RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 ERCC5P28715 1186 aaPredicted RBP7.02□□□□□ -1.29
HERC4-209ENST00000473533 RCAN1P53805 252 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 SART3Q15020 963 aaKnown RBP7.02□□□□□ -1.29
HERC4-209ENST00000473533 NOM1Q5C9Z4 860 aaKnown RBP7.02□□□□□ -1.29
HERC4-209ENST00000473533 TAF7LQ5H9L4 462 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 TRIM22Q8IYM9 498 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 ZNF579Q8NAF0 562 aaKnown RBP7.02□□□□□ -1.29
HERC4-209ENST00000473533 ENOX1Q8TC92 643 aaKnown RBP7.02□□□□□ -1.29
HERC4-209ENST00000473533 ZNF496Q96IT1 587 aaPredicted RBP7.02□□□□□ -1.29
HERC4-209ENST00000473533 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.02□□□□□ -1.29
HERC4-209ENST00000473533 SEMA3EO15041 775 aa7.01□□□□□ -1.29
HERC4-209ENST00000473533 XBP1P17861 261 aa7.01□□□□□ -1.29
HERC4-209ENST00000473533 IARSP41252 1262 aaKnown RBP7.01□□□□□ -1.29
HERC4-209ENST00000473533 FOXO4P98177 505 aa7.01□□□□□ -1.29
HERC4-209ENST00000473533 PPP2R3AQ06190 1150 aa7.01□□□□□ -1.29
HERC4-209ENST00000473533 NAA30Q147X3 362 aaPredicted RBP7.01□□□□□ -1.29
HERC4-209ENST00000473533 PPP2R5BQ15173 497 aa7.01□□□□□ -1.29
HERC4-209ENST00000473533 RILPL1Q5EBL4 403 aa7.01□□□□□ -1.29
HERC4-209ENST00000473533 KRBA2Q6ZNG9 492 aa7.01□□□□□ -1.29
HERC4-209ENST00000473533 ANKRD20A12PQ8NF67 263 aa7.01□□□□□ -1.29
HERC4-209ENST00000473533 EXOC4Q96A65 974 aa7.01□□□□□ -1.29
HERC4-209ENST00000473533 ZNF512BQ96KM6 892 aaPredicted RBP7.01□□□□□ -1.29
HERC4-209ENST00000473533 PANX2Q96RD6 677 aa7.01□□□□□ -1.29
HERC4-209ENST00000473533 FTOQ9C0B1 505 aaKnown RBP eCLIP7.01□□□□□ -1.29
HERC4-209ENST00000473533 NLRP2Q9NX02 1062 aa7.01□□□□□ -1.29
HERC4-209ENST00000473533 KDM6AO15550 1401 aaPredicted RBP7.01□□□□□ -1.29
HERC4-209ENST00000473533 KIF5CO60282 957 aa7.01□□□□□ -1.29
HERC4-209ENST00000473533 GNG11P61952 73 aa7.01□□□□□ -1.29
HERC4-209ENST00000473533 SSRP1Q08945 709 aaKnown RBP7.01□□□□□ -1.29
HERC4-209ENST00000473533 ATG9AQ7Z3C6 839 aa7.01□□□□□ -1.29
HERC4-209ENST00000473533 PPFIBP1Q86W92 1011 aa7.01□□□□□ -1.29
HERC4-209ENST00000473533 TMTC2Q8N394 836 aa7.01□□□□□ -1.29
HERC4-209ENST00000473533 GOLGA6L1Q8N7Z2 621 aa7.01□□□□□ -1.29
HERC4-209ENST00000473533 UTP14AQ9BVJ6 771 aaKnown RBP7.01□□□□□ -1.29
HERC4-209ENST00000473533 MYO1AQ9UBC5 1043 aa7.01□□□□□ -1.29
HERC4-209ENST00000473533 KCNH3Q9ULD8 1083 aa7.01□□□□□ -1.29
HERC4-209ENST00000473533 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.01□□□□□ -1.29
HERC4-209ENST00000473533 PRAMEF22A3QJZ6 481 aa7□□□□□ -1.29
HERC4-209ENST00000473533 BIN1O00499 593 aa7□□□□□ -1.29
HERC4-209ENST00000473533 ZBTB43O43298 467 aa7□□□□□ -1.29
HERC4-209ENST00000473533 CEBPAP49715 358 aaPredicted RBP7□□□□□ -1.29
HERC4-209ENST00000473533 MAP3K9P80192 1104 aa7□□□□□ -1.29
HERC4-209ENST00000473533 TRIM14Q14142 442 aa7□□□□□ -1.29
HERC4-209ENST00000473533 VPS37DQ86XT2 251 aa7□□□□□ -1.29
HERC4-209ENST00000473533 NFATC2IPQ8NCF5 419 aa7□□□□□ -1.29
HERC4-209ENST00000473533 HNRNPLLQ8WVV9 542 aaKnown RBP7□□□□□ -1.29
HERC4-209ENST00000473533 FBXW7Q969H0 707 aa7□□□□□ -1.29
HERC4-209ENST00000473533 CARD6Q9BX69 1037 aa7□□□□□ -1.29
HERC4-209ENST00000473533 ZKSCAN7Q9P0L1 754 aaPredicted RBP7□□□□□ -1.29
HERC4-209ENST00000473533 SETD1BQ9UPS6 1966 aaKnown RBP7□□□□□ -1.29
HERC4-209ENST00000473533 ZNF142P52746 1687 aaPredicted RBP7□□□□□ -1.29
HERC4-209ENST00000473533 ATRNO75882 1429 aa7□□□□□ -1.29
HERC4-209ENST00000473533 WDR17Q8IZU2 1322 aa7□□□□□ -1.29
HERC4-209ENST00000473533 UQCRFS1P1P0C7P4 283 aa7□□□□□ -1.29
HERC4-209ENST00000473533 CSB-PGBD3P0DP91 1061 aa7□□□□□ -1.29
HERC4-209ENST00000473533 TXLNAP40222 546 aa7□□□□□ -1.29
HERC4-209ENST00000473533 SPAG1Q07617 926 aa7□□□□□ -1.29
HERC4-209ENST00000473533 KRT40Q6A162 431 aa7□□□□□ -1.29
HERC4-209ENST00000473533 LMOD2Q6P5Q4 547 aa7□□□□□ -1.29
HERC4-209ENST00000473533 CTR9Q6PD62 1173 aa7□□□□□ -1.29
HERC4-209ENST00000473533 LEKR1Q6ZMV7 388 aa7□□□□□ -1.29
HERC4-209ENST00000473533 KRT28Q7Z3Y7 464 aa7□□□□□ -1.29
HERC4-209ENST00000473533 LRP10Q7Z4F1 713 aa7□□□□□ -1.29
HERC4-209ENST00000473533 REXO1L1PQ8IX06 675 aa7□□□□□ -1.29
HERC4-209ENST00000473533 TTF2Q9UNY4 1162 aaKnown RBP7□□□□□ -1.29
HERC4-209ENST00000473533 MRFAP1Q9Y605 127 aa7□□□□□ -1.29
HERC4-209ENST00000473533 PARP3Q9Y6F1 533 aa7□□□□□ -1.29
HERC4-209ENST00000473533 TRPM3Q9HCF6 1732 aaPredicted RBP7□□□□□ -1.29
HERC4-209ENST00000473533 LIFRP42702 1097 aa7□□□□□ -1.29
HERC4-209ENST00000473533 PIP4K2BP78356 416 aa7□□□□□ -1.29
HERC4-209ENST00000473533 FKBP4Q02790 459 aaKnown RBP eCLIP7□□□□□ -1.29
HERC4-209ENST00000473533 SLC39A6Q13433 755 aa7□□□□□ -1.29
HERC4-209ENST00000473533 TRIM65Q6PJ69 517 aa7□□□□□ -1.29
HERC4-209ENST00000473533 TMED8Q6PL24 325 aaPredicted RBP7□□□□□ -1.29
HERC4-209ENST00000473533 NFXL1Q6ZNB6 911 aa7□□□□□ -1.29
HERC4-209ENST00000473533 CNGA4Q8IV77 575 aa7□□□□□ -1.29
HERC4-209ENST00000473533 TEX13AQ9BXU3 409 aaPredicted RBP7□□□□□ -1.29
HERC4-209ENST00000473533 KRT23Q9C075 422 aa7□□□□□ -1.29
HERC4-209ENST00000473533 ZNF446Q9NWS9 450 aa7□□□□□ -1.29
HERC4-209ENST00000473533 RAI14Q9P0K7 980 aa7□□□□□ -1.29
HERC4-209ENST00000473533 PKD1L3Q7Z443 1732 aa7□□□□□ -1.29
HERC4-209ENST00000473533 ERICH2A1L162 156 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 GOLGA8AA7E2F4 631 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 AKR1B15C9JRZ8 316 aaPredicted RBP6.99□□□□□ -1.29
HERC4-209ENST00000473533 M0R2C6 588 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 DTNBO60941 627 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 FGAP02671 866 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 TBX2Q13207 712 aaPredicted RBP6.99□□□□□ -1.29
HERC4-209ENST00000473533 SMC1AQ14683 1233 aaKnown RBP6.99□□□□□ -1.29
HERC4-209ENST00000473533 UBE3CQ15386 1083 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 ALX1Q15699 326 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 HSP90B2PQ58FF3 399 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 CC2D1AQ6P1N0 951 aaPredicted RBP6.99□□□□□ -1.29
HERC4-209ENST00000473533 HDXQ7Z353 690 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 SGMS1Q86VZ5 419 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 PDILTQ8N807 584 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 GOLGA5Q8TBA6 731 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 FOXP1Q9H334 677 aaPredicted RBP6.99□□□□□ -1.29
HERC4-209ENST00000473533 NID2Q14112 1375 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 SH2B2O14492 632 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms