RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 RNF208Q9H0X6 261 aa3.76□□□□□ -1.81
CALD1-216ENST00000473714 PAK6Q9NQU5 681 aaPredicted RBP3.76□□□□□ -1.81
CALD1-216ENST00000473714 KLK14Q9P0G3 267 aa3.76□□□□□ -1.81
CALD1-216ENST00000473714 RTCBQ9Y3I0 505 aaKnown RBP3.76□□□□□ -1.81
CALD1-216ENST00000473714 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.76□□□□□ -1.81
CALD1-216ENST00000473714 DEPDC5O75140 1603 aa3.76□□□□□ -1.81
CALD1-216ENST00000473714 DIP2CQ9Y2E4 1556 aa3.76□□□□□ -1.81
CALD1-216ENST00000473714 ADGBQ8N7X0 1667 aa3.75□□□□□ -1.81
CALD1-216ENST00000473714 FAM177BA6PVY3 158 aa3.75□□□□□ -1.81
CALD1-216ENST00000473714 DDX3YO15523 660 aaKnown RBP3.75□□□□□ -1.81
CALD1-216ENST00000473714 SMNDC1O75940 238 aaKnown RBP eCLIP3.75□□□□□ -1.81
CALD1-216ENST00000473714 RASA1P20936 1047 aa3.75□□□□□ -1.81
CALD1-216ENST00000473714 R3HDM1Q15032 1099 aaKnown RBP3.75□□□□□ -1.81
CALD1-216ENST00000473714 PLEKHM2Q8IWE5 1019 aa3.75□□□□□ -1.81
CALD1-216ENST00000473714 SIX5Q8N196 739 aa3.75□□□□□ -1.81
CALD1-216ENST00000473714 CMTR1Q8N1G2 835 aaKnown RBP3.75□□□□□ -1.81
CALD1-216ENST00000473714 UBASH3BQ8TF42 649 aa3.75□□□□□ -1.81
CALD1-216ENST00000473714 COL26A1Q96A83 441 aa3.75□□□□□ -1.81
CALD1-216ENST00000473714 PPP1R12CQ9BZL4 782 aa3.75□□□□□ -1.81
CALD1-216ENST00000473714 TFIP11Q9UBB9 837 aaKnown RBP3.75□□□□□ -1.81
CALD1-216ENST00000473714 CLTCQ00610 1675 aaKnown RBP3.75□□□□□ -1.81
CALD1-216ENST00000473714 ABCA6Q8N139 1617 aa3.74□□□□□ -1.81
CALD1-216ENST00000473714 BRD1O95696 1058 aa3.74□□□□□ -1.81
CALD1-216ENST00000473714 HOXD8P13378 290 aaPredicted RBP3.74□□□□□ -1.81
CALD1-216ENST00000473714 RBM25P49756 843 aaKnown RBP3.74□□□□□ -1.81
CALD1-216ENST00000473714 MFAP1P55081 439 aaKnown RBP3.74□□□□□ -1.81
CALD1-216ENST00000473714 KCNA1Q09470 495 aa3.74□□□□□ -1.81
CALD1-216ENST00000473714 DGKZQ13574 1117 aa3.74□□□□□ -1.81
CALD1-216ENST00000473714 PLCL1Q15111 1095 aa3.74□□□□□ -1.81
CALD1-216ENST00000473714 CEP135Q66GS9 1140 aa3.74□□□□□ -1.81
CALD1-216ENST00000473714 PAOXQ6QHF9 649 aa3.74□□□□□ -1.81
CALD1-216ENST00000473714 THEMISQ8N1K5 641 aaPredicted RBP3.74□□□□□ -1.81
CALD1-216ENST00000473714 TMEM40Q8WWA1 233 aa3.74□□□□□ -1.81
CALD1-216ENST00000473714 FOXD4L4Q8WXT5 416 aaPredicted RBP3.74□□□□□ -1.81
CALD1-216ENST00000473714 KLHDC7BQ96G42 594 aa3.74□□□□□ -1.81
CALD1-216ENST00000473714 FAM84AQ96KN4 292 aa3.74□□□□□ -1.81
CALD1-216ENST00000473714 SPACA7Q96KW9 195 aa3.74□□□□□ -1.81
CALD1-216ENST00000473714 TOX2Q96NM4 488 aa3.74□□□□□ -1.81
CALD1-216ENST00000473714 RUSC1Q9BVN2 902 aa3.74□□□□□ -1.81
CALD1-216ENST00000473714 SEC31BQ9NQW1 1179 aa3.74□□□□□ -1.81
CALD1-216ENST00000473714 SLAIN2Q9P270 581 aa3.74□□□□□ -1.81
CALD1-216ENST00000473714 MKRN1Q9UHC7 482 aaKnown RBP3.74□□□□□ -1.81
CALD1-216ENST00000473714 TRPC5Q9UL62 973 aaPredicted RBP3.74□□□□□ -1.81
CALD1-216ENST00000473714 USTQ9Y2C2 406 aa3.74□□□□□ -1.81
CALD1-216ENST00000473714 USP20Q9Y2K6 914 aa3.74□□□□□ -1.81
CALD1-216ENST00000473714 ITSN2Q9NZM3 1697 aa3.74□□□□□ -1.81
CALD1-216ENST00000473714 UTRNP46939 3433 aa3.73□□□□□ -1.81
CALD1-216ENST00000473714 FAM95CA0A1B0GW59 222 aa3.73□□□□□ -1.81
CALD1-216ENST00000473714 BUD31P41223 144 aaPredicted RBP3.73□□□□□ -1.81
CALD1-216ENST00000473714 NFKBIBQ15653 356 aa3.73□□□□□ -1.81
CALD1-216ENST00000473714 SGO2Q562F6 1265 aa3.73□□□□□ -1.81
CALD1-216ENST00000473714 B4GALNT3Q6L9W6 998 aa3.73□□□□□ -1.81
CALD1-216ENST00000473714 DNAJC5GQ8N7S2 189 aa3.73□□□□□ -1.81
CALD1-216ENST00000473714 ZSCAN18Q8TBC5 510 aaPredicted RBP3.73□□□□□ -1.81
CALD1-216ENST00000473714 FAM168AQ92567 244 aa3.73□□□□□ -1.81
CALD1-216ENST00000473714 C8orf37Q96NL8 207 aa3.73□□□□□ -1.81
CALD1-216ENST00000473714 HINFPQ9BQA5 517 aa3.73□□□□□ -1.81
CALD1-216ENST00000473714 PPP1R1BQ9UD71 204 aaPredicted RBP3.73□□□□□ -1.81
CALD1-216ENST00000473714 WWC3Q9ULE0 1092 aa3.73□□□□□ -1.81
CALD1-216ENST00000473714 MTMR7Q9Y216 660 aa3.73□□□□□ -1.81
CALD1-216ENST00000473714 RALGAPBQ86X10 1494 aa3.73□□□□□ -1.81
CALD1-216ENST00000473714 ZC3H13Q5T200 1668 aaKnown RBP3.72□□□□□ -1.81
CALD1-216ENST00000473714 ABCC1P33527 1531 aa3.72□□□□□ -1.81
CALD1-216ENST00000473714 OPLAHO14841 1288 aa3.72□□□□□ -1.81
CALD1-216ENST00000473714 TM4SF5O14894 197 aa3.72□□□□□ -1.81
CALD1-216ENST00000473714 ATP9BO43861 1147 aa3.72□□□□□ -1.81
CALD1-216ENST00000473714 ADAM11O75078 769 aa3.72□□□□□ -1.81
CALD1-216ENST00000473714 RAP1GAPP47736 663 aa3.72□□□□□ -1.81
CALD1-216ENST00000473714 USP11P51784 963 aa3.72□□□□□ -1.81
CALD1-216ENST00000473714 C11orf91Q3C1V1 193 aa3.72□□□□□ -1.81
CALD1-216ENST00000473714 ZNF792Q3KQV3 632 aa3.72□□□□□ -1.81
CALD1-216ENST00000473714 DUSP27Q5VZP5 1158 aa3.72□□□□□ -1.81
CALD1-216ENST00000473714 ATG4DQ86TL0 474 aaPredicted RBP3.72□□□□□ -1.81
CALD1-216ENST00000473714 RGL4Q8IZJ4 473 aa3.72□□□□□ -1.81
CALD1-216ENST00000473714 C12orf50Q8NA57 414 aaPredicted RBP3.72□□□□□ -1.81
CALD1-216ENST00000473714 BHLHE22Q8NFJ8 381 aaPredicted RBP3.72□□□□□ -1.81
CALD1-216ENST00000473714 TBC1D32Q96NH3 1257 aa3.72□□□□□ -1.81
CALD1-216ENST00000473714 VRTNQ9H8Y1 702 aa3.72□□□□□ -1.81
CALD1-216ENST00000473714 SLC5A6Q9Y289 635 aa3.72□□□□□ -1.81
CALD1-216ENST00000473714 TMEM94Q12767 1356 aa3.72□□□□□ -1.81
CALD1-216ENST00000473714 AATKQ6ZMQ8 1374 aa3.72□□□□□ -1.81
CALD1-216ENST00000473714 PLCH2O75038 1416 aa3.71□□□□□ -1.82
CALD1-216ENST00000473714 KIF14Q15058 1648 aa3.71□□□□□ -1.82
CALD1-216ENST00000473714 AHDC1Q5TGY3 1603 aaPredicted RBP3.71□□□□□ -1.82
CALD1-216ENST00000473714 MEGF11A6BM72 1044 aa3.71□□□□□ -1.82
CALD1-216ENST00000473714 HYAL2Q12891 473 aa3.71□□□□□ -1.82
CALD1-216ENST00000473714 CCDC27Q2M243 656 aa3.71□□□□□ -1.82
CALD1-216ENST00000473714 CFAP70Q5T0N1 1121 aa3.71□□□□□ -1.82
CALD1-216ENST00000473714 NUTM2GQ5VZR2 741 aa3.71□□□□□ -1.82
CALD1-216ENST00000473714 SIAH1Q8IUQ4 282 aa3.71□□□□□ -1.82
CALD1-216ENST00000473714 SHISA5Q8N114 240 aa3.71□□□□□ -1.82
CALD1-216ENST00000473714 KRTAP9-3Q9BYQ3 159 aa3.71□□□□□ -1.82
CALD1-216ENST00000473714 SPON1Q9HCB6 807 aa3.71□□□□□ -1.82
CALD1-216ENST00000473714 SH2B1Q9NRF2 756 aaPredicted RBP3.71□□□□□ -1.82
CALD1-216ENST00000473714 CARMIL1Q5VZK9 1371 aa3.71□□□□□ -1.82
CALD1-216ENST00000473714 ZNF518AQ6AHZ1 1483 aa3.71□□□□□ -1.82
CALD1-216ENST00000473714 ARHGAP23Q9P227 1491 aa3.71□□□□□ -1.82
CALD1-216ENST00000473714 UNC13BO14795 1591 aa3.71□□□□□ -1.82
CALD1-216ENST00000473714 DIP2AQ14689 1571 aa3.71□□□□□ -1.82
CALD1-216ENST00000473714 ATRNO75882 1429 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms