RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 FAM198AQ9UFP1 575 aa22.09■■□□□ 1.13
EFNA1-204ENST00000474413 ANGEL1Q9UNK9 670 aaKnown RBP22.09■■□□□ 1.13
EFNA1-204ENST00000474413 MROH7-TTC4A0A0A0MT08 1334 aa22.08■■□□□ 1.13
EFNA1-204ENST00000474413 APBB1O00213 710 aa22.08■■□□□ 1.13
EFNA1-204ENST00000474413 HMMRO75330 724 aa22.08■■□□□ 1.13
EFNA1-204ENST00000474413 TTC39AQ5SRH9 613 aa22.08■■□□□ 1.13
EFNA1-204ENST00000474413 AACSQ86V21 672 aa22.08■■□□□ 1.13
EFNA1-204ENST00000474413 DZIP1Q86YF9 867 aaKnown RBP22.08■■□□□ 1.13
EFNA1-204ENST00000474413 NSUN4Q96CB9 384 aaKnown RBP22.08■■□□□ 1.13
EFNA1-204ENST00000474413 FAM163AQ96GL9 167 aaPredicted RBP22.08■■□□□ 1.13
EFNA1-204ENST00000474413 PIH1D3Q9NQM4 214 aaKnown RBP22.08■■□□□ 1.13
EFNA1-204ENST00000474413 NDUFB9Q9Y6M9 179 aa22.08■■□□□ 1.13
EFNA1-204ENST00000474413 ATRNL1Q5VV63 1379 aa22.08■■□□□ 1.12
EFNA1-204ENST00000474413 USP2O75604 605 aaPredicted RBP22.07■■□□□ 1.12
EFNA1-204ENST00000474413 HSPA8P11142 646 aaKnown RBP22.07■■□□□ 1.12
EFNA1-204ENST00000474413 ZAP70P43403 619 aa22.07■■□□□ 1.12
EFNA1-204ENST00000474413 KIF23Q02241 960 aaPredicted RBP22.07■■□□□ 1.12
EFNA1-204ENST00000474413 MAP2K1Q02750 393 aaPredicted RBP22.07■■□□□ 1.12
EFNA1-204ENST00000474413 TTLL12Q14166 644 aaPredicted RBP22.07■■□□□ 1.12
EFNA1-204ENST00000474413 COL13A1Q5TAT6 717 aaPredicted RBP22.07■■□□□ 1.12
EFNA1-204ENST00000474413 FAM83AQ86UY5 434 aa22.07■■□□□ 1.12
EFNA1-204ENST00000474413 CCDC102AQ96A19 550 aa22.07■■□□□ 1.12
EFNA1-204ENST00000474413 CHMP4BQ9H444 224 aaKnown RBP22.07■■□□□ 1.12
EFNA1-204ENST00000474413 PCDHB15Q9Y5E8 787 aa22.07■■□□□ 1.12
EFNA1-204ENST00000474413 RHBDL3P58872 404 aa22.06■■□□□ 1.12
EFNA1-204ENST00000474413 HSP90AB4PQ58FF6 505 aa22.06■■□□□ 1.12
EFNA1-204ENST00000474413 ZFPM1Q8IX07 1006 aa22.06■■□□□ 1.12
EFNA1-204ENST00000474413 CRBNQ96SW2 442 aa22.06■■□□□ 1.12
EFNA1-204ENST00000474413 CDK5RAP2Q96SN8 1893 aa22.06■■□□□ 1.12
EFNA1-204ENST00000474413 WDHD1O75717 1129 aaPredicted RBP22.05■■□□□ 1.12
EFNA1-204ENST00000474413 BTDP43251 543 aa22.05■■□□□ 1.12
EFNA1-204ENST00000474413 SUPT20HL1Q3ZLR7 823 aa22.05■■□□□ 1.12
EFNA1-204ENST00000474413 CCDC158Q5M9N0 1113 aa22.05■■□□□ 1.12
EFNA1-204ENST00000474413 ERICH6Q7L0X2 663 aa22.05■■□□□ 1.12
EFNA1-204ENST00000474413 ARMC9Q7Z3E5 817 aa22.05■■□□□ 1.12
EFNA1-204ENST00000474413 KIF1BPQ96EK5 621 aa22.05■■□□□ 1.12
EFNA1-204ENST00000474413 DDX4Q9NQI0 724 aaKnown RBP22.05■■□□□ 1.12
EFNA1-204ENST00000474413 GPR75-ASB3A0A0A6YYF3 556 aa22.04■■□□□ 1.12
EFNA1-204ENST00000474413 GJA5P36382 358 aa22.04■■□□□ 1.12
EFNA1-204ENST00000474413 TNNI2P48788 182 aa22.04■■□□□ 1.12
EFNA1-204ENST00000474413 SPTY2D1Q68D10 685 aaPredicted RBP22.04■■□□□ 1.12
EFNA1-204ENST00000474413 ADGRA1Q86SQ6 560 aa22.04■■□□□ 1.12
EFNA1-204ENST00000474413 USP40Q9NVE5 1235 aa22.04■■□□□ 1.12
EFNA1-204ENST00000474413 TSKSQ9UJT2 592 aa22.04■■□□□ 1.12
EFNA1-204ENST00000474413 FOCADQ5VW36 1801 aa22.03■■□□□ 1.12
EFNA1-204ENST00000474413 RAB11FIP3O75154 756 aa22.03■■□□□ 1.12
EFNA1-204ENST00000474413 SH3BP5LQ7L8J4 393 aa22.03■■□□□ 1.12
EFNA1-204ENST00000474413 FAM151AQ8WW52 585 aa22.03■■□□□ 1.12
EFNA1-204ENST00000474413 CSRNP1Q96S65 589 aa22.03■■□□□ 1.12
EFNA1-204ENST00000474413 IDI2Q9BXS1 227 aa22.03■■□□□ 1.12
EFNA1-204ENST00000474413 ANTXR1Q9H6X2 564 aa22.03■■□□□ 1.12
EFNA1-204ENST00000474413 TMOD2Q9NZR1 351 aa22.03■■□□□ 1.12
EFNA1-204ENST00000474413 SIPA1L1O43166 1804 aa22.03■■□□□ 1.12
EFNA1-204ENST00000474413 TCP10Q12799 353 aa22.02■■□□□ 1.12
EFNA1-204ENST00000474413 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.02■■□□□ 1.12
EFNA1-204ENST00000474413 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.02■■□□□ 1.121e-25■□□□□ 8.5
EFNA1-204ENST00000474413 RAI14Q9P0K7 980 aa22.02■■□□□ 1.12
EFNA1-204ENST00000474413 PPP1R12BO60237 982 aaPredicted RBP22.01■■□□□ 1.11
EFNA1-204ENST00000474413 SMARCA5O60264 1052 aaPredicted RBP22.01■■□□□ 1.11
EFNA1-204ENST00000474413 CTCFP49711 727 aaPredicted RBP22.01■■□□□ 1.11
EFNA1-204ENST00000474413 RGS3P49796 1198 aa22.01■■□□□ 1.11
EFNA1-204ENST00000474413 LBX1P52954 281 aa22.01■■□□□ 1.11
EFNA1-204ENST00000474413 MKRN3Q13064 507 aaKnown RBP22.01■■□□□ 1.11
EFNA1-204ENST00000474413 SPRYD7Q5W111 196 aa22.01■■□□□ 1.11
EFNA1-204ENST00000474413 AIDAQ96BJ3 306 aa22.01■■□□□ 1.11
EFNA1-204ENST00000474413 SLURP2P0DP57 97 aa22■■□□□ 1.11
EFNA1-204ENST00000474413 CLASRPQ8N2M8 674 aaKnown RBP22■■□□□ 1.11
EFNA1-204ENST00000474413 CNKSR2Q8WXI2 1034 aa22■■□□□ 1.11
EFNA1-204ENST00000474413 DCTPP1Q9H773 170 aa22■■□□□ 1.11
EFNA1-204ENST00000474413 LRP2BPQ9P2M1 347 aa22■■□□□ 1.11
EFNA1-204ENST00000474413 VGLL4Q14135 290 aa21.99■■□□□ 1.11
EFNA1-204ENST00000474413 WNK4Q96J92 1243 aa21.99■■□□□ 1.11
EFNA1-204ENST00000474413 DDX60LQ5H9U9 1706 aaKnown RBP21.99■■□□□ 1.11
EFNA1-204ENST00000474413 COL2A1P02458 1487 aaPredicted RBP21.98■■□□□ 1.11
EFNA1-204ENST00000474413 IREB2P48200 963 aaKnown RBP21.98■■□□□ 1.11
EFNA1-204ENST00000474413 SLF2Q8IX21 1173 aa21.98■■□□□ 1.11
EFNA1-204ENST00000474413 SNCAIPQ9Y6H5 919 aa21.98■■□□□ 1.11
EFNA1-204ENST00000474413 DDTLA6NHG4 134 aaPredicted RBP21.97■■□□□ 1.11
EFNA1-204ENST00000474413 UNCXA6NJT0 531 aa21.97■■□□□ 1.11
EFNA1-204ENST00000474413 ENTPD3O75355 529 aa21.97■■□□□ 1.11
EFNA1-204ENST00000474413 ANKRD13AQ8IZ07 590 aa21.97■■□□□ 1.11
EFNA1-204ENST00000474413 EDC3Q96F86 508 aaKnown RBP21.97■■□□□ 1.11
EFNA1-204ENST00000474413 LRRCC1Q9C099 1032 aa21.97■■□□□ 1.11
EFNA1-204ENST00000474413 PRDM10Q9NQV6 1147 aa21.97■■□□□ 1.11
EFNA1-204ENST00000474413 RNF186Q9NXI6 227 aa21.97■■□□□ 1.11
EFNA1-204ENST00000474413 GSTO1P78417 241 aa21.96■■□□□ 1.11
EFNA1-204ENST00000474413 NAA16Q6N069 864 aaPredicted RBP21.96■■□□□ 1.11
EFNA1-204ENST00000474413 MIGA2Q7L4E1 593 aa21.96■■□□□ 1.11
EFNA1-204ENST00000474413 SH3RF3Q8TEJ3 882 aaPredicted RBP21.96■■□□□ 1.11
EFNA1-204ENST00000474413 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.96■■□□□ 1.11
EFNA1-204ENST00000474413 ELP3Q9H9T3 547 aa21.96■■□□□ 1.11
EFNA1-204ENST00000474413 IFIT2P09913 472 aaKnown RBP21.95■■□□□ 1.1
EFNA1-204ENST00000474413 PICALMQ13492 652 aa21.95■■□□□ 1.1
EFNA1-204ENST00000474413 ZKSCAN4Q969J2 545 aaPredicted RBP21.95■■□□□ 1.1
EFNA1-204ENST00000474413 SLC10A4Q96EP9 437 aa21.95■■□□□ 1.1
EFNA1-204ENST00000474413 WRNIP1Q96S55 665 aa21.95■■□□□ 1.1
EFNA1-204ENST00000474413 BCL11AQ9H165 835 aa21.95■■□□□ 1.1
EFNA1-204ENST00000474413 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.95■■□□□ 1.1
EFNA1-204ENST00000474413 ZNF112Q9UJU3 913 aa21.95■■□□□ 1.1
EFNA1-204ENST00000474413 AK9Q5TCS8 1911 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms