RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 MROH7-TTC4A0A0A0MT08 1334 aa25.58■■□□□ 1.69
MAP1LC3A-204ENST00000476428 GPR75-ASB3A0A0A6YYF3 556 aa25.57■■□□□ 1.68
MAP1LC3A-204ENST00000476428 FKBP1CQ5VVH2 108 aa25.57■■□□□ 1.68
MAP1LC3A-204ENST00000476428 PRDM10Q9NQV6 1147 aa25.57■■□□□ 1.68
MAP1LC3A-204ENST00000476428 CNTNAP1P78357 1384 aa25.56■■□□□ 1.68
MAP1LC3A-204ENST00000476428 IGSF3O75054 1194 aa25.56■■□□□ 1.68
MAP1LC3A-204ENST00000476428 NF2P35240 595 aa25.56■■□□□ 1.68
MAP1LC3A-204ENST00000476428 BTDP43251 543 aa25.56■■□□□ 1.68
MAP1LC3A-204ENST00000476428 TNNI2P48788 182 aa25.56■■□□□ 1.68
MAP1LC3A-204ENST00000476428 NAA16Q6N069 864 aaPredicted RBP25.56■■□□□ 1.68
MAP1LC3A-204ENST00000476428 DNAJC2Q99543 621 aaKnown RBP25.56■■□□□ 1.68
MAP1LC3A-204ENST00000476428 ECHDC1Q9NTX5 307 aa25.56■■□□□ 1.68
MAP1LC3A-204ENST00000476428 IDH1O75874 414 aaKnown RBP25.55■■□□□ 1.68
MAP1LC3A-204ENST00000476428 HUNKP57058 714 aa25.55■■□□□ 1.68
MAP1LC3A-204ENST00000476428 NBPF12Q5TAG4 269 aaPredicted RBP25.55■■□□□ 1.68
MAP1LC3A-204ENST00000476428 SMC5Q8IY18 1101 aa25.55■■□□□ 1.68
MAP1LC3A-204ENST00000476428 AIDAQ96BJ3 306 aa25.55■■□□□ 1.68
MAP1LC3A-204ENST00000476428 TMEM39BQ9GZU3 492 aa25.55■■□□□ 1.68
MAP1LC3A-204ENST00000476428 AKAP11Q9UKA4 1901 aa25.55■■□□□ 1.68
MAP1LC3A-204ENST00000476428 GOLIM4O00461 696 aa25.54■■□□□ 1.68
MAP1LC3A-204ENST00000476428 FKBP1BP68106 108 aa25.54■■□□□ 1.68
MAP1LC3A-204ENST00000476428 TTF1Q15361 905 aaPredicted RBP25.54■■□□□ 1.68
MAP1LC3A-204ENST00000476428 SUPT20HL1Q3ZLR7 823 aa25.54■■□□□ 1.68
MAP1LC3A-204ENST00000476428 MOB2Q70IA6 237 aa25.54■■□□□ 1.68
MAP1LC3A-204ENST00000476428 FAM83AQ86UY5 434 aa25.54■■□□□ 1.68
MAP1LC3A-204ENST00000476428 OTUD7AQ8TE49 926 aaPredicted RBP25.54■■□□□ 1.68
MAP1LC3A-204ENST00000476428 EDC3Q96F86 508 aaKnown RBP25.54■■□□□ 1.68
MAP1LC3A-204ENST00000476428 TEPSINQ96N21 525 aa25.54■■□□□ 1.68
MAP1LC3A-204ENST00000476428 HAUS7Q99871 368 aa25.54■■□□□ 1.68
MAP1LC3A-204ENST00000476428 ZBTB47Q9UFB7 747 aaPredicted RBP25.54■■□□□ 1.68
MAP1LC3A-204ENST00000476428 CTCFP49711 727 aaPredicted RBP25.53■■□□□ 1.68
MAP1LC3A-204ENST00000476428 VEGFBP49765 207 aa25.53■■□□□ 1.68
MAP1LC3A-204ENST00000476428 NFIAQ12857 509 aa25.53■■□□□ 1.68
MAP1LC3A-204ENST00000476428 CDAN1Q8IWY9 1227 aa25.53■■□□□ 1.68
MAP1LC3A-204ENST00000476428 TRPM7Q96QT4 1865 aa25.53■■□□□ 1.68
MAP1LC3A-204ENST00000476428 RHBDL3P58872 404 aa25.52■■□□□ 1.68
MAP1LC3A-204ENST00000476428 MAP3K12Q12852 859 aa25.52■■□□□ 1.68
MAP1LC3A-204ENST00000476428 PRKG1Q13976 671 aa25.52■■□□□ 1.68
MAP1LC3A-204ENST00000476428 TTLL12Q14166 644 aaPredicted RBP25.52■■□□□ 1.68
MAP1LC3A-204ENST00000476428 TSHZ3Q63HK5 1081 aa25.52■■□□□ 1.68
MAP1LC3A-204ENST00000476428 GPATCH3Q96I76 525 aa25.52■■□□□ 1.68
MAP1LC3A-204ENST00000476428 HHIPL1Q96JK4 782 aa25.52■■□□□ 1.68
MAP1LC3A-204ENST00000476428 PAG1Q9NWQ8 432 aa25.52■■□□□ 1.68
MAP1LC3A-204ENST00000476428 FAM198AQ9UFP1 575 aa25.52■■□□□ 1.68
MAP1LC3A-204ENST00000476428 UBE2Q2LH0YL09 131 aa25.51■■□□□ 1.67
MAP1LC3A-204ENST00000476428 CYP7A1P22680 504 aa25.51■■□□□ 1.67
MAP1LC3A-204ENST00000476428 PAXIP1Q6ZW49 1069 aaPredicted RBP25.51■■□□□ 1.67
MAP1LC3A-204ENST00000476428 ADGRA1Q86SQ6 560 aa25.51■■□□□ 1.67
MAP1LC3A-204ENST00000476428 MAGEB6Q8N7X4 407 aa25.51■■□□□ 1.67
MAP1LC3A-204ENST00000476428 IDI2Q9BXS1 227 aa25.51■■□□□ 1.67
MAP1LC3A-204ENST00000476428 FZD1Q9UP38 647 aa25.51■■□□□ 1.67
MAP1LC3A-204ENST00000476428 WDHD1O75717 1129 aaPredicted RBP25.5■■□□□ 1.67
MAP1LC3A-204ENST00000476428 TCP10Q12799 353 aa25.5■■□□□ 1.67
MAP1LC3A-204ENST00000476428 B4GALNT3Q6L9W6 998 aa25.5■■□□□ 1.67
MAP1LC3A-204ENST00000476428 CYP4F22Q6NT55 531 aa25.5■■□□□ 1.67
MAP1LC3A-204ENST00000476428 FAM151AQ8WW52 585 aa25.5■■□□□ 1.67
MAP1LC3A-204ENST00000476428 PPP4CP60510 307 aa25.49■■□□□ 1.67
MAP1LC3A-204ENST00000476428 ARMC9Q7Z3E5 817 aa25.49■■□□□ 1.67
MAP1LC3A-204ENST00000476428 ZFPM1Q8IX07 1006 aa25.49■■□□□ 1.67
MAP1LC3A-204ENST00000476428 CAPNS2Q96L46 248 aa25.49■■□□□ 1.67
MAP1LC3A-204ENST00000476428 AATFQ9NY61 560 aaKnown RBP eCLIP25.49■■□□□ 1.67
MAP1LC3A-204ENST00000476428 ECM29Q5VYK3 1845 aa25.49■■□□□ 1.67
MAP1LC3A-204ENST00000476428 SSC5DA1L4H1 1573 aa25.48■■□□□ 1.67
MAP1LC3A-204ENST00000476428 TTC41PQ6P2S7 1318 aa25.48■■□□□ 1.67
MAP1LC3A-204ENST00000476428 WDR33Q9C0J8 1336 aaKnown RBP25.48■■□□□ 1.67
MAP1LC3A-204ENST00000476428 BAG3O95817 575 aa25.48■■□□□ 1.67
MAP1LC3A-204ENST00000476428 MAP4K4O95819 1239 aaPredicted RBP25.48■■□□□ 1.67
MAP1LC3A-204ENST00000476428 RGS3P49796 1198 aa25.48■■□□□ 1.67
MAP1LC3A-204ENST00000476428 LBX1P52954 281 aa25.48■■□□□ 1.67
MAP1LC3A-204ENST00000476428 RGMBQ6NW40 437 aa25.48■■□□□ 1.67
MAP1LC3A-204ENST00000476428 NOL10Q9BSC4 688 aaKnown RBP25.48■■□□□ 1.67
MAP1LC3A-204ENST00000476428 ANGEL1Q9UNK9 670 aaKnown RBP25.48■■□□□ 1.67
MAP1LC3A-204ENST00000476428 SALL3Q9BXA9 1300 aa25.47■■□□□ 1.67
MAP1LC3A-204ENST00000476428 PPP1R12BO60237 982 aaPredicted RBP25.47■■□□□ 1.67
MAP1LC3A-204ENST00000476428 ENTPD3O75355 529 aa25.47■■□□□ 1.67
MAP1LC3A-204ENST00000476428 USP2O75604 605 aaPredicted RBP25.47■■□□□ 1.67
MAP1LC3A-204ENST00000476428 ECE1P42892 770 aa25.47■■□□□ 1.67
MAP1LC3A-204ENST00000476428 GRM1Q13255 1194 aa25.47■■□□□ 1.67
MAP1LC3A-204ENST00000476428 LNPKQ9C0E8 428 aa25.47■■□□□ 1.67
MAP1LC3A-204ENST00000476428 DDX4Q9NQI0 724 aaKnown RBP25.47■■□□□ 1.67
MAP1LC3A-204ENST00000476428 PDE6AP16499 860 aa25.46■■□□□ 1.67
MAP1LC3A-204ENST00000476428 MX1P20591 662 aa25.46■■□□□ 1.67
MAP1LC3A-204ENST00000476428 NUCB1Q02818 461 aa25.46■■□□□ 1.67
MAP1LC3A-204ENST00000476428 MAP3K11Q16584 847 aa25.46■■□□□ 1.67
MAP1LC3A-204ENST00000476428 LDLRAD1Q5T700 205 aa25.46■■□□□ 1.67
MAP1LC3A-204ENST00000476428 SLC9C2Q5TAH2 1124 aa25.46■■□□□ 1.67
MAP1LC3A-204ENST00000476428 TMED8Q6PL24 325 aaPredicted RBP25.46■■□□□ 1.67
MAP1LC3A-204ENST00000476428 PI4K2BQ8TCG2 481 aa25.46■■□□□ 1.67
MAP1LC3A-204ENST00000476428 SH3RF3Q8TEJ3 882 aaPredicted RBP25.46■■□□□ 1.67
MAP1LC3A-204ENST00000476428 WBP1LQ9NX94 342 aa25.46■■□□□ 1.67
MAP1LC3A-204ENST00000476428 RFX7Q2KHR2 1363 aa25.45■■□□□ 1.67
MAP1LC3A-204ENST00000476428 MYH2Q9UKX2 1941 aa25.45■■□□□ 1.67
MAP1LC3A-204ENST00000476428 ZNF157P51786 506 aaPredicted RBP25.45■■□□□ 1.66
MAP1LC3A-204ENST00000476428 DYNLL1P63167 89 aaKnown RBP25.45■■□□□ 1.66
MAP1LC3A-204ENST00000476428 PICALMQ13492 652 aa25.45■■□□□ 1.66
MAP1LC3A-204ENST00000476428 CHD1LQ86WJ1 897 aa25.45■■□□□ 1.66
MAP1LC3A-204ENST00000476428 TEX11Q8IYF3 940 aa25.45■■□□□ 1.66
MAP1LC3A-204ENST00000476428 MIGA1Q8NAN2 632 aa25.45■■□□□ 1.66
MAP1LC3A-204ENST00000476428 ERC2O15083 957 aa25.44■■□□□ 1.66
MAP1LC3A-204ENST00000476428 NPM3O75607 178 aaKnown RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms