RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 IGSF3O75054 1194 aa18.53■□□□□ 0.56
SEC13-215ENST00000477547 PDE6AP16499 860 aa18.53■□□□□ 0.56
SEC13-215ENST00000477547 RBM5P52756 815 aaKnown RBP eCLIP18.53■□□□□ 0.56
SEC13-215ENST00000477547 GSTO1P78417 241 aa18.53■□□□□ 0.56
SEC13-215ENST00000477547 HDLBPQ00341 1268 aaKnown RBP18.53■□□□□ 0.56
SEC13-215ENST00000477547 CFAP100Q494V2 611 aa18.53■□□□□ 0.56
SEC13-215ENST00000477547 SLF2Q8IX21 1173 aa18.53■□□□□ 0.56
SEC13-215ENST00000477547 TRPM4Q8TD43 1214 aa18.53■□□□□ 0.56
SEC13-215ENST00000477547 ZNF384Q8TF68 577 aa18.53■□□□□ 0.56
SEC13-215ENST00000477547 MYOZ2Q9NPC6 264 aa18.53■□□□□ 0.56
SEC13-215ENST00000477547 SERPINA10Q9UK55 444 aa18.53■□□□□ 0.56
SEC13-215ENST00000477547 DDX60LQ5H9U9 1706 aaKnown RBP18.53■□□□□ 0.56
SEC13-215ENST00000477547 MMP14P50281 582 aa18.52■□□□□ 0.56
SEC13-215ENST00000477547 GRM1Q13255 1194 aa18.52■□□□□ 0.56
SEC13-215ENST00000477547 TBC1D10BQ4KMP7 808 aaPredicted RBP18.52■□□□□ 0.56
SEC13-215ENST00000477547 SLC9C2Q5TAH2 1124 aa18.52■□□□□ 0.56
SEC13-215ENST00000477547 ZSCAN25Q6NSZ9 544 aa18.52■□□□□ 0.56
SEC13-215ENST00000477547 ADARB2Q9NS39 739 aaKnown RBP18.52■□□□□ 0.56
SEC13-215ENST00000477547 TSKSQ9UJT2 592 aa18.52■□□□□ 0.56
SEC13-215ENST00000477547 DAGLAQ9Y4D2 1042 aa18.52■□□□□ 0.56
SEC13-215ENST00000477547 GAKO14976 1311 aa18.52■□□□□ 0.56
SEC13-215ENST00000477547 EGFRP00533 1210 aa18.51■□□□□ 0.55
SEC13-215ENST00000477547 SDSP20132 328 aa18.51■□□□□ 0.55
SEC13-215ENST00000477547 CYP7A1P22680 504 aa18.51■□□□□ 0.55
SEC13-215ENST00000477547 ADD2P35612 726 aa18.51■□□□□ 0.55
SEC13-215ENST00000477547 RGS19P49795 217 aa18.51■□□□□ 0.55
SEC13-215ENST00000477547 DLGAP5Q15398 846 aa18.51■□□□□ 0.55
SEC13-215ENST00000477547 LRRFIP1Q32MZ4 808 aaKnown RBP18.51■□□□□ 0.55
SEC13-215ENST00000477547 BMP2KLQ5H9B9 411 aa18.51■□□□□ 0.55
SEC13-215ENST00000477547 HHIPL2Q6UWX4 724 aa18.51■□□□□ 0.55
SEC13-215ENST00000477547 PAXIP1Q6ZW49 1069 aaPredicted RBP18.51■□□□□ 0.55
SEC13-215ENST00000477547 SAMD7Q7Z3H4 446 aa18.51■□□□□ 0.55
SEC13-215ENST00000477547 PNMA8AQ86V59 439 aaPredicted RBP18.51■□□□□ 0.55
SEC13-215ENST00000477547 PCDHAC2Q9Y5I4 1007 aa18.51■□□□□ 0.55
SEC13-215ENST00000477547 LAMB1P07942 1786 aa18.51■□□□□ 0.55
SEC13-215ENST00000477547 ZNF532Q9HCE3 1301 aa18.51■□□□□ 0.55
SEC13-215ENST00000477547 MYH1P12882 1939 aa18.51■□□□□ 0.55
SEC13-215ENST00000477547 LDHCP07864 332 aa18.5■□□□□ 0.55
SEC13-215ENST00000477547 RBM26Q5T8P6 1007 aaKnown RBP18.5■□□□□ 0.55
SEC13-215ENST00000477547 TMED8Q6PL24 325 aaPredicted RBP18.5■□□□□ 0.55
SEC13-215ENST00000477547 ADGRA1Q86SQ6 560 aa18.5■□□□□ 0.55
SEC13-215ENST00000477547 CAPNS2Q96L46 248 aa18.5■□□□□ 0.55
SEC13-215ENST00000477547 ZDHHC15Q96MV8 337 aa18.5■□□□□ 0.55
SEC13-215ENST00000477547 BAZ2AQ9UIF9 1905 aaKnown RBP18.5■□□□□ 0.55
SEC13-215ENST00000477547 SPDYE2BA6NHP3 402 aa18.49■□□□□ 0.55
SEC13-215ENST00000477547 CHGBP05060 677 aa18.49■□□□□ 0.55
SEC13-215ENST00000477547 ZFYP08048 801 aaPredicted RBP18.49■□□□□ 0.55
SEC13-215ENST00000477547 SPDYE6P0CI01 402 aa18.49■□□□□ 0.55
SEC13-215ENST00000477547 BTDP43251 543 aa18.49■□□□□ 0.55
SEC13-215ENST00000477547 CYP4F22Q6NT55 531 aa18.49■□□□□ 0.55
SEC13-215ENST00000477547 MTMR14Q8NCE2 650 aa18.49■□□□□ 0.55
SEC13-215ENST00000477547 NOL10Q9BSC4 688 aaKnown RBP18.49■□□□□ 0.55
SEC13-215ENST00000477547 PCDH10Q9P2E7 1040 aa18.49■□□□□ 0.55
SEC13-215ENST00000477547 TCRBV5S4A2TA0A5A2 114 aa18.49■□□□□ 0.55
SEC13-215ENST00000477547 RNF113AO15541 343 aaKnown RBP18.49■□□□□ 0.55
SEC13-215ENST00000477547 UBE3CQ15386 1083 aa18.49■□□□□ 0.55
SEC13-215ENST00000477547 SLFNL1Q499Z3 407 aa18.49■□□□□ 0.55
SEC13-215ENST00000477547 APPBP2Q92624 585 aa18.49■□□□□ 0.55
SEC13-215ENST00000477547 THSD7BQ9C0I4 1608 aa18.48■□□□□ 0.55
SEC13-215ENST00000477547 WNT10BO00744 389 aa18.48■□□□□ 0.55
SEC13-215ENST00000477547 USP50Q70EL3 339 aaPredicted RBP18.48■□□□□ 0.55
SEC13-215ENST00000477547 MIGA1Q8NAN2 632 aa18.48■□□□□ 0.55
SEC13-215ENST00000477547 FAM163AQ96GL9 167 aaPredicted RBP18.48■□□□□ 0.55
SEC13-215ENST00000477547 ZBED3Q96IU2 234 aaPredicted RBP18.48■□□□□ 0.55
SEC13-215ENST00000477547 BEGAINQ9BUH8 593 aa18.48■□□□□ 0.55
SEC13-215ENST00000477547 MRIQ9BWK5 157 aa18.48■□□□□ 0.55
SEC13-215ENST00000477547 DIAPH3Q9NSV4 1193 aa18.48■□□□□ 0.55
SEC13-215ENST00000477547 LAMA4Q16363 1823 aa18.47■□□□□ 0.55
SEC13-215ENST00000477547 MYO1BO43795 1136 aa18.47■□□□□ 0.55
SEC13-215ENST00000477547 NBPF9Q3BBW0 867 aa18.47■□□□□ 0.55
SEC13-215ENST00000477547 APOBEC3HQ6NTF7 200 aaKnown RBP18.47■□□□□ 0.55
SEC13-215ENST00000477547 PRMT6Q96LA8 375 aaPredicted RBP18.47■□□□□ 0.55
SEC13-215ENST00000477547 AATFQ9NY61 560 aaKnown RBP eCLIP18.47■□□□□ 0.55
SEC13-215ENST00000477547 GGA3Q9NZ52 723 aa18.47■□□□□ 0.55
SEC13-215ENST00000477547 MYH8P13535 1937 aa18.46■□□□□ 0.55
SEC13-215ENST00000477547 GPR75-ASB3A0A0A6YYF3 556 aa18.46■□□□□ 0.55
SEC13-215ENST00000477547 CLRN2A0PK11 232 aa18.46■□□□□ 0.55
SEC13-215ENST00000477547 HIP1O00291 1037 aa18.46■□□□□ 0.55
SEC13-215ENST00000477547 TRAF5O00463 557 aa18.46■□□□□ 0.55
SEC13-215ENST00000477547 AOC2O75106 756 aa18.46■□□□□ 0.55
SEC13-215ENST00000477547 HIRAP54198 1017 aaPredicted RBP18.46■□□□□ 0.55
SEC13-215ENST00000477547 TICAM2Q86XR7 235 aa18.46■□□□□ 0.55
SEC13-215ENST00000477547 TDRD3Q9H7E2 651 aaKnown RBP18.46■□□□□ 0.55
SEC13-215ENST00000477547 TMOD2Q9NZR1 351 aa18.46■□□□□ 0.55
SEC13-215ENST00000477547 ASTN2O75129 1339 aaPredicted RBP18.45■□□□□ 0.54
SEC13-215ENST00000477547 A0A0D9SFI3 127 aa18.45■□□□□ 0.54
SEC13-215ENST00000477547 MAGEB6P1A0A0J9YX57 407 aa18.45■□□□□ 0.54
SEC13-215ENST00000477547 MBD4O95243 580 aa18.45■□□□□ 0.54
SEC13-215ENST00000477547 BAG3O95817 575 aa18.45■□□□□ 0.54
SEC13-215ENST00000477547 ECE1P42892 770 aa18.45■□□□□ 0.54
SEC13-215ENST00000477547 NMIQ13287 307 aaPredicted RBP18.45■□□□□ 0.54
SEC13-215ENST00000477547 SPDYE2Q495Y8 402 aa18.45■□□□□ 0.54
SEC13-215ENST00000477547 ZMYM1Q5SVZ6 1142 aa18.45■□□□□ 0.54
SEC13-215ENST00000477547 CST9Q5W186 159 aa18.45■□□□□ 0.54
SEC13-215ENST00000477547 TRPM7Q96QT4 1865 aa18.45■□□□□ 0.54
SEC13-215ENST00000477547 SIPA1L1O43166 1804 aa18.44■□□□□ 0.54
SEC13-215ENST00000477547 M0R2C6 588 aa18.44■□□□□ 0.54
SEC13-215ENST00000477547 PLCG2P16885 1265 aa18.44■□□□□ 0.54
SEC13-215ENST00000477547 DYNLL1P63167 89 aaKnown RBP18.44■□□□□ 0.54
SEC13-215ENST00000477547 CDC42EP5Q6NZY7 148 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms