RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 BAG4O95429 457 aaKnown RBP6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 PCSK2P16519 638 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 LIG1P18858 919 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 ATP4AP20648 1035 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 POU4F2Q12837 409 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 RABEP1Q15276 862 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 UVSSAQ2YD98 709 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 TEX35Q5T0J7 233 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 CAVIN1Q6NZI2 390 aaKnown RBP6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 KIF1BPQ96EK5 621 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 IQGAP1P46940 1657 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 SHPRHQ149N8 1683 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 PLEKHH1Q9ULM0 1364 aa6.09□□□□□ -1.43
TMEM39A-206ENST00000473684 PNMA6FA0A0J9YX94 578 aa6.09□□□□□ -1.44
TMEM39A-206ENST00000473684 TATP17735 454 aaPredicted RBP6.09□□□□□ -1.44
TMEM39A-206ENST00000473684 DAB2P98082 770 aa6.09□□□□□ -1.44
TMEM39A-206ENST00000473684 FAM50AQ14320 339 aaKnown RBP6.09□□□□□ -1.44
TMEM39A-206ENST00000473684 TTC31Q49AM3 519 aaPredicted RBP6.09□□□□□ -1.44
TMEM39A-206ENST00000473684 TMC4Q7Z404 712 aa6.09□□□□□ -1.44
TMEM39A-206ENST00000473684 FAM161BQ96MY7 647 aa6.09□□□□□ -1.44
TMEM39A-206ENST00000473684 TMX1Q9H3N1 280 aa6.09□□□□□ -1.44
TMEM39A-206ENST00000473684 CLTCQ00610 1675 aaKnown RBP6.08□□□□□ -1.44
TMEM39A-206ENST00000473684 FMN1Q68DA7 1419 aa6.08□□□□□ -1.44
TMEM39A-206ENST00000473684 SMTNL1A8MU46 457 aa6.08□□□□□ -1.44
TMEM39A-206ENST00000473684 ATP2B2Q01814 1243 aa6.08□□□□□ -1.44
TMEM39A-206ENST00000473684 ALG1LQ6GMV1 187 aa6.08□□□□□ -1.44
TMEM39A-206ENST00000473684 FAM184AQ8NB25 1140 aa6.08□□□□□ -1.44
TMEM39A-206ENST00000473684 HSH2DQ96JZ2 352 aa6.08□□□□□ -1.44
TMEM39A-206ENST00000473684 CSRNP1Q96S65 589 aa6.08□□□□□ -1.44
TMEM39A-206ENST00000473684 CFHR5Q9BXR6 569 aa6.08□□□□□ -1.44
TMEM39A-206ENST00000473684 ATG3Q9NT62 314 aa6.08□□□□□ -1.44
TMEM39A-206ENST00000473684 MRVI1Q9Y6F6 885 aa6.08□□□□□ -1.44
TMEM39A-206ENST00000473684 KANK1Q14678 1352 aa6.08□□□□□ -1.44
TMEM39A-206ENST00000473684 ABCC3O15438 1527 aa6.08□□□□□ -1.44
TMEM39A-206ENST00000473684 RPLP1P05386 114 aaKnown RBP6.08□□□□□ -1.44
TMEM39A-206ENST00000473684 PRICKLE2Q7Z3G6 844 aa6.08□□□□□ -1.44
TMEM39A-206ENST00000473684 NLRP13Q86W25 1043 aa6.08□□□□□ -1.44
TMEM39A-206ENST00000473684 C10orf67Q8IYJ2 551 aa6.08□□□□□ -1.44
TMEM39A-206ENST00000473684 PIK3R5Q8WYR1 880 aa6.08□□□□□ -1.44
TMEM39A-206ENST00000473684 TACO1Q9BSH4 297 aaKnown RBP6.08□□□□□ -1.44
TMEM39A-206ENST00000473684 TOMM22Q9NS69 142 aa6.08□□□□□ -1.44
TMEM39A-206ENST00000473684 UBR1Q8IWV7 1749 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 BMP2P12643 396 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 SYT10Q6XYQ8 523 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 LYSMD3Q7Z3D4 306 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 TBC1D22AQ8WUA7 517 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 DRC1Q96MC2 740 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 CEP89Q96ST8 783 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 ZNF446Q9NWS9 450 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 ANKIB1Q9P2G1 1089 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 MTUS2Q5JR59 1369 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 FYCO1Q9BQS8 1478 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 LMTK2Q8IWU2 1503 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 DIP2AQ14689 1571 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 IDH3AP50213 366 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 GPS2Q13227 327 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 ORC1Q13415 861 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 MCTP2Q6DN12 878 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 MRPL14Q6P1L8 145 aaKnown RBP6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 ZIC5Q96T25 663 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 A6NHS1 94 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 IGHDP01880 384 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 INPP5BP32019 993 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 MAP2K2P36507 400 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 MAGEA9P43362 315 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 NUCB2P80303 420 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 BMS1Q14692 1282 aaKnown RBP6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 DNAJC21Q5F1R6 531 aaKnown RBP6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 C6orf118Q5T5N4 469 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 SRLQ86TD4 932 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 ANKRD20A12PQ8NF67 263 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 PMFBP1Q8TBY8 1022 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 KIAA1524Q8TCG1 905 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 PRDM16Q9HAZ2 1276 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 PAXBP1Q9Y5B6 917 aa6.07□□□□□ -1.44
TMEM39A-206ENST00000473684 MED1Q15648 1581 aaPredicted RBP6.06□□□□□ -1.44
TMEM39A-206ENST00000473684 ANKRD30AQ9BXX3 1397 aa6.06□□□□□ -1.44
TMEM39A-206ENST00000473684 EIF1AYO14602 144 aaKnown RBP6.06□□□□□ -1.44
TMEM39A-206ENST00000473684 GYS2P54840 703 aa6.06□□□□□ -1.44
TMEM39A-206ENST00000473684 BICDL1Q6ZP65 573 aa6.06□□□□□ -1.44
TMEM39A-206ENST00000473684 LMBRD1Q9NUN5 540 aa6.06□□□□□ -1.44
TMEM39A-206ENST00000473684 V9GYY5 206 aaPredicted RBP6.06□□□□□ -1.44
TMEM39A-206ENST00000473684 A2ML1A8K2U0 1454 aa6.06□□□□□ -1.44
TMEM39A-206ENST00000473684 PLEKHG2Q9H7P9 1386 aa6.06□□□□□ -1.44
TMEM39A-206ENST00000473684 SLIT1O75093 1534 aa6.06□□□□□ -1.44
TMEM39A-206ENST00000473684 CDK13Q14004 1512 aaKnown RBP6.06□□□□□ -1.44
TMEM39A-206ENST00000473684 MPHOSPH10O00566 681 aaKnown RBP6.06□□□□□ -1.44
TMEM39A-206ENST00000473684 SCAMP3O14828 347 aaKnown RBP6.06□□□□□ -1.44
TMEM39A-206ENST00000473684 SORBS3O60504 671 aa6.06□□□□□ -1.44
TMEM39A-206ENST00000473684 MBD3O95983 291 aa6.06□□□□□ -1.44
TMEM39A-206ENST00000473684 TPM4P67936 248 aa6.06□□□□□ -1.44
TMEM39A-206ENST00000473684 XKR5Q6UX68 686 aa6.06□□□□□ -1.44
TMEM39A-206ENST00000473684 BTLAQ7Z6A9 289 aa6.06□□□□□ -1.44
TMEM39A-206ENST00000473684 FBF1Q8TES7 1133 aa6.06□□□□□ -1.44
TMEM39A-206ENST00000473684 DNAJC25Q9H1X3 360 aa6.06□□□□□ -1.44
TMEM39A-206ENST00000473684 SPHKAPQ2M3C7 1700 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 TRAPPC8Q9Y2L5 1435 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 SENP3-EIF4A1A0A087X0R7 540 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 A0A1B0GTH6 734 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms