RNA–Protein interactions for RNA: ENST00000477552.1

PTPRD-209, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 4

Gene PTPRD, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-209ENST00000477552 APPP05067 770 aa9.69□□□□□ -0.86
PTPRD-209ENST00000477552 CALM1P0DP23 149 aa9.69□□□□□ -0.86
PTPRD-209ENST00000477552 CALM2P0DP24 149 aa9.69□□□□□ -0.86
PTPRD-209ENST00000477552 CALM3P0DP25 149 aa9.69□□□□□ -0.86
PTPRD-209ENST00000477552 PDE6AP16499 860 aa9.69□□□□□ -0.86
PTPRD-209ENST00000477552 IFNAR1P17181 557 aa9.69□□□□□ -0.86
PTPRD-209ENST00000477552 U2AF2P26368 475 aaKnown RBP eCLIP9.69□□□□□ -0.86
PTPRD-209ENST00000477552 GTF2E1P29083 439 aaPredicted RBP9.69□□□□□ -0.86
PTPRD-209ENST00000477552 MCAMP43121 646 aa9.69□□□□□ -0.86
PTPRD-209ENST00000477552 NLRP12P59046 1061 aa9.69□□□□□ -0.86
PTPRD-209ENST00000477552 KIF23Q02241 960 aaPredicted RBP9.69□□□□□ -0.86
PTPRD-209ENST00000477552 SSRP1Q08945 709 aaKnown RBP9.69□□□□□ -0.86
PTPRD-209ENST00000477552 RILPL1Q5EBL4 403 aa9.69□□□□□ -0.86
PTPRD-209ENST00000477552 CCDC102BQ68D86 513 aa9.69□□□□□ -0.86
PTPRD-209ENST00000477552 MFSD6Q6ZSS7 791 aa9.69□□□□□ -0.86
PTPRD-209ENST00000477552 ZNF579Q8NAF0 562 aaKnown RBP9.69□□□□□ -0.86
PTPRD-209ENST00000477552 SPATA5Q8NB90 893 aa9.69□□□□□ -0.86
PTPRD-209ENST00000477552 STRBPQ96SI9 672 aaKnown RBP9.69□□□□□ -0.86
PTPRD-209ENST00000477552 OSBPL5Q9H0X9 879 aaPredicted RBP9.69□□□□□ -0.86
PTPRD-209ENST00000477552 DNAJC25Q9H1X3 360 aa9.69□□□□□ -0.86
PTPRD-209ENST00000477552 FOXP1Q9H334 677 aaPredicted RBP9.69□□□□□ -0.86
PTPRD-209ENST00000477552 TTC12Q9H892 705 aaPredicted RBP9.69□□□□□ -0.86
PTPRD-209ENST00000477552 ASAP1Q9ULH1 1129 aa9.69□□□□□ -0.86
PTPRD-209ENST00000477552 PCDHA7Q9UN72 937 aa9.69□□□□□ -0.86
PTPRD-209ENST00000477552 SLC12A7Q9Y666 1083 aa9.69□□□□□ -0.86
PTPRD-209ENST00000477552 IDH1O75874 414 aaKnown RBP9.68□□□□□ -0.86
PTPRD-209ENST00000477552 FDPSP14324 419 aaKnown RBP9.68□□□□□ -0.86
PTPRD-209ENST00000477552 ADORA1P30542 326 aa9.68□□□□□ -0.86
PTPRD-209ENST00000477552 EIF5P55010 431 aaKnown RBP9.68□□□□□ -0.86
PTPRD-209ENST00000477552 SEMA3FQ13275 785 aa9.68□□□□□ -0.86
PTPRD-209ENST00000477552 AKNAD1Q5T1N1 836 aa9.68□□□□□ -0.86
PTPRD-209ENST00000477552 FAM173BQ6P4H8 233 aa9.68□□□□□ -0.86
PTPRD-209ENST00000477552 APOA5Q6Q788 366 aa9.68□□□□□ -0.86
PTPRD-209ENST00000477552 OLFM4Q6UX06 510 aa9.68□□□□□ -0.86
PTPRD-209ENST00000477552 NFXL1Q6ZNB6 911 aa9.68□□□□□ -0.86
PTPRD-209ENST00000477552 CCDC186Q7Z3E2 898 aa9.68□□□□□ -0.86
PTPRD-209ENST00000477552 CERS3Q8IU89 383 aa9.68□□□□□ -0.86
PTPRD-209ENST00000477552 TRIML1Q8N9V2 468 aa9.68□□□□□ -0.86
PTPRD-209ENST00000477552 STAG1Q8WVM7 1258 aa9.68□□□□□ -0.86
PTPRD-209ENST00000477552 ALG1Q9BT22 464 aa9.68□□□□□ -0.86
PTPRD-209ENST00000477552 LRRC2Q9BYS8 371 aa9.68□□□□□ -0.86
PTPRD-209ENST00000477552 PUS7LQ9H0K6 701 aaKnown RBP9.68□□□□□ -0.86
PTPRD-209ENST00000477552 GREM2Q9H772 168 aa9.68□□□□□ -0.86
PTPRD-209ENST00000477552 CCDC87Q9NVE4 849 aa9.68□□□□□ -0.86
PTPRD-209ENST00000477552 BTG4Q9NY30 223 aa9.68□□□□□ -0.86
PTPRD-209ENST00000477552 ANAPC4Q9UJX5 808 aa9.68□□□□□ -0.86
PTPRD-209ENST00000477552 IQSEC3Q9UPP2 1182 aaPredicted RBP9.68□□□□□ -0.86
PTPRD-209ENST00000477552 HPS5Q9UPZ3 1129 aa9.68□□□□□ -0.86
PTPRD-209ENST00000477552 BCORQ6W2J9 1755 aa9.68□□□□□ -0.86
PTPRD-209ENST00000477552 PHLPP1O60346 1717 aa9.68□□□□□ -0.86
PTPRD-209ENST00000477552 KAT6BQ8WYB5 2073 aa9.67□□□□□ -0.86
PTPRD-209ENST00000477552 ZNF532Q9HCE3 1301 aa9.67□□□□□ -0.86
PTPRD-209ENST00000477552 TCRBV5S4A2TA0A5A2 114 aa9.67□□□□□ -0.86
PTPRD-209ENST00000477552 GOLGA8AA7E2F4 631 aa9.67□□□□□ -0.86
PTPRD-209ENST00000477552 ZNF202O95125 648 aa9.67□□□□□ -0.86
PTPRD-209ENST00000477552 DEXIO95424 95 aa9.67□□□□□ -0.86
PTPRD-209ENST00000477552 FMNL1O95466 1100 aaPredicted RBP9.67□□□□□ -0.86
PTPRD-209ENST00000477552 SYKP43405 635 aa9.67□□□□□ -0.86
PTPRD-209ENST00000477552 UBE4AQ14139 1066 aa9.67□□□□□ -0.86
PTPRD-209ENST00000477552 CCDC178Q5BJE1 867 aa9.67□□□□□ -0.86
PTPRD-209ENST00000477552 TMEM67Q5HYA8 995 aa9.67□□□□□ -0.86
PTPRD-209ENST00000477552 FCHSD1Q86WN1 690 aa9.67□□□□□ -0.86
PTPRD-209ENST00000477552 LRRC8AQ8IWT6 810 aa9.67□□□□□ -0.86
PTPRD-209ENST00000477552 NCOA5Q9HCD5 579 aaKnown RBP9.67□□□□□ -0.86
PTPRD-209ENST00000477552 RBM28Q9NW13 759 aaKnown RBP9.67□□□□□ -0.86
PTPRD-209ENST00000477552 ZNF330Q9Y3S2 320 aaPredicted RBP9.67□□□□□ -0.86
PTPRD-209ENST00000477552 NDUFB9Q9Y6M9 179 aa9.67□□□□□ -0.86
PTPRD-209ENST00000477552 DOT1LQ8TEK3 1739 aa9.67□□□□□ -0.86
PTPRD-209ENST00000477552 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.67□□□□□ -0.86
PTPRD-209ENST00000477552 MYH6P13533 1939 aa9.66□□□□□ -0.86
PTPRD-209ENST00000477552 PSDA5PKW4 1024 aaPredicted RBP9.66□□□□□ -0.86
PTPRD-209ENST00000477552 GOLGA6L9A6NEM1 432 aa9.66□□□□□ -0.86
PTPRD-209ENST00000477552 IFIT3O14879 490 aaKnown RBP9.66□□□□□ -0.86
PTPRD-209ENST00000477552 FOXP2O15409 715 aa9.66□□□□□ -0.86
PTPRD-209ENST00000477552 CTIFO43310 598 aaKnown RBP9.66□□□□□ -0.86
PTPRD-209ENST00000477552 PTGS1P23219 599 aa9.66□□□□□ -0.86
PTPRD-209ENST00000477552 ANTXR2P58335 489 aa9.66□□□□□ -0.86
PTPRD-209ENST00000477552 AKAP17AQ02040 695 aaKnown RBP9.66□□□□□ -0.86
PTPRD-209ENST00000477552 WTAPQ15007 396 aa9.66□□□□□ -0.86
PTPRD-209ENST00000477552 VPS37DQ86XT2 251 aa9.66□□□□□ -0.86
PTPRD-209ENST00000477552 IFNL3Q8IZI9 196 aa9.66□□□□□ -0.86
PTPRD-209ENST00000477552 KRI1Q8N9T8 703 aaKnown RBP9.66□□□□□ -0.86
PTPRD-209ENST00000477552 SPC24Q8NBT2 197 aa9.66□□□□□ -0.86
PTPRD-209ENST00000477552 IGDCC4Q8TDY8 1250 aa9.66□□□□□ -0.86
PTPRD-209ENST00000477552 ESR2Q92731 530 aa9.66□□□□□ -0.86
PTPRD-209ENST00000477552 FEZ1Q99689 392 aa9.66□□□□□ -0.86
PTPRD-209ENST00000477552 GTPBP4Q9BZE4 634 aaKnown RBP9.66□□□□□ -0.86
PTPRD-209ENST00000477552 BRMS1Q9HCU9 246 aa9.66□□□□□ -0.86
PTPRD-209ENST00000477552 TUBE1Q9UJT0 475 aa9.66□□□□□ -0.86
PTPRD-209ENST00000477552 HAND2P61296 217 aa9.65□□□□□ -0.86
PTPRD-209ENST00000477552 PTPN14Q15678 1187 aa9.65□□□□□ -0.86
PTPRD-209ENST00000477552 TPD52L1Q16890 204 aaPredicted RBP9.65□□□□□ -0.86
PTPRD-209ENST00000477552 CAVIN4Q5BKX8 364 aa9.65□□□□□ -0.86
PTPRD-209ENST00000477552 RESP18Q5W5W9 173 aa9.65□□□□□ -0.86
PTPRD-209ENST00000477552 KRT40Q6A162 431 aa9.65□□□□□ -0.86
PTPRD-209ENST00000477552 TTLL5Q6EMB2 1281 aa9.65□□□□□ -0.86
PTPRD-209ENST00000477552 ILDR1Q86SU0 546 aaPredicted RBP9.65□□□□□ -0.86
PTPRD-209ENST00000477552 NOSTRINQ8IVI9 506 aa9.65□□□□□ -0.86
PTPRD-209ENST00000477552 MLKLQ8NB16 471 aa9.65□□□□□ -0.86
PTPRD-209ENST00000477552 KIF18AQ8NI77 898 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms