RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 SSC5DA1L4H1 1573 aa25.16■■□□□ 1.62
SNX13-206ENST00000474067 USP2O75604 605 aaPredicted RBP25.16■■□□□ 1.62
SNX13-206ENST00000474067 MAP4K4O95819 1239 aaPredicted RBP25.16■■□□□ 1.62
SNX13-206ENST00000474067 ARID4AP29374 1257 aaPredicted RBP25.16■■□□□ 1.62
SNX13-206ENST00000474067 SPATA5Q8NB90 893 aa25.16■■□□□ 1.62
SNX13-206ENST00000474067 TMEM39BQ9GZU3 492 aa25.16■■□□□ 1.62
SNX13-206ENST00000474067 C1orf115Q9H7X2 142 aa25.16■■□□□ 1.62
SNX13-206ENST00000474067 TNNI3KQ59H18 835 aa25.15■■□□□ 1.62
SNX13-206ENST00000474067 TTC39AQ5SRH9 613 aa25.15■■□□□ 1.62
SNX13-206ENST00000474067 RPAP2Q8IXW5 612 aaPredicted RBP25.15■■□□□ 1.62
SNX13-206ENST00000474067 PANK1Q8TE04 598 aa25.15■■□□□ 1.62
SNX13-206ENST00000474067 FAM151AQ8WW52 585 aa25.15■■□□□ 1.62
SNX13-206ENST00000474067 FAM163AQ96GL9 167 aaPredicted RBP25.15■■□□□ 1.62
SNX13-206ENST00000474067 TEPSINQ96N21 525 aa25.15■■□□□ 1.62
SNX13-206ENST00000474067 TSKSQ9UJT2 592 aa25.15■■□□□ 1.62
SNX13-206ENST00000474067 FPGT-TNNI3KV9GXZ4 949 aa25.15■■□□□ 1.62
SNX13-206ENST00000474067 CEP85Q6P2H3 762 aa25.14■■□□□ 1.62
SNX13-206ENST00000474067 AOX1Q06278 1338 aa25.13■■□□□ 1.61
SNX13-206ENST00000474067 MAP3K9P80192 1104 aa25.13■■□□□ 1.61
SNX13-206ENST00000474067 PDE3AQ14432 1141 aa25.13■■□□□ 1.61
SNX13-206ENST00000474067 DIXDC1Q155Q3 683 aa25.13■■□□□ 1.61
SNX13-206ENST00000474067 WNK4Q96J92 1243 aa25.13■■□□□ 1.61
SNX13-206ENST00000474067 NOL10Q9BSC4 688 aaKnown RBP25.13■■□□□ 1.61
SNX13-206ENST00000474067 USP40Q9NVE5 1235 aa25.13■■□□□ 1.61
SNX13-206ENST00000474067 NOM1Q5C9Z4 860 aaKnown RBP25.12■■□□□ 1.61
SNX13-206ENST00000474067 CDC42EP5Q6NZY7 148 aa25.12■■□□□ 1.61
SNX13-206ENST00000474067 ZNF512BQ96KM6 892 aaPredicted RBP25.12■■□□□ 1.61
SNX13-206ENST00000474067 HMG20BQ9P0W2 317 aa25.12■■□□□ 1.61
SNX13-206ENST00000474067 GAKO14976 1311 aa25.12■■□□□ 1.61
SNX13-206ENST00000474067 WDHD1O75717 1129 aaPredicted RBP25.11■■□□□ 1.61
SNX13-206ENST00000474067 CACNB3P54284 484 aa25.11■■□□□ 1.61
SNX13-206ENST00000474067 CFHR5Q9BXR6 569 aa25.11■■□□□ 1.61
SNX13-206ENST00000474067 ZNF341Q9BYN7 854 aa25.11■■□□□ 1.61
SNX13-206ENST00000474067 LRP2BPQ9P2M1 347 aa25.11■■□□□ 1.61
SNX13-206ENST00000474067 ENTPD3O75355 529 aa25.1■■□□□ 1.61
SNX13-206ENST00000474067 MKRN3Q13064 507 aaKnown RBP25.1■■□□□ 1.61
SNX13-206ENST00000474067 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.1■■□□□ 1.61
SNX13-206ENST00000474067 IDI2Q9BXS1 227 aa25.1■■□□□ 1.61
SNX13-206ENST00000474067 MROH7-TTC4A0A0A0MT08 1334 aa25.1■■□□□ 1.61
SNX13-206ENST00000474067 TMED8Q6PL24 325 aaPredicted RBP25.09■■□□□ 1.61
SNX13-206ENST00000474067 RAI14Q9P0K7 980 aa25.09■■□□□ 1.61
SNX13-206ENST00000474067 COG6Q9Y2V7 657 aa25.09■■□□□ 1.61
SNX13-206ENST00000474067 MYH2Q9UKX2 1941 aa25.09■■□□□ 1.61
SNX13-206ENST00000474067 OPTNQ96CV9 577 aa25.08■■□□□ 1.61
SNX13-206ENST00000474067 CLMNQ96JQ2 1002 aa25.08■■□□□ 1.61
SNX13-206ENST00000474067 WRNIP1Q96S55 665 aa25.08■■□□□ 1.61
SNX13-206ENST00000474067 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.08■■□□□ 1.61
SNX13-206ENST00000474067 FZD1Q9UP38 647 aa25.08■■□□□ 1.61
SNX13-206ENST00000474067 BTDP43251 543 aa25.07■■□□□ 1.6
SNX13-206ENST00000474067 GTF2A2P52657 109 aa25.07■■□□□ 1.6
SNX13-206ENST00000474067 MECOMQ03112 1051 aa25.07■■□□□ 1.6
SNX13-206ENST00000474067 ELP3Q9H9T3 547 aa25.07■■□□□ 1.6
SNX13-206ENST00000474067 LAMB1P07942 1786 aa25.06■■□□□ 1.6
SNX13-206ENST00000474067 NPM3O75607 178 aaKnown RBP25.06■■□□□ 1.6
SNX13-206ENST00000474067 BAG3O95817 575 aa25.06■■□□□ 1.6
SNX13-206ENST00000474067 PLCG2P16885 1265 aa25.06■■□□□ 1.6
SNX13-206ENST00000474067 MCAMP43121 646 aa25.06■■□□□ 1.6
SNX13-206ENST00000474067 TCP10Q12799 353 aa25.06■■□□□ 1.6
SNX13-206ENST00000474067 VGLL4Q14135 290 aa25.06■■□□□ 1.6
SNX13-206ENST00000474067 ERO1BQ86YB8 467 aa25.06■■□□□ 1.6
SNX13-206ENST00000474067 IFNL1Q8IU54 200 aa25.06■■□□□ 1.6
SNX13-206ENST00000474067 CERS3Q8IU89 383 aa25.06■■□□□ 1.6
SNX13-206ENST00000474067 CLASRPQ8N2M8 674 aaKnown RBP25.06■■□□□ 1.6
SNX13-206ENST00000474067 ZBTB40Q9NUA8 1239 aa25.06■■□□□ 1.6
SNX13-206ENST00000474067 GPR75-ASB3A0A0A6YYF3 556 aa25.05■■□□□ 1.6
SNX13-206ENST00000474067 RAB11FIP3O75154 756 aa25.05■■□□□ 1.6
SNX13-206ENST00000474067 DGKZQ13574 1117 aa25.05■■□□□ 1.6
SNX13-206ENST00000474067 PKN2Q16513 984 aaKnown RBP25.05■■□□□ 1.6
SNX13-206ENST00000474067 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.05■■□□□ 1.6
SNX13-206ENST00000474067 ZSCAN29Q8IWY8 852 aaPredicted RBP25.05■■□□□ 1.6
SNX13-206ENST00000474067 KIF1BPQ96EK5 621 aa25.05■■□□□ 1.6
SNX13-206ENST00000474067 DBNDD2Q9BQY9 259 aa25.05■■□□□ 1.6
SNX13-206ENST00000474067 AK9Q5TCS8 1911 aa25.04■■□□□ 1.6
SNX13-206ENST00000474067 SPDYE5A6NIY4 337 aa25.04■■□□□ 1.6
SNX13-206ENST00000474067 CAPN15O75808 1086 aa25.04■■□□□ 1.6
SNX13-206ENST00000474067 NSUN4Q96CB9 384 aaKnown RBP25.04■■□□□ 1.6
SNX13-206ENST00000474067 ABHD8Q96I13 439 aa25.04■■□□□ 1.6
SNX13-206ENST00000474067 RGS3P49796 1198 aa25.03■■□□□ 1.6
SNX13-206ENST00000474067 EXOC6BQ9Y2D4 811 aa25.03■■□□□ 1.6
SNX13-206ENST00000474067 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.03■■□□□ 1.6
SNX13-206ENST00000474067 OTOFQ9HC10 1997 aa25.03■■□□□ 1.6
SNX13-206ENST00000474067 CASP8AP2Q9UKL3 1982 aa25.03■■□□□ 1.6
SNX13-206ENST00000474067 TESPA1A2RU30 521 aaPredicted RBP25.02■■□□□ 1.6
SNX13-206ENST00000474067 TBC1D8O95759 1140 aa25.02■■□□□ 1.6
SNX13-206ENST00000474067 NFIAQ12857 509 aa25.02■■□□□ 1.6
SNX13-206ENST00000474067 NAA16Q6N069 864 aaPredicted RBP25.02■■□□□ 1.6
SNX13-206ENST00000474067 CTU1Q7Z7A3 348 aaKnown RBP25.02■■□□□ 1.6
SNX13-206ENST00000474067 FAM198AQ9UFP1 575 aa25.02■■□□□ 1.6
SNX13-206ENST00000474067 GPR25O00155 361 aa25.01■■□□□ 1.59
SNX13-206ENST00000474067 CETPP11597 493 aa25.01■■□□□ 1.59
SNX13-206ENST00000474067 PPATQ06203 517 aa25.01■■□□□ 1.59
SNX13-206ENST00000474067 AACSQ86V21 672 aa25.01■■□□□ 1.59
SNX13-206ENST00000474067 CDAN1Q8IWY9 1227 aa25.01■■□□□ 1.59
SNX13-206ENST00000474067 RHPN1Q8TCX5 695 aa25.01■■□□□ 1.59
SNX13-206ENST00000474067 OTUD5Q96G74 571 aa25.01■■□□□ 1.59
SNX13-206ENST00000474067 MCOLN1Q9GZU1 580 aa25.01■■□□□ 1.59
SNX13-206ENST00000474067 ZCCHC17Q9NP64 241 aaKnown RBP25.01■■□□□ 1.59
SNX13-206ENST00000474067 DBNLQ9UJU6 430 aaKnown RBP25.01■■□□□ 1.59
SNX13-206ENST00000474067 FKTNO75072 461 aa25■■□□□ 1.59
SNX13-206ENST00000474067 SNAPC2Q13487 334 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms