RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 USP2O75604 605 aaPredicted RBP16.16■□□□□ 0.18
NIPAL3-206ENST00000475663 UQCRFS1P1P0C7P4 283 aa16.16■□□□□ 0.18
NIPAL3-206ENST00000475663 ZAP70P43403 619 aa16.16■□□□□ 0.18
NIPAL3-206ENST00000475663 SUPT20HL1Q3ZLR7 823 aa16.16■□□□□ 0.18
NIPAL3-206ENST00000475663 CCDC158Q5M9N0 1113 aa16.16■□□□□ 0.18
NIPAL3-206ENST00000475663 ZGPATQ8N5A5 531 aaKnown RBP16.16■□□□□ 0.18
NIPAL3-206ENST00000475663 RAI14Q9P0K7 980 aa16.16■□□□□ 0.18
NIPAL3-206ENST00000475663 PDS5AQ29RF7 1337 aaKnown RBP16.16■□□□□ 0.18
NIPAL3-206ENST00000475663 PPP1R12BO60237 982 aaPredicted RBP16.15■□□□□ 0.18
NIPAL3-206ENST00000475663 HSPA8P11142 646 aaKnown RBP16.15■□□□□ 0.18
NIPAL3-206ENST00000475663 TNNI2P48788 182 aa16.15■□□□□ 0.18
NIPAL3-206ENST00000475663 LDLRAD1Q5T700 205 aa16.15■□□□□ 0.18
NIPAL3-206ENST00000475663 ZFPM1Q8IX07 1006 aa16.15■□□□□ 0.18
NIPAL3-206ENST00000475663 BEGAINQ9BUH8 593 aa16.15■□□□□ 0.18
NIPAL3-206ENST00000475663 LRP2BPQ9P2M1 347 aa16.15■□□□□ 0.18
NIPAL3-206ENST00000475663 MYH13Q9UKX3 1938 aa16.15■□□□□ 0.18
NIPAL3-206ENST00000475663 CYP2E1P05181 493 aaPredicted RBP16.14■□□□□ 0.17
NIPAL3-206ENST00000475663 BTDP43251 543 aa16.14■□□□□ 0.17
NIPAL3-206ENST00000475663 CTCFP49711 727 aaPredicted RBP16.14■□□□□ 0.17
NIPAL3-206ENST00000475663 SPTY2D1Q68D10 685 aaPredicted RBP16.14■□□□□ 0.17
NIPAL3-206ENST00000475663 ERC1Q8IUD2 1116 aa16.14■□□□□ 0.17
NIPAL3-206ENST00000475663 CSRNP1Q96S65 589 aa16.14■□□□□ 0.17
NIPAL3-206ENST00000475663 CRBNQ96SW2 442 aa16.14■□□□□ 0.17
NIPAL3-206ENST00000475663 CHMP4BQ9H444 224 aaKnown RBP16.14■□□□□ 0.17
NIPAL3-206ENST00000475663 PIH1D3Q9NQM4 214 aaKnown RBP16.14■□□□□ 0.17
NIPAL3-206ENST00000475663 FAM198AQ9UFP1 575 aa16.14■□□□□ 0.17
NIPAL3-206ENST00000475663 THSD7BQ9C0I4 1608 aa16.14■□□□□ 0.17
NIPAL3-206ENST00000475663 GAKO14976 1311 aa16.14■□□□□ 0.17
NIPAL3-206ENST00000475663 SMARCA5O60264 1052 aaPredicted RBP16.13■□□□□ 0.17
NIPAL3-206ENST00000475663 SLURP2P0DP57 97 aa16.13■□□□□ 0.17
NIPAL3-206ENST00000475663 HSP90AB4PQ58FF6 505 aa16.13■□□□□ 0.17
NIPAL3-206ENST00000475663 MIGA2Q7L4E1 593 aa16.13■□□□□ 0.17
NIPAL3-206ENST00000475663 NSUN4Q96CB9 384 aaKnown RBP16.13■□□□□ 0.17
NIPAL3-206ENST00000475663 KIF1BPQ96EK5 621 aa16.13■□□□□ 0.17
NIPAL3-206ENST00000475663 MROH7-TTC4A0A0A0MT08 1334 aa16.13■□□□□ 0.17
NIPAL3-206ENST00000475663 ECM29Q5VYK3 1845 aa16.12■□□□□ 0.17
NIPAL3-206ENST00000475663 ZBTB22O15209 634 aa16.12■□□□□ 0.17
NIPAL3-206ENST00000475663 PICALMQ13492 652 aa16.12■□□□□ 0.17
NIPAL3-206ENST00000475663 MAP3K11Q16584 847 aa16.12■□□□□ 0.17
NIPAL3-206ENST00000475663 CNKSR2Q8WXI2 1034 aa16.12■□□□□ 0.17
NIPAL3-206ENST00000475663 SLC10A4Q96EP9 437 aa16.12■□□□□ 0.17
NIPAL3-206ENST00000475663 ANTXR1Q9H6X2 564 aa16.12■□□□□ 0.17
NIPAL3-206ENST00000475663 ELP3Q9H9T3 547 aa16.12■□□□□ 0.17
NIPAL3-206ENST00000475663 DDX4Q9NQI0 724 aaKnown RBP16.12■□□□□ 0.17
NIPAL3-206ENST00000475663 PCDHB15Q9Y5E8 787 aa16.12■□□□□ 0.17
NIPAL3-206ENST00000475663 TRPA1O75762 1119 aa16.11■□□□□ 0.17
NIPAL3-206ENST00000475663 GJA5P36382 358 aa16.11■□□□□ 0.17
NIPAL3-206ENST00000475663 IREB2P48200 963 aaKnown RBP16.11■□□□□ 0.17
NIPAL3-206ENST00000475663 RGS3P49796 1198 aa16.11■□□□□ 0.17
NIPAL3-206ENST00000475663 SPRYD7Q5W111 196 aa16.11■□□□□ 0.17
NIPAL3-206ENST00000475663 FAM83AQ86UY5 434 aa16.11■□□□□ 0.17
NIPAL3-206ENST00000475663 CLASRPQ8N2M8 674 aaKnown RBP16.11■□□□□ 0.17
NIPAL3-206ENST00000475663 RHBDL3P58872 404 aa16.1■□□□□ 0.17
NIPAL3-206ENST00000475663 FKBP1CQ5VVH2 108 aa16.1■□□□□ 0.17
NIPAL3-206ENST00000475663 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.1■□□□□ 0.17
NIPAL3-206ENST00000475663 ADGRA1Q86SQ6 560 aa16.1■□□□□ 0.17
NIPAL3-206ENST00000475663 FAM151AQ8WW52 585 aa16.1■□□□□ 0.17
NIPAL3-206ENST00000475663 WNK4Q96J92 1243 aa16.1■□□□□ 0.17
NIPAL3-206ENST00000475663 ZNF512BQ96KM6 892 aaPredicted RBP16.1■□□□□ 0.17
NIPAL3-206ENST00000475663 RNF186Q9NXI6 227 aa16.1■□□□□ 0.17
NIPAL3-206ENST00000475663 GPR75-ASB3A0A0A6YYF3 556 aa16.09■□□□□ 0.17
NIPAL3-206ENST00000475663 RAB11FIP3O75154 756 aa16.09■□□□□ 0.17
NIPAL3-206ENST00000475663 WDHD1O75717 1129 aaPredicted RBP16.09■□□□□ 0.17
NIPAL3-206ENST00000475663 IDH1O75874 414 aaKnown RBP16.09■□□□□ 0.17
NIPAL3-206ENST00000475663 IFIT2P09913 472 aaKnown RBP16.09■□□□□ 0.17
NIPAL3-206ENST00000475663 NAA16Q6N069 864 aaPredicted RBP16.09■□□□□ 0.17
NIPAL3-206ENST00000475663 SH3BP5LQ7L8J4 393 aa16.09■□□□□ 0.17
NIPAL3-206ENST00000475663 SLF2Q8IX21 1173 aa16.09■□□□□ 0.17
NIPAL3-206ENST00000475663 ZKSCAN4Q969J2 545 aaPredicted RBP16.09■□□□□ 0.17
NIPAL3-206ENST00000475663 EDC3Q96F86 508 aaKnown RBP16.09■□□□□ 0.17
NIPAL3-206ENST00000475663 FAM163AQ96GL9 167 aaPredicted RBP16.09■□□□□ 0.17
NIPAL3-206ENST00000475663 LDHCP07864 332 aa16.08■□□□□ 0.16
NIPAL3-206ENST00000475663 GSTO1P78417 241 aa16.08■□□□□ 0.16
NIPAL3-206ENST00000475663 MAP3K9P80192 1104 aa16.08■□□□□ 0.16
NIPAL3-206ENST00000475663 VGLL4Q14135 290 aa16.08■□□□□ 0.16
NIPAL3-206ENST00000475663 ZSCAN29Q8IWY8 852 aaPredicted RBP16.08■□□□□ 0.16
NIPAL3-206ENST00000475663 ANKRD13AQ8IZ07 590 aa16.08■□□□□ 0.16
NIPAL3-206ENST00000475663 TNS4Q8IZW8 715 aa16.08■□□□□ 0.16
NIPAL3-206ENST00000475663 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.08■□□□□ 0.16
NIPAL3-206ENST00000475663 SH3RF3Q8TEJ3 882 aaPredicted RBP16.08■□□□□ 0.16
NIPAL3-206ENST00000475663 WRNIP1Q96S55 665 aa16.08■□□□□ 0.16
NIPAL3-206ENST00000475663 DNAJC2Q99543 621 aaKnown RBP16.08■□□□□ 0.16
NIPAL3-206ENST00000475663 AATFQ9NY61 560 aaKnown RBP eCLIP16.08■□□□□ 0.16
NIPAL3-206ENST00000475663 DDTLA6NHG4 134 aaPredicted RBP16.07■□□□□ 0.16
NIPAL3-206ENST00000475663 CYP7A1P22680 504 aa16.07■□□□□ 0.16
NIPAL3-206ENST00000475663 INPP5BP32019 993 aa16.07■□□□□ 0.16
NIPAL3-206ENST00000475663 DYNLL1P63167 89 aaKnown RBP16.07■□□□□ 0.16
NIPAL3-206ENST00000475663 OPTNQ96CV9 577 aa16.07■□□□□ 0.16
NIPAL3-206ENST00000475663 IDI2Q9BXS1 227 aa16.07■□□□□ 0.16
NIPAL3-206ENST00000475663 PRDM10Q9NQV6 1147 aa16.07■□□□□ 0.16
NIPAL3-206ENST00000475663 RFX7Q2KHR2 1363 aa16.06■□□□□ 0.16
NIPAL3-206ENST00000475663 TBC1D8O95759 1140 aa16.06■□□□□ 0.16
NIPAL3-206ENST00000475663 TEX11Q8IYF3 940 aa16.06■□□□□ 0.16
NIPAL3-206ENST00000475663 MAGEB6Q8N7X4 407 aa16.06■□□□□ 0.16
NIPAL3-206ENST00000475663 MIGA1Q8NAN2 632 aa16.06■□□□□ 0.16
NIPAL3-206ENST00000475663 LRRCC1Q9C099 1032 aa16.06■□□□□ 0.16
NIPAL3-206ENST00000475663 BOLA2Q9H3K6 86 aa16.06■□□□□ 0.16
NIPAL3-206ENST00000475663 SNCAIPQ9Y6H5 919 aa16.06■□□□□ 0.16
NIPAL3-206ENST00000475663 MYH2Q9UKX2 1941 aa16.06■□□□□ 0.16
NIPAL3-206ENST00000475663 RPAP1Q9BWH6 1393 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms