RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 KSR2Q6VAB6 950 aa17.55■□□□□ 0.4
CLSTN1-205ENST00000477264 RGS22Q8NE09 1264 aa17.55■□□□□ 0.4
CLSTN1-205ENST00000477264 POLR3EQ9NVU0 708 aa17.55■□□□□ 0.4
CLSTN1-205ENST00000477264 MKRN1Q9UHC7 482 aaKnown RBP17.55■□□□□ 0.4
CLSTN1-205ENST00000477264 UTYO14607 1347 aa17.54■□□□□ 0.4
CLSTN1-205ENST00000477264 MAGEA9P43362 315 aa17.54■□□□□ 0.4
CLSTN1-205ENST00000477264 GNL2Q13823 731 aaKnown RBP17.54■□□□□ 0.4
CLSTN1-205ENST00000477264 TUBB2AQ13885 445 aa17.54■□□□□ 0.4
CLSTN1-205ENST00000477264 LONRF2Q1L5Z9 754 aa17.54■□□□□ 0.4
CLSTN1-205ENST00000477264 CCDC34Q96HJ3 373 aa17.54■□□□□ 0.4
CLSTN1-205ENST00000477264 TUBB2BQ9BVA1 445 aa17.54■□□□□ 0.4
CLSTN1-205ENST00000477264 TEX13AQ9BXU3 409 aaPredicted RBP17.54■□□□□ 0.4
CLSTN1-205ENST00000477264 PARD6BQ9BYG5 372 aa17.54■□□□□ 0.4
CLSTN1-205ENST00000477264 A0A087WWV3 80 aa17.53■□□□□ 0.4
CLSTN1-205ENST00000477264 SASH1O94885 1247 aa17.53■□□□□ 0.4
CLSTN1-205ENST00000477264 TOP1P11387 765 aaKnown RBP17.53■□□□□ 0.4
CLSTN1-205ENST00000477264 NDUFA8P51970 172 aa17.53■□□□□ 0.4
CLSTN1-205ENST00000477264 UBASH3AP57075 661 aa17.53■□□□□ 0.4
CLSTN1-205ENST00000477264 MYL5Q02045 173 aa17.53■□□□□ 0.4
CLSTN1-205ENST00000477264 MAPK8IP2Q13387 824 aaPredicted RBP17.53■□□□□ 0.4
CLSTN1-205ENST00000477264 STK38Q15208 465 aa17.53■□□□□ 0.4
CLSTN1-205ENST00000477264 DHX32Q7L7V1 743 aaKnown RBP17.53■□□□□ 0.4
CLSTN1-205ENST00000477264 TICAM2Q86XR7 235 aa17.53■□□□□ 0.4
CLSTN1-205ENST00000477264 LINC00301Q8NCQ3 95 aa17.53■□□□□ 0.4
CLSTN1-205ENST00000477264 PA2G4Q9UQ80 394 aaKnown RBP17.53■□□□□ 0.4
CLSTN1-205ENST00000477264 MAP3K2Q9Y2U5 619 aa17.53■□□□□ 0.4
CLSTN1-205ENST00000477264 CARMIL3Q8ND23 1372 aa17.53■□□□□ 0.4
CLSTN1-205ENST00000477264 ERLIN1O75477 346 aa17.53■□□□□ 0.4
CLSTN1-205ENST00000477264 SF3A1Q15459 793 aaKnown RBP17.53■□□□□ 0.4
CLSTN1-205ENST00000477264 UTP14AQ9BVJ6 771 aaKnown RBP17.53■□□□□ 0.4
CLSTN1-205ENST00000477264 BOLA2Q9H3K6 86 aa17.53■□□□□ 0.4
CLSTN1-205ENST00000477264 FANCGO15287 622 aa17.52■□□□□ 0.4
CLSTN1-205ENST00000477264 CTDNEP1O95476 244 aa17.52■□□□□ 0.4
CLSTN1-205ENST00000477264 USP5P45974 858 aa17.52■□□□□ 0.4
CLSTN1-205ENST00000477264 GTF2A1P52655 376 aaPredicted RBP17.52■□□□□ 0.4
CLSTN1-205ENST00000477264 BRAPQ7Z569 592 aa17.52■□□□□ 0.4
CLSTN1-205ENST00000477264 RIC3Q7Z5B4 369 aa17.52■□□□□ 0.4
CLSTN1-205ENST00000477264 GJD4Q96KN9 370 aaPredicted RBP17.52■□□□□ 0.4
CLSTN1-205ENST00000477264 A0A1B0GVL5 298 aa17.52■□□□□ 0.39
CLSTN1-205ENST00000477264 STX10O60499 249 aa17.52■□□□□ 0.39
CLSTN1-205ENST00000477264 TTC31Q49AM3 519 aaPredicted RBP17.52■□□□□ 0.39
CLSTN1-205ENST00000477264 COPS6Q7L5N1 327 aa17.52■□□□□ 0.39
CLSTN1-205ENST00000477264 HDXQ7Z353 690 aa17.52■□□□□ 0.39
CLSTN1-205ENST00000477264 ZNF274Q96GC6 653 aaPredicted RBP17.52■□□□□ 0.39
CLSTN1-205ENST00000477264 ACSBG1Q96GR2 724 aa17.52■□□□□ 0.39
CLSTN1-205ENST00000477264 ZCCHC17Q9NP64 241 aaKnown RBP17.52■□□□□ 0.39
CLSTN1-205ENST00000477264 LCMT1Q9UIC8 334 aa17.52■□□□□ 0.39
CLSTN1-205ENST00000477264 TRPC5Q9UL62 973 aaPredicted RBP17.52■□□□□ 0.39
CLSTN1-205ENST00000477264 DDX60Q8IY21 1712 aaKnown RBP17.51■□□□□ 0.39
CLSTN1-205ENST00000477264 ZNF609O15014 1411 aa17.51■□□□□ 0.39
CLSTN1-205ENST00000477264 TRIM66O15016 1216 aa17.51■□□□□ 0.39
CLSTN1-205ENST00000477264 SERPINC1P01008 464 aa17.51■□□□□ 0.39
CLSTN1-205ENST00000477264 TUBBP07437 444 aa17.51■□□□□ 0.39
CLSTN1-205ENST00000477264 LMOD1P29536 600 aaPredicted RBP17.51■□□□□ 0.39
CLSTN1-205ENST00000477264 GNG11P61952 73 aa17.51■□□□□ 0.39
CLSTN1-205ENST00000477264 TMEM139Q8IV31 216 aa17.51■□□□□ 0.39
CLSTN1-205ENST00000477264 XAGE3Q8WTP9 111 aa17.51■□□□□ 0.39
CLSTN1-205ENST00000477264 TUBE1Q9UJT0 475 aa17.51■□□□□ 0.39
CLSTN1-205ENST00000477264 CYP21A2P08686 494 aa17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 ATP5JP18859 108 aa17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 PIP4K2AP48426 406 aaPredicted RBP17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 APOBRQ0VD83 1088 aa17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 FBXW7Q969H0 707 aa17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 KIFC2Q96AC6 838 aa17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 GBP3Q9H0R5 595 aa17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 CCDC8Q9H0W5 538 aaPredicted RBP17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 ACBD3Q9H3P7 528 aa17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 SH3TC1Q8TE82 1336 aa17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 COL15A1P39059 1388 aa17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 H3BQF6 201 aa17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 SPTLC2O15270 562 aa17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 ZNF202O95125 648 aa17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 STARD3NLO95772 234 aa17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 CMA1P23946 247 aa17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 CFAP100Q494V2 611 aa17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 CEP112Q8N8E3 955 aa17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 PPM1EQ8WY54 764 aa17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 RAB21Q9UL25 225 aa17.5■□□□□ 0.39
CLSTN1-205ENST00000477264 NEXNQ0ZGT2 675 aa17.49■□□□□ 0.39
CLSTN1-205ENST00000477264 MSANTD4Q8NCY6 345 aa17.49■□□□□ 0.39
CLSTN1-205ENST00000477264 HSD3B7Q9H2F3 369 aa17.49■□□□□ 0.39
CLSTN1-205ENST00000477264 SPEF2Q9C093 1822 aa17.49■□□□□ 0.39
CLSTN1-205ENST00000477264 MCMDC2Q4G0Z9 681 aa17.49■□□□□ 0.39
CLSTN1-205ENST00000477264 ANKRD13DQ6ZTN6 518 aa17.49■□□□□ 0.39
CLSTN1-205ENST00000477264 SRGAP1Q7Z6B7 1085 aa17.49■□□□□ 0.39
CLSTN1-205ENST00000477264 ERCC4Q92889 916 aaPredicted RBP17.49■□□□□ 0.39
CLSTN1-205ENST00000477264 BAG1Q99933 345 aaPredicted RBP17.49■□□□□ 0.39
CLSTN1-205ENST00000477264 TLR7Q9NYK1 1049 aaKnown RBP17.49■□□□□ 0.39
CLSTN1-205ENST00000477264 GRM8O00222 908 aa17.48■□□□□ 0.39
CLSTN1-205ENST00000477264 A1BGP04217 495 aa17.48■□□□□ 0.39
CLSTN1-205ENST00000477264 TBX2Q13207 712 aaPredicted RBP17.48■□□□□ 0.39
CLSTN1-205ENST00000477264 FBXL16Q8N461 479 aa17.48■□□□□ 0.39
CLSTN1-205ENST00000477264 LINS1Q8NG48 757 aa17.48■□□□□ 0.39
CLSTN1-205ENST00000477264 THSD7AQ9UPZ6 1657 aa17.48■□□□□ 0.39
CLSTN1-205ENST00000477264 EXOSC10Q01780 885 aaKnown RBP17.47■□□□□ 0.39
CLSTN1-205ENST00000477264 LRP10Q7Z4F1 713 aa17.47■□□□□ 0.39
CLSTN1-205ENST00000477264 FAM71BQ8TC56 605 aa17.47■□□□□ 0.39
CLSTN1-205ENST00000477264 WDR24Q96S15 920 aa17.47■□□□□ 0.39
CLSTN1-205ENST00000477264 DSCC1Q9BVC3 393 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms