RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 CEP290O15078 2479 aa25.68■■□□□ 1.7
VPS36-203ENST00000475375 H0YGN5 161 aa25.68■■□□□ 1.7
VPS36-203ENST00000475375 PPATQ06203 517 aa25.68■■□□□ 1.7
VPS36-203ENST00000475375 ANKRD44Q8N8A2 993 aa25.68■■□□□ 1.7
VPS36-203ENST00000475375 INPP5BP32019 993 aa25.67■■□□□ 1.7
VPS36-203ENST00000475375 PUM3Q15397 648 aaKnown RBP25.67■■□□□ 1.7
VPS36-203ENST00000475375 HHIPL2Q6UWX4 724 aa25.67■■□□□ 1.7
VPS36-203ENST00000475375 ANP32CO43423 234 aa25.66■■□□□ 1.7
VPS36-203ENST00000475375 ZEB1P37275 1124 aaPredicted RBP25.66■■□□□ 1.7
VPS36-203ENST00000475375 PSMC4P43686 418 aa25.66■■□□□ 1.7
VPS36-203ENST00000475375 RPAP1Q9BWH6 1393 aaPredicted RBP25.66■■□□□ 1.7
VPS36-203ENST00000475375 PDHXO00330 501 aa25.65■■□□□ 1.7
VPS36-203ENST00000475375 FMNL1O95466 1100 aaPredicted RBP25.65■■□□□ 1.7
VPS36-203ENST00000475375 HOXD10P28358 340 aa25.65■■□□□ 1.7
VPS36-203ENST00000475375 TCP10Q12799 353 aa25.65■■□□□ 1.7
VPS36-203ENST00000475375 C17orf99Q6UX52 265 aa25.65■■□□□ 1.7
VPS36-203ENST00000475375 RAET1EQ8TD07 263 aa25.65■■□□□ 1.7
VPS36-203ENST00000475375 MTFR1Q15390 333 aa25.64■■□□□ 1.7
VPS36-203ENST00000475375 ANKRD23Q86SG2 305 aa25.64■■□□□ 1.7
VPS36-203ENST00000475375 WDR66Q8TBY9 1149 aa25.64■■□□□ 1.7
VPS36-203ENST00000475375 TRIM47Q96LD4 638 aa25.64■■□□□ 1.7
VPS36-203ENST00000475375 SRRDQ9UH36 339 aa25.64■■□□□ 1.7
VPS36-203ENST00000475375 SLC5A1P13866 664 aa25.63■■□□□ 1.69
VPS36-203ENST00000475375 FAM9BQ8IZU0 186 aa25.63■■□□□ 1.69
VPS36-203ENST00000475375 FAM151AQ8WW52 585 aa25.63■■□□□ 1.69
VPS36-203ENST00000475375 DPF3Q92784 378 aa25.63■■□□□ 1.69
VPS36-203ENST00000475375 BIN2Q9UBW5 565 aaPredicted RBP25.63■■□□□ 1.69
VPS36-203ENST00000475375 KIF16BQ96L93 1317 aa25.63■■□□□ 1.69
VPS36-203ENST00000475375 FGFR2P21802 821 aa25.62■■□□□ 1.69
VPS36-203ENST00000475375 CTGFP29279 349 aa25.62■■□□□ 1.69
VPS36-203ENST00000475375 TRIOBPQ9H2D6 2365 aa25.62■■□□□ 1.69
VPS36-203ENST00000475375 OSBPP22059 807 aa25.61■■□□□ 1.69
VPS36-203ENST00000475375 GRK4P32298 578 aa25.61■■□□□ 1.69
VPS36-203ENST00000475375 CHRDL2Q6WN34 429 aa25.61■■□□□ 1.69
VPS36-203ENST00000475375 DIXDC1Q155Q3 683 aa25.6■■□□□ 1.69
VPS36-203ENST00000475375 CDC42EP5Q6NZY7 148 aa25.6■■□□□ 1.69
VPS36-203ENST00000475375 MRPL50Q8N5N7 158 aaKnown RBP25.6■■□□□ 1.69
VPS36-203ENST00000475375 NKX2-3Q8TAU0 364 aa25.6■■□□□ 1.69
VPS36-203ENST00000475375 LPIN2Q92539 896 aa25.6■■□□□ 1.69
VPS36-203ENST00000475375 SHISA4Q96DD7 197 aa25.6■■□□□ 1.69
VPS36-203ENST00000475375 KCNH4Q9UQ05 1017 aa25.6■■□□□ 1.69
VPS36-203ENST00000475375 DAGLAQ9Y4D2 1042 aa25.6■■□□□ 1.69
VPS36-203ENST00000475375 MYPNQ86TC9 1320 aa25.6■■□□□ 1.69
VPS36-203ENST00000475375 ZNF112Q9UJU3 913 aa25.59■■□□□ 1.69
VPS36-203ENST00000475375 PTPRCP08575 1304 aa25.59■■□□□ 1.69
VPS36-203ENST00000475375 EYA2O00167 538 aa25.58■■□□□ 1.69
VPS36-203ENST00000475375 NFIAQ12857 509 aa25.58■■□□□ 1.69
VPS36-203ENST00000475375 PARK7Q99497 189 aaKnown RBP25.58■■□□□ 1.69
VPS36-203ENST00000475375 AK9Q5TCS8 1911 aa25.57■■□□□ 1.68
VPS36-203ENST00000475375 CCL5P13501 91 aa25.57■■□□□ 1.68
VPS36-203ENST00000475375 PRDX5P30044 214 aa25.57■■□□□ 1.68
VPS36-203ENST00000475375 USP44Q9H0E7 712 aa25.57■■□□□ 1.68
VPS36-203ENST00000475375 RNF208Q9H0X6 261 aa25.57■■□□□ 1.68
VPS36-203ENST00000475375 USP40Q9NVE5 1235 aa25.57■■□□□ 1.68
VPS36-203ENST00000475375 ADGRA2Q96PE1 1338 aa25.57■■□□□ 1.68
VPS36-203ENST00000475375 LDHBP07195 334 aaKnown RBP25.56■■□□□ 1.68
VPS36-203ENST00000475375 UBXN2AP68543 259 aa25.56■■□□□ 1.68
VPS36-203ENST00000475375 NOL9Q5SY16 702 aaKnown RBP25.56■■□□□ 1.68
VPS36-203ENST00000475375 GNL3LQ9NVN8 582 aaKnown RBP25.56■■□□□ 1.68
VPS36-203ENST00000475375 CYP2C8P10632 490 aa25.55■■□□□ 1.68
VPS36-203ENST00000475375 GJA8P48165 433 aa25.55■■□□□ 1.68
VPS36-203ENST00000475375 FCGRTP55899 365 aa25.55■■□□□ 1.68
VPS36-203ENST00000475375 PRKCZQ05513 592 aa25.55■■□□□ 1.68
VPS36-203ENST00000475375 MOGSQ13724 837 aa25.55■■□□□ 1.68
VPS36-203ENST00000475375 HTATIP2Q9BUP3 242 aa25.55■■□□□ 1.68
VPS36-203ENST00000475375 GJB1P08034 283 aa25.54■■□□□ 1.68
VPS36-203ENST00000475375 SIL1Q9H173 461 aa25.54■■□□□ 1.68
VPS36-203ENST00000475375 PICK1Q9NRD5 415 aa25.54■■□□□ 1.68
VPS36-203ENST00000475375 FAM198AQ9UFP1 575 aa25.54■■□□□ 1.68
VPS36-203ENST00000475375 MYH13Q9UKX3 1938 aa25.54■■□□□ 1.68
VPS36-203ENST00000475375 CXCL11O14625 94 aa25.53■■□□□ 1.68
VPS36-203ENST00000475375 RFX5P48382 616 aaPredicted RBP25.53■■□□□ 1.68
VPS36-203ENST00000475375 ATP2B3Q16720 1220 aa25.53■■□□□ 1.68
VPS36-203ENST00000475375 RANBP2P49792 3224 aaKnown RBP25.53■■□□□ 1.68
VPS36-203ENST00000475375 GPAT2Q6NUI2 795 aa25.52■■□□□ 1.68
VPS36-203ENST00000475375 GADL1Q6ZQY3 521 aa25.52■■□□□ 1.68
VPS36-203ENST00000475375 ZSCAN29Q8IWY8 852 aaPredicted RBP25.52■■□□□ 1.68
VPS36-203ENST00000475375 ZFPM1Q8IX07 1006 aa25.52■■□□□ 1.68
VPS36-203ENST00000475375 RBM27Q9P2N5 1060 aaKnown RBP25.52■■□□□ 1.68
VPS36-203ENST00000475375 SZT2Q5T011 3432 aa25.52■■□□□ 1.68
VPS36-203ENST00000475375 BCRP11274 1271 aa25.51■■□□□ 1.67
VPS36-203ENST00000475375 ATG9AQ7Z3C6 839 aa25.51■■□□□ 1.67
VPS36-203ENST00000475375 SLAIN1Q8ND83 568 aa25.51■■□□□ 1.67
VPS36-203ENST00000475375 SSH1Q8WYL5 1049 aa25.51■■□□□ 1.67
VPS36-203ENST00000475375 CEP126Q9P2H0 1117 aa25.51■■□□□ 1.67
VPS36-203ENST00000475375 ZHX2Q9Y6X8 837 aa25.51■■□□□ 1.67
VPS36-203ENST00000475375 FASTKD5Q7L8L6 764 aaKnown RBP25.5■■□□□ 1.67
VPS36-203ENST00000475375 SCYL3Q8IZE3 742 aa25.5■■□□□ 1.67
VPS36-203ENST00000475375 DENND2AQ9ULE3 1009 aa25.5■■□□□ 1.67
VPS36-203ENST00000475375 GABRQQ9UN88 632 aa25.5■■□□□ 1.67
VPS36-203ENST00000475375 NR2E3Q9Y5X4 410 aa25.5■■□□□ 1.67
VPS36-203ENST00000475375 FARP2O94887 1054 aaPredicted RBP25.49■■□□□ 1.67
VPS36-203ENST00000475375 RGS3P49796 1198 aa25.49■■□□□ 1.67
VPS36-203ENST00000475375 U2AF1L4Q8WU68 220 aaKnown RBP25.49■■□□□ 1.67
VPS36-203ENST00000475375 UNC93B1Q9H1C4 597 aa25.49■■□□□ 1.67
VPS36-203ENST00000475375 A0A0G2JLL6 359 aaPredicted RBP25.48■■□□□ 1.67
VPS36-203ENST00000475375 PRRT2Q7Z6L0 340 aaPredicted RBP25.48■■□□□ 1.67
VPS36-203ENST00000475375 LRRFIP2Q9Y608 721 aaKnown RBP25.48■■□□□ 1.67
VPS36-203ENST00000475375 ZNF521Q96K83 1311 aa25.47■■□□□ 1.67
VPS36-203ENST00000475375 SALL1Q9NSC2 1324 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms