RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 FAM43AQ8N2R8 423 aa14.15□□□□□ -0.14
HDLBP-236ENST00000477477 ZKSCAN4Q969J2 545 aaPredicted RBP14.15□□□□□ -0.14
HDLBP-236ENST00000477477 MEIS3Q99687 375 aa14.15□□□□□ -0.14
HDLBP-236ENST00000477477 EFCC1Q9HA90 598 aa14.15□□□□□ -0.14
HDLBP-236ENST00000477477 ZFYVE28Q9HCC9 887 aa14.15□□□□□ -0.14
HDLBP-236ENST00000477477 PTPN22Q9Y2R2 807 aa14.15□□□□□ -0.14
HDLBP-236ENST00000477477 ZBTB22O15209 634 aa14.14□□□□□ -0.15
HDLBP-236ENST00000477477 LDHBP07195 334 aaKnown RBP14.14□□□□□ -0.15
HDLBP-236ENST00000477477 CETPP11597 493 aa14.14□□□□□ -0.15
HDLBP-236ENST00000477477 CAP1Q01518 475 aa14.14□□□□□ -0.15
HDLBP-236ENST00000477477 CDC42EP5Q6NZY7 148 aa14.14□□□□□ -0.15
HDLBP-236ENST00000477477 FAM151AQ8WW52 585 aa14.14□□□□□ -0.15
HDLBP-236ENST00000477477 ZNF341Q9BYN7 854 aa14.14□□□□□ -0.15
HDLBP-236ENST00000477477 COPRSQ9NQ92 184 aa14.14□□□□□ -0.15
HDLBP-236ENST00000477477 DENND2AQ9ULE3 1009 aa14.14□□□□□ -0.15
HDLBP-236ENST00000477477 IRF6O14896 467 aa14.13□□□□□ -0.15
HDLBP-236ENST00000477477 NFIAQ12857 509 aa14.13□□□□□ -0.15
HDLBP-236ENST00000477477 PPIL2Q13356 520 aa14.13□□□□□ -0.15
HDLBP-236ENST00000477477 SNAPC2Q13487 334 aa14.13□□□□□ -0.15
HDLBP-236ENST00000477477 PRPF38BQ5VTL8 546 aaKnown RBP14.13□□□□□ -0.15
HDLBP-236ENST00000477477 INTS3Q68E01 1043 aaKnown RBP14.13□□□□□ -0.15
HDLBP-236ENST00000477477 MIGA2Q7L4E1 593 aa14.13□□□□□ -0.15
HDLBP-236ENST00000477477 ARHGAP45Q92619 1136 aa14.13□□□□□ -0.15
HDLBP-236ENST00000477477 ZCCHC17Q9NP64 241 aaKnown RBP14.13□□□□□ -0.15
HDLBP-236ENST00000477477 BTBD19C9JJ37 291 aa14.12□□□□□ -0.15
HDLBP-236ENST00000477477 ADORA1P30542 326 aa14.12□□□□□ -0.15
HDLBP-236ENST00000477477 INPP5BP32019 993 aa14.12□□□□□ -0.15
HDLBP-236ENST00000477477 TCP10Q12799 353 aa14.12□□□□□ -0.15
HDLBP-236ENST00000477477 CCDC102BQ68D86 513 aa14.12□□□□□ -0.15
HDLBP-236ENST00000477477 ARMC5Q96C12 935 aa14.12□□□□□ -0.15
HDLBP-236ENST00000477477 FAM198AQ9UFP1 575 aa14.12□□□□□ -0.15
HDLBP-236ENST00000477477 MYH13Q9UKX3 1938 aa14.11□□□□□ -0.15
HDLBP-236ENST00000477477 TLR2O60603 784 aa14.11□□□□□ -0.15
HDLBP-236ENST00000477477 WDHD1O75717 1129 aaPredicted RBP14.11□□□□□ -0.15
HDLBP-236ENST00000477477 GNAI3P08754 354 aa14.11□□□□□ -0.15
HDLBP-236ENST00000477477 PPATQ06203 517 aa14.11□□□□□ -0.15
HDLBP-236ENST00000477477 MTX1Q13505 466 aa14.11□□□□□ -0.15
HDLBP-236ENST00000477477 RASGRF1Q13972 1273 aa14.11□□□□□ -0.15
HDLBP-236ENST00000477477 ARHGEF6Q15052 776 aa14.11□□□□□ -0.15
HDLBP-236ENST00000477477 ZGPATQ8N5A5 531 aaKnown RBP14.11□□□□□ -0.15
HDLBP-236ENST00000477477 USP40Q9NVE5 1235 aa14.11□□□□□ -0.15
HDLBP-236ENST00000477477 ZNF112Q9UJU3 913 aa14.11□□□□□ -0.15
HDLBP-236ENST00000477477 GAKO14976 1311 aa14.11□□□□□ -0.15
HDLBP-236ENST00000477477 PDS5AQ29RF7 1337 aaKnown RBP14.11□□□□□ -0.15
HDLBP-236ENST00000477477 POTEFA5A3E0 1075 aa14.1□□□□□ -0.15
HDLBP-236ENST00000477477 SRGAP3O43295 1099 aa14.1□□□□□ -0.15
HDLBP-236ENST00000477477 NOL9Q5SY16 702 aaKnown RBP14.1□□□□□ -0.15
HDLBP-236ENST00000477477 RFX7Q2KHR2 1363 aa14.09□□□□□ -0.15
HDLBP-236ENST00000477477 CENPFP49454 3210 aa14.09□□□□□ -0.15
HDLBP-236ENST00000477477 A0A1B0GUL7 405 aa14.09□□□□□ -0.15
HDLBP-236ENST00000477477 TIMM10P62072 90 aa14.09□□□□□ -0.15
HDLBP-236ENST00000477477 TFCP2Q12800 502 aa14.09□□□□□ -0.15
HDLBP-236ENST00000477477 DZIP1Q86YF9 867 aaKnown RBP14.09□□□□□ -0.15
HDLBP-236ENST00000477477 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.09□□□□□ -0.15
HDLBP-236ENST00000477477 IDI2Q9BXS1 227 aa14.09□□□□□ -0.15
HDLBP-236ENST00000477477 KCNH4Q9UQ05 1017 aa14.09□□□□□ -0.15
HDLBP-236ENST00000477477 AKAP2Q9Y2D5 859 aa14.09□□□□□ -0.15
HDLBP-236ENST00000477477 ATRNL1Q5VV63 1379 aa14.09□□□□□ -0.15
HDLBP-236ENST00000477477 TRIM27P14373 513 aa14.08□□□□□ -0.16
HDLBP-236ENST00000477477 RGS3P49796 1198 aa14.08□□□□□ -0.16
HDLBP-236ENST00000477477 LACTBP83111 547 aaPredicted RBP14.08□□□□□ -0.16
HDLBP-236ENST00000477477 MVPQ14764 893 aaKnown RBP14.08□□□□□ -0.16
HDLBP-236ENST00000477477 ANKRD23Q86SG2 305 aa14.08□□□□□ -0.16
HDLBP-236ENST00000477477 ZFPM1Q8IX07 1006 aa14.08□□□□□ -0.16
HDLBP-236ENST00000477477 XAGE2Q96GT9 111 aa14.08□□□□□ -0.16
HDLBP-236ENST00000477477 ZNF333Q96JL9 665 aa14.08□□□□□ -0.16
HDLBP-236ENST00000477477 ABCF2Q9UG63 623 aa14.08□□□□□ -0.16
HDLBP-236ENST00000477477 PTCH2Q9Y6C5 1203 aa14.08□□□□□ -0.16
HDLBP-236ENST00000477477 IPO8O15397 1037 aaKnown RBP14.07□□□□□ -0.16
HDLBP-236ENST00000477477 ENTPD3O75355 529 aa14.07□□□□□ -0.16
HDLBP-236ENST00000477477 KIF22Q14807 665 aa14.07□□□□□ -0.16
HDLBP-236ENST00000477477 ATF7IPQ6VMQ6 1270 aa14.07□□□□□ -0.16
HDLBP-236ENST00000477477 SLF2Q8IX21 1173 aa14.07□□□□□ -0.16
HDLBP-236ENST00000477477 FAM163AQ96GL9 167 aaPredicted RBP14.07□□□□□ -0.16
HDLBP-236ENST00000477477 ARHGAP39Q9C0H5 1083 aa14.07□□□□□ -0.16
HDLBP-236ENST00000477477 TNNQ9UQP3 1299 aa14.07□□□□□ -0.16
HDLBP-236ENST00000477477 MKI67P46013 3256 aaKnown RBP14.07□□□□□ -0.16
HDLBP-236ENST00000477477 BRCA2P51587 3418 aa14.06□□□□□ -0.16
HDLBP-236ENST00000477477 PDHXO00330 501 aa14.06□□□□□ -0.16
HDLBP-236ENST00000477477 GNAI2P04899 355 aa14.06□□□□□ -0.16
HDLBP-236ENST00000477477 BTDP43251 543 aa14.06□□□□□ -0.16
HDLBP-236ENST00000477477 MOGSQ13724 837 aa14.06□□□□□ -0.16
HDLBP-236ENST00000477477 SLC9C1Q4G0N8 1177 aa14.06□□□□□ -0.16
HDLBP-236ENST00000477477 SPTY2D1Q68D10 685 aaPredicted RBP14.06□□□□□ -0.16
HDLBP-236ENST00000477477 C17orf99Q6UX52 265 aa14.06□□□□□ -0.16
HDLBP-236ENST00000477477 SH3BP5LQ7L8J4 393 aa14.06□□□□□ -0.16
HDLBP-236ENST00000477477 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.06□□□□□ -0.16
HDLBP-236ENST00000477477 MROH7-TTC4A0A0A0MT08 1334 aa14.06□□□□□ -0.16
HDLBP-236ENST00000477477 ADGRA2Q96PE1 1338 aa14.06□□□□□ -0.16
HDLBP-236ENST00000477477 RBBP6Q7Z6E9 1792 aaKnown RBP14.05□□□□□ -0.16
HDLBP-236ENST00000477477 PHF20L1A8MW92 1017 aa14.05□□□□□ -0.16
HDLBP-236ENST00000477477 BCAR3O75815 825 aa14.05□□□□□ -0.16
HDLBP-236ENST00000477477 GNRH1P01148 92 aa14.05□□□□□ -0.16
HDLBP-236ENST00000477477 EN2P19622 333 aaPredicted RBP14.05□□□□□ -0.16
HDLBP-236ENST00000477477 ERICH6Q7L0X2 663 aa14.05□□□□□ -0.16
HDLBP-236ENST00000477477 NBPF11Q86T75 865 aa14.05□□□□□ -0.16
HDLBP-236ENST00000477477 ZSCAN29Q8IWY8 852 aaPredicted RBP14.05□□□□□ -0.16
HDLBP-236ENST00000477477 SCYL3Q8IZE3 742 aa14.05□□□□□ -0.16
HDLBP-236ENST00000477477 FRAT1Q92837 279 aaPredicted RBP14.05□□□□□ -0.16
HDLBP-236ENST00000477477 TMEM106CQ9BVX2 250 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms