RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 CCDC184Q52MB2 194 aa20.79■□□□□ 0.92
APOBEC3F-203ENST00000476513 DCAF15Q66K64 600 aa20.79■□□□□ 0.92
APOBEC3F-203ENST00000476513 MIGA2Q7L4E1 593 aa20.79■□□□□ 0.92
APOBEC3F-203ENST00000476513 KAZALD1Q96I82 304 aa20.79■□□□□ 0.92
APOBEC3F-203ENST00000476513 SUCLG2Q96I99 432 aa20.79■□□□□ 0.92
APOBEC3F-203ENST00000476513 ZNF341Q9BYN7 854 aa20.79■□□□□ 0.92
APOBEC3F-203ENST00000476513 RPAP1Q9BWH6 1393 aaPredicted RBP20.78■□□□□ 0.92
APOBEC3F-203ENST00000476513 FRAT2O75474 233 aaPredicted RBP20.78■□□□□ 0.92
APOBEC3F-203ENST00000476513 HTATIP2Q9BUP3 242 aa20.78■□□□□ 0.92
APOBEC3F-203ENST00000476513 MYPNQ86TC9 1320 aa20.78■□□□□ 0.92
APOBEC3F-203ENST00000476513 CACNA1FO60840 1977 aa20.77■□□□□ 0.92
APOBEC3F-203ENST00000476513 ALDH1L1O75891 902 aa20.77■□□□□ 0.92
APOBEC3F-203ENST00000476513 NCBP3Q53F19 620 aaKnown RBP20.77■□□□□ 0.92
APOBEC3F-203ENST00000476513 CAVIN4Q5BKX8 364 aa20.77■□□□□ 0.92
APOBEC3F-203ENST00000476513 RNF208Q9H0X6 261 aa20.77■□□□□ 0.92
APOBEC3F-203ENST00000476513 KCNH4Q9UQ05 1017 aa20.77■□□□□ 0.92
APOBEC3F-203ENST00000476513 MOGSQ13724 837 aa20.76■□□□□ 0.91
APOBEC3F-203ENST00000476513 LRRC24Q50LG9 513 aa20.76■□□□□ 0.91
APOBEC3F-203ENST00000476513 BIN2Q9UBW5 565 aaPredicted RBP20.76■□□□□ 0.91
APOBEC3F-203ENST00000476513 BCAMP50895 628 aa20.75■□□□□ 0.91
APOBEC3F-203ENST00000476513 SLC4A10Q6U841 1118 aa20.75■□□□□ 0.91
APOBEC3F-203ENST00000476513 HHIPL2Q6UWX4 724 aa20.75■□□□□ 0.91
APOBEC3F-203ENST00000476513 SRCIN1Q9C0H9 1055 aa20.75■□□□□ 0.91
APOBEC3F-203ENST00000476513 ZNF112Q9UJU3 913 aa20.75■□□□□ 0.91
APOBEC3F-203ENST00000476513 SUGT1Q9Y2Z0 365 aa20.75■□□□□ 0.91
APOBEC3F-203ENST00000476513 NR2E3Q9Y5X4 410 aa20.75■□□□□ 0.91
APOBEC3F-203ENST00000476513 RANBP2P49792 3224 aaKnown RBP20.75■□□□□ 0.91
APOBEC3F-203ENST00000476513 MAST3O60307 1309 aa20.75■□□□□ 0.91
APOBEC3F-203ENST00000476513 ZBTB7BO15156 539 aaPredicted RBP20.74■□□□□ 0.91
APOBEC3F-203ENST00000476513 UBXN2AP68543 259 aa20.74■□□□□ 0.91
APOBEC3F-203ENST00000476513 PRKCZQ05513 592 aa20.74■□□□□ 0.91
APOBEC3F-203ENST00000476513 METTL24Q5JXM2 366 aa20.74■□□□□ 0.91
APOBEC3F-203ENST00000476513 VGLL2Q8N8G2 317 aa20.74■□□□□ 0.91
APOBEC3F-203ENST00000476513 FARP2O94887 1054 aaPredicted RBP20.73■□□□□ 0.91
APOBEC3F-203ENST00000476513 NBPF7P0C2Y1 421 aaPredicted RBP20.73■□□□□ 0.91
APOBEC3F-203ENST00000476513 WDR63Q8IWG1 891 aa20.73■□□□□ 0.91
APOBEC3F-203ENST00000476513 U2AF1L4Q8WU68 220 aaKnown RBP20.73■□□□□ 0.91
APOBEC3F-203ENST00000476513 FAM151AQ8WW52 585 aa20.73■□□□□ 0.91
APOBEC3F-203ENST00000476513 DLL1O00548 723 aa20.72■□□□□ 0.91
APOBEC3F-203ENST00000476513 PDE8BO95263 885 aa20.72■□□□□ 0.91
APOBEC3F-203ENST00000476513 BCRP11274 1271 aa20.72■□□□□ 0.91
APOBEC3F-203ENST00000476513 FCGRTP55899 365 aa20.72■□□□□ 0.91
APOBEC3F-203ENST00000476513 SLC17A8Q8NDX2 589 aa20.72■□□□□ 0.91
APOBEC3F-203ENST00000476513 PARK7Q99497 189 aaKnown RBP20.72■□□□□ 0.91
APOBEC3F-203ENST00000476513 UNC93B1Q9H1C4 597 aa20.72■□□□□ 0.91
APOBEC3F-203ENST00000476513 BICC1Q9H694 974 aaKnown RBP20.72■□□□□ 0.91
APOBEC3F-203ENST00000476513 CYP2C8P10632 490 aa20.71■□□□□ 0.91
APOBEC3F-203ENST00000476513 RABL6Q3YEC7 729 aaPredicted RBP20.71■□□□□ 0.91
APOBEC3F-203ENST00000476513 NOL9Q5SY16 702 aaKnown RBP20.71■□□□□ 0.91
APOBEC3F-203ENST00000476513 GPAT2Q6NUI2 795 aa20.71■□□□□ 0.91
APOBEC3F-203ENST00000476513 SLAIN1Q8ND83 568 aa20.71■□□□□ 0.91
APOBEC3F-203ENST00000476513 GABRQQ9UN88 632 aa20.71■□□□□ 0.91
APOBEC3F-203ENST00000476513 SALL2Q9Y467 1007 aaPredicted RBP20.71■□□□□ 0.91
APOBEC3F-203ENST00000476513 UTYO14607 1347 aa20.71■□□□□ 0.91
APOBEC3F-203ENST00000476513 SGPL1O95470 568 aa20.7■□□□□ 0.9
APOBEC3F-203ENST00000476513 TCP10Q12799 353 aa20.7■□□□□ 0.9
APOBEC3F-203ENST00000476513 ANKRD44Q8N8A2 993 aa20.7■□□□□ 0.9
APOBEC3F-203ENST00000476513 CXCL11O14625 94 aa20.69■□□□□ 0.9
APOBEC3F-203ENST00000476513 CDC42EP5Q6NZY7 148 aa20.69■□□□□ 0.9
APOBEC3F-203ENST00000476513 SPINK5Q9NQ38 1064 aaPredicted RBP20.69■□□□□ 0.9
APOBEC3F-203ENST00000476513 DAGLAQ9Y4D2 1042 aa20.69■□□□□ 0.9
APOBEC3F-203ENST00000476513 KIF16BQ96L93 1317 aa20.69■□□□□ 0.9
APOBEC3F-203ENST00000476513 A0A1W2PPC1 479 aa20.68■□□□□ 0.9
APOBEC3F-203ENST00000476513 SOX1O00570 391 aaPredicted RBP20.68■□□□□ 0.9
APOBEC3F-203ENST00000476513 ADCY3O60266 1144 aa20.68■□□□□ 0.9
APOBEC3F-203ENST00000476513 FGFR2P21802 821 aa20.68■□□□□ 0.9
APOBEC3F-203ENST00000476513 NFIAQ12857 509 aa20.68■□□□□ 0.9
APOBEC3F-203ENST00000476513 KLHDC4Q8TBB5 520 aa20.68■□□□□ 0.9
APOBEC3F-203ENST00000476513 EVI5O60447 810 aa20.67■□□□□ 0.9
APOBEC3F-203ENST00000476513 IFIT1P09914 478 aaKnown RBP20.67■□□□□ 0.9
APOBEC3F-203ENST00000476513 PUM3Q15397 648 aaKnown RBP20.67■□□□□ 0.9
APOBEC3F-203ENST00000476513 ELNP15502 786 aa20.66■□□□□ 0.9
APOBEC3F-203ENST00000476513 FLT3LGP49771 235 aa20.66■□□□□ 0.9
APOBEC3F-203ENST00000476513 DIXDC1Q155Q3 683 aa20.66■□□□□ 0.9
APOBEC3F-203ENST00000476513 WDR66Q8TBY9 1149 aa20.66■□□□□ 0.9
APOBEC3F-203ENST00000476513 LRCH3Q96II8 777 aa20.66■□□□□ 0.9
APOBEC3F-203ENST00000476513 FAM198AQ9UFP1 575 aa20.66■□□□□ 0.9
APOBEC3F-203ENST00000476513 TFRCP02786 760 aaKnown RBP20.65■□□□□ 0.9
APOBEC3F-203ENST00000476513 INHAP05111 366 aa20.65■□□□□ 0.9
APOBEC3F-203ENST00000476513 ZFPM1Q8IX07 1006 aa20.65■□□□□ 0.9
APOBEC3F-203ENST00000476513 STAP2Q9UGK3 403 aa20.65■□□□□ 0.9
APOBEC3F-203ENST00000476513 A0A0G2JLL6 359 aaPredicted RBP20.64■□□□□ 0.89
APOBEC3F-203ENST00000476513 FASTKD5Q7L8L6 764 aaKnown RBP20.64■□□□□ 0.89
APOBEC3F-203ENST00000476513 PRRT2Q7Z6L0 340 aaPredicted RBP20.64■□□□□ 0.89
APOBEC3F-203ENST00000476513 PXYLP1Q8TE99 480 aa20.64■□□□□ 0.89
APOBEC3F-203ENST00000476513 DEFB118Q96PH6 123 aa20.64■□□□□ 0.89
APOBEC3F-203ENST00000476513 ZHX2Q9Y6X8 837 aa20.64■□□□□ 0.89
APOBEC3F-203ENST00000476513 PHF20L1A8MW92 1017 aa20.63■□□□□ 0.89
APOBEC3F-203ENST00000476513 PRDX5P30044 214 aa20.63■□□□□ 0.89
APOBEC3F-203ENST00000476513 SCYL3Q8IZE3 742 aa20.63■□□□□ 0.89
APOBEC3F-203ENST00000476513 USP40Q9NVE5 1235 aa20.63■□□□□ 0.89
APOBEC3F-203ENST00000476513 ATRNL1Q5VV63 1379 aa20.62■□□□□ 0.89
APOBEC3F-203ENST00000476513 SLC5A1P13866 664 aa20.62■□□□□ 0.89
APOBEC3F-203ENST00000476513 CAPN2P17655 700 aa20.62■□□□□ 0.89
APOBEC3F-203ENST00000476513 PTPRAP18433 802 aa20.62■□□□□ 0.89
APOBEC3F-203ENST00000476513 ZEB1P37275 1124 aaPredicted RBP20.62■□□□□ 0.89
APOBEC3F-203ENST00000476513 IRF5Q13568 498 aa20.62■□□□□ 0.89
APOBEC3F-203ENST00000476513 GADL1Q6ZQY3 521 aa20.62■□□□□ 0.89
APOBEC3F-203ENST00000476513 LPIN2Q92539 896 aa20.62■□□□□ 0.89
APOBEC3F-203ENST00000476513 PAK6Q9NQU5 681 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms