RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 IDI2Q9BXS1 227 aa21.58■■□□□ 1.05
RPUSD3-214ENST00000473522 RWDD1Q9H446 243 aaPredicted RBP21.58■■□□□ 1.05
RPUSD3-214ENST00000473522 ANTXR1Q9H6X2 564 aa21.58■■□□□ 1.05
RPUSD3-214ENST00000473522 WDR33Q9C0J8 1336 aaKnown RBP21.57■■□□□ 1.04
RPUSD3-214ENST00000473522 ECE1P42892 770 aa21.57■■□□□ 1.04
RPUSD3-214ENST00000473522 RHBDL3P58872 404 aa21.57■■□□□ 1.04
RPUSD3-214ENST00000473522 PPP4CP60510 307 aa21.57■■□□□ 1.04
RPUSD3-214ENST00000473522 LDLRAD1Q5T700 205 aa21.57■■□□□ 1.04
RPUSD3-214ENST00000473522 FAM151AQ8WW52 585 aa21.57■■□□□ 1.04
RPUSD3-214ENST00000473522 UNCXA6NJT0 531 aa21.56■■□□□ 1.04
RPUSD3-214ENST00000473522 BTDP43251 543 aa21.56■■□□□ 1.04
RPUSD3-214ENST00000473522 TTF1Q15361 905 aaPredicted RBP21.56■■□□□ 1.04
RPUSD3-214ENST00000473522 CYP4F22Q6NT55 531 aa21.56■■□□□ 1.04
RPUSD3-214ENST00000473522 RGMBQ6NW40 437 aa21.56■■□□□ 1.04
RPUSD3-214ENST00000473522 MOB2Q70IA6 237 aa21.56■■□□□ 1.04
RPUSD3-214ENST00000473522 CAPNS2Q96L46 248 aa21.56■■□□□ 1.04
RPUSD3-214ENST00000473522 TMEM39BQ9GZU3 492 aa21.56■■□□□ 1.04
RPUSD3-214ENST00000473522 ECHDC1Q9NTX5 307 aa21.56■■□□□ 1.04
RPUSD3-214ENST00000473522 FAM198AQ9UFP1 575 aa21.56■■□□□ 1.04
RPUSD3-214ENST00000473522 NDUFB9Q9Y6M9 179 aa21.56■■□□□ 1.04
RPUSD3-214ENST00000473522 UBE2Q2LH0YL09 131 aa21.55■■□□□ 1.04
RPUSD3-214ENST00000473522 PPP1R12BO60237 982 aaPredicted RBP21.55■■□□□ 1.04
RPUSD3-214ENST00000473522 NPM3O75607 178 aaKnown RBP21.55■■□□□ 1.04
RPUSD3-214ENST00000473522 NFIAQ12857 509 aa21.55■■□□□ 1.04
RPUSD3-214ENST00000473522 NAA16Q6N069 864 aaPredicted RBP21.55■■□□□ 1.04
RPUSD3-214ENST00000473522 ARMC9Q7Z3E5 817 aa21.55■■□□□ 1.04
RPUSD3-214ENST00000473522 CCDC102AQ96A19 550 aa21.55■■□□□ 1.04
RPUSD3-214ENST00000473522 HAUS7Q99871 368 aa21.55■■□□□ 1.04
RPUSD3-214ENST00000473522 ENTPD3O75355 529 aa21.54■■□□□ 1.04
RPUSD3-214ENST00000473522 USP2O75604 605 aaPredicted RBP21.54■■□□□ 1.04
RPUSD3-214ENST00000473522 WDHD1O75717 1129 aaPredicted RBP21.54■■□□□ 1.04
RPUSD3-214ENST00000473522 IGHDP01880 384 aa21.54■■□□□ 1.04
RPUSD3-214ENST00000473522 MAP2K2P36507 400 aa21.54■■□□□ 1.04
RPUSD3-214ENST00000473522 CDAN1Q8IWY9 1227 aa21.54■■□□□ 1.04
RPUSD3-214ENST00000473522 SMC5Q8IY18 1101 aa21.54■■□□□ 1.04
RPUSD3-214ENST00000473522 BCL11AQ9H165 835 aa21.54■■□□□ 1.04
RPUSD3-214ENST00000473522 BOLA2Q9H3K6 86 aa21.54■■□□□ 1.04
RPUSD3-214ENST00000473522 FAM155AB1AL88 458 aaPredicted RBP21.53■■□□□ 1.04
RPUSD3-214ENST00000473522 MAP3K12Q12852 859 aa21.53■■□□□ 1.04
RPUSD3-214ENST00000473522 ANKRD45Q5TZF3 282 aa21.53■■□□□ 1.04
RPUSD3-214ENST00000473522 IDH1O75874 414 aaKnown RBP21.52■■□□□ 1.04
RPUSD3-214ENST00000473522 BAG3O95817 575 aa21.52■■□□□ 1.04
RPUSD3-214ENST00000473522 ZNF157P51786 506 aaPredicted RBP21.52■■□□□ 1.04
RPUSD3-214ENST00000473522 ADGRA1Q86SQ6 560 aa21.52■■□□□ 1.04
RPUSD3-214ENST00000473522 ZFPM1Q8IX07 1006 aa21.52■■□□□ 1.04
RPUSD3-214ENST00000473522 ANGEL1Q9UNK9 670 aaKnown RBP21.52■■□□□ 1.04
RPUSD3-214ENST00000473522 GOLIM4O00461 696 aa21.51■■□□□ 1.03
RPUSD3-214ENST00000473522 PRKG1Q13976 671 aa21.51■■□□□ 1.03
RPUSD3-214ENST00000473522 TTLL12Q14166 644 aaPredicted RBP21.51■■□□□ 1.03
RPUSD3-214ENST00000473522 HOOK2Q96ED9 719 aa21.51■■□□□ 1.03
RPUSD3-214ENST00000473522 PAG1Q9NWQ8 432 aa21.51■■□□□ 1.03
RPUSD3-214ENST00000473522 RPAP1Q9BWH6 1393 aaPredicted RBP21.5■■□□□ 1.03
RPUSD3-214ENST00000473522 SSC5DA1L4H1 1573 aa21.5■■□□□ 1.03
RPUSD3-214ENST00000473522 CYP7A1P22680 504 aa21.5■■□□□ 1.03
RPUSD3-214ENST00000473522 RGS3P49796 1198 aa21.5■■□□□ 1.03
RPUSD3-214ENST00000473522 TCP10Q12799 353 aa21.5■■□□□ 1.03
RPUSD3-214ENST00000473522 PAXIP1Q6ZW49 1069 aaPredicted RBP21.5■■□□□ 1.03
RPUSD3-214ENST00000473522 DNAJC2Q99543 621 aaKnown RBP21.5■■□□□ 1.03
RPUSD3-214ENST00000473522 DDX4Q9NQI0 724 aaKnown RBP21.5■■□□□ 1.03
RPUSD3-214ENST00000473522 FZD1Q9UP38 647 aa21.5■■□□□ 1.03
RPUSD3-214ENST00000473522 TTC41PQ6P2S7 1318 aa21.5■■□□□ 1.03
RPUSD3-214ENST00000473522 RFX7Q2KHR2 1363 aa21.49■■□□□ 1.03
RPUSD3-214ENST00000473522 POLR2AP24928 1970 aaKnown RBP21.49■■□□□ 1.03
RPUSD3-214ENST00000473522 SLC10A3P09131 477 aa21.49■■□□□ 1.03
RPUSD3-214ENST00000473522 PLCG2P16885 1265 aa21.49■■□□□ 1.03
RPUSD3-214ENST00000473522 IREB2P48200 963 aaKnown RBP21.49■■□□□ 1.03
RPUSD3-214ENST00000473522 IRX6P78412 446 aaPredicted RBP21.49■■□□□ 1.03
RPUSD3-214ENST00000473522 MAP3K10Q02779 954 aa21.49■■□□□ 1.03
RPUSD3-214ENST00000473522 NOGQ13253 232 aa21.49■■□□□ 1.03
RPUSD3-214ENST00000473522 MAGEB6Q8N7X4 407 aa21.49■■□□□ 1.03
RPUSD3-214ENST00000473522 EDC3Q96F86 508 aaKnown RBP21.49■■□□□ 1.03
RPUSD3-214ENST00000473522 GPATCH3Q96I76 525 aa21.49■■□□□ 1.03
RPUSD3-214ENST00000473522 SALL3Q9BXA9 1300 aa21.49■■□□□ 1.03
RPUSD3-214ENST00000473522 AOC2O75106 756 aa21.48■■□□□ 1.03
RPUSD3-214ENST00000473522 SLC9C2Q5TAH2 1124 aa21.48■■□□□ 1.03
RPUSD3-214ENST00000473522 SH3BP5LQ7L8J4 393 aa21.48■■□□□ 1.03
RPUSD3-214ENST00000473522 CERS3Q8IU89 383 aa21.48■■□□□ 1.03
RPUSD3-214ENST00000473522 OTUD7AQ8TE49 926 aaPredicted RBP21.48■■□□□ 1.03
RPUSD3-214ENST00000473522 NOL10Q9BSC4 688 aaKnown RBP21.48■■□□□ 1.03
RPUSD3-214ENST00000473522 WBP1LQ9NX94 342 aa21.48■■□□□ 1.03
RPUSD3-214ENST00000473522 AATFQ9NY61 560 aaKnown RBP eCLIP21.48■■□□□ 1.03
RPUSD3-214ENST00000473522 RASAL3Q86YV0 1011 aa21.47■■□□□ 1.03
RPUSD3-214ENST00000473522 ANKRD13AQ8IZ07 590 aa21.47■■□□□ 1.03
RPUSD3-214ENST00000473522 SH3RF3Q8TEJ3 882 aaPredicted RBP21.47■■□□□ 1.03
RPUSD3-214ENST00000473522 ZBTB47Q9UFB7 747 aaPredicted RBP21.47■■□□□ 1.03
RPUSD3-214ENST00000473522 STAP2Q9UGK3 403 aa21.47■■□□□ 1.03
RPUSD3-214ENST00000473522 TCRBV5S4A2TA0A5A2 114 aa21.46■■□□□ 1.03
RPUSD3-214ENST00000473522 PDE6AP16499 860 aa21.46■■□□□ 1.03
RPUSD3-214ENST00000473522 MAP3K9P80192 1104 aa21.46■■□□□ 1.03
RPUSD3-214ENST00000473522 MAP2K1Q02750 393 aaPredicted RBP21.46■■□□□ 1.03
RPUSD3-214ENST00000473522 GRM1Q13255 1194 aa21.46■■□□□ 1.03
RPUSD3-214ENST00000473522 TEX11Q8IYF3 940 aa21.46■■□□□ 1.03
RPUSD3-214ENST00000473522 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.46■■□□□ 1.03
RPUSD3-214ENST00000473522 PI4K2BQ8TCG2 481 aa21.46■■□□□ 1.03
RPUSD3-214ENST00000473522 SLC10A4Q96EP9 437 aa21.46■■□□□ 1.03
RPUSD3-214ENST00000473522 ZIC5Q96T25 663 aa21.46■■□□□ 1.03
RPUSD3-214ENST00000473522 ZNF112Q9UJU3 913 aa21.46■■□□□ 1.03
RPUSD3-214ENST00000473522 TRPM7Q96QT4 1865 aa21.45■■□□□ 1.02
RPUSD3-214ENST00000473522 AKAP11Q9UKA4 1901 aa21.45■■□□□ 1.02
RPUSD3-214ENST00000473522 ERC2O15083 957 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms