VPS45-207ENST00000477558 BTBD6Q96KE9 485 aa7.52□□□□□ -1.21
VPS45-207ENST00000477558 DMRTB1Q96MA1 342 aa7.52□□□□□ -1.21
VPS45-207ENST00000477558 SIN3AQ96ST3 1273 aa7.52□□□□□ -1.21
VPS45-207ENST00000477558 PCGF6Q9BYE7 350 aa7.52□□□□□ -1.21
VPS45-207ENST00000477558 SLC6A14Q9UN76 642 aa7.52□□□□□ -1.21
VPS45-207ENST00000477558 AMOTL2Q9Y2J4 779 aa7.52□□□□□ -1.21
VPS45-207ENST00000477558 RALGAPBQ86X10 1494 aa7.51□□□□□ -1.21
VPS45-207ENST00000477558 LOC102724428A0A0B4J2F2 783 aa7.51□□□□□ -1.21
VPS45-207ENST00000477558 TREHO43280 583 aa7.51□□□□□ -1.21
VPS45-207ENST00000477558 CPB1P15086 417 aa7.51□□□□□ -1.21
VPS45-207ENST00000477558 NRLP54845 237 aa7.51□□□□□ -1.21
VPS45-207ENST00000477558 MFAP1P55081 439 aaKnown RBP7.51□□□□□ -1.21
VPS45-207ENST00000477558 SIK1P57059 783 aa7.51□□□□□ -1.21
VPS45-207ENST00000477558 SNX29Q8TEQ0 813 aa7.51□□□□□ -1.21
VPS45-207ENST00000477558 STARD13Q9Y3M8 1113 aa7.51□□□□□ -1.21
VPS45-207ENST00000477558 FMN2Q9NZ56 1722 aa7.51□□□□□ -1.21
VPS45-207ENST00000477558 ROBO1Q9Y6N7 1651 aa7.51□□□□□ -1.21
VPS45-207ENST00000477558 MST1RQ04912 1400 aa7.5□□□□□ -1.21
VPS45-207ENST00000477558 ALAS2P22557 587 aa7.5□□□□□ -1.21
VPS45-207ENST00000477558 SOX18P35713 384 aa7.5□□□□□ -1.21
VPS45-207ENST00000477558 GPLD1P80108 840 aa7.5□□□□□ -1.21
VPS45-207ENST00000477558 FAM35AQ86V20 835 aa7.5□□□□□ -1.21
VPS45-207ENST00000477558 DCAF11Q8TEB1 546 aa7.5□□□□□ -1.21
VPS45-207ENST00000477558 ALKBH8Q96BT7 664 aaKnown RBP7.5□□□□□ -1.21
VPS45-207ENST00000477558 ENAMQ9NRM1 1142 aa7.5□□□□□ -1.21
VPS45-207ENST00000477558 LRRC4BQ9NT99 713 aa7.5□□□□□ -1.21
VPS45-207ENST00000477558 SALL4Q9UJQ4 1053 aa7.5□□□□□ -1.21
VPS45-207ENST00000477558 NAGPAQ9UK23 515 aa7.5□□□□□ -1.21
VPS45-207ENST00000477558 NHSL1Q5SYE7 1610 aa7.5□□□□□ -1.21
VPS45-207ENST00000477558 AHDC1Q5TGY3 1603 aaPredicted RBP7.5□□□□□ -1.21
VPS45-207ENST00000477558 MSH6P52701 1360 aa7.49□□□□□ -1.21
VPS45-207ENST00000477558 PHF20L1A8MW92 1017 aa7.49□□□□□ -1.21
VPS45-207ENST00000477558 EIF1AYO14602 144 aaKnown RBP7.49□□□□□ -1.21
VPS45-207ENST00000477558 HOXD8P13378 290 aaPredicted RBP7.49□□□□□ -1.21
VPS45-207ENST00000477558 PERM1Q5SV97 790 aa7.49□□□□□ -1.21
VPS45-207ENST00000477558 CHSY3Q70JA7 882 aa7.49□□□□□ -1.21
VPS45-207ENST00000477558 CSRNP1Q96S65 589 aa7.49□□□□□ -1.21
VPS45-207ENST00000477558 COL16A1Q07092 1604 aaPredicted RBP7.48□□□□□ -1.21
VPS45-207ENST00000477558 USP32Q8NFA0 1604 aa7.48□□□□□ -1.21
VPS45-207ENST00000477558 PLEKHH1Q9ULM0 1364 aa7.48□□□□□ -1.21
VPS45-207ENST00000477558 TRPA1O75762 1119 aa7.48□□□□□ -1.21
VPS45-207ENST00000477558 ACPPP15309 386 aa7.48□□□□□ -1.21
VPS45-207ENST00000477558 AMPD1P23109 780 aa7.48□□□□□ -1.21
VPS45-207ENST00000477558 MAPK8P45983 427 aa7.48□□□□□ -1.21
VPS45-207ENST00000477558 HYAL2Q12891 473 aa7.48□□□□□ -1.21
VPS45-207ENST00000477558 C8orf86Q6ZUL3 223 aa7.48□□□□□ -1.21
VPS45-207ENST00000477558 NEDD1Q8NHV4 660 aa7.48□□□□□ -1.21
VPS45-207ENST00000477558 NUDT8Q8WV74 236 aa7.48□□□□□ -1.21
VPS45-207ENST00000477558 PMEPA1Q969W9 287 aa7.48□□□□□ -1.21
VPS45-207ENST00000477558 SETDB2Q96T68 719 aa7.48□□□□□ -1.21
VPS45-207ENST00000477558 WWC3Q9ULE0 1092 aa7.48□□□□□ -1.21
VPS45-207ENST00000477558 TOPAZ1Q8N9V7 1692 aa7.48□□□□□ -1.21
VPS45-207ENST00000477558 QRICH2Q9H0J4 1663 aa7.47□□□□□ -1.21
VPS45-207ENST00000477558 CPNE3O75131 537 aaKnown RBP7.47□□□□□ -1.21
VPS45-207ENST00000477558 KIF4AO95239 1232 aa7.47□□□□□ -1.21
VPS45-207ENST00000477558 ALBP02768 609 aa7.47□□□□□ -1.21
VPS45-207ENST00000477558 NEFLP07196 543 aa7.47□□□□□ -1.21
VPS45-207ENST00000477558 P4HBP07237 508 aaKnown RBP7.47□□□□□ -1.21
VPS45-207ENST00000477558 HOXB4P17483 251 aaPredicted RBP7.47□□□□□ -1.21
VPS45-207ENST00000477558 FMR1Q06787 632 aaKnown RBP eCLIP7.47□□□□□ -1.21
VPS45-207ENST00000477558 PCSK7Q16549 785 aa7.47□□□□□ -1.21
VPS45-207ENST00000477558 TMEM132EQ6IEE7 984 aa7.47□□□□□ -1.21
VPS45-207ENST00000477558 PSAPL1Q6NUJ1 521 aa7.47□□□□□ -1.21
VPS45-207ENST00000477558 NCAPG2Q86XI2 1143 aa7.47□□□□□ -1.21
VPS45-207ENST00000477558 NPAS4Q8IUM7 802 aa7.47□□□□□ -1.21
VPS45-207ENST00000477558 CEP120Q8N960 986 aa7.47□□□□□ -1.21
VPS45-207ENST00000477558 C19orf44Q9H6X5 657 aa7.47□□□□□ -1.21
VPS45-207ENST00000477558 LATS2Q9NRM7 1088 aa7.47□□□□□ -1.21
VPS45-207ENST00000477558 C1orf167Q5SNV9 1468 aa7.46□□□□□ -1.21
VPS45-207ENST00000477558 EIF2AK2P19525 551 aaKnown RBP7.46□□□□□ -1.21
VPS45-207ENST00000477558 ATP11AP98196 1134 aa7.46□□□□□ -1.21
VPS45-207ENST00000477558 ELMSAN1Q6PJG2 1045 aa7.46□□□□□ -1.21
VPS45-207ENST00000477558 C20orf204Q6ZNR8 217 aa7.46□□□□□ -1.21
VPS45-207ENST00000477558 MICALL1Q8N3F8 863 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms