RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 PTPREP23469 700 aa8.01□□□□□ -1.13
HDAC1-205ENST00000472928 PDE3AQ14432 1141 aa8.01□□□□□ -1.13
HDAC1-205ENST00000472928 CCDC30Q5VVM6 783 aa8.01□□□□□ -1.13
HDAC1-205ENST00000472928 ATF7IPQ6VMQ6 1270 aa8.01□□□□□ -1.13
HDAC1-205ENST00000472928 DZIP1LQ8IYY4 767 aaKnown RBP8.01□□□□□ -1.13
HDAC1-205ENST00000472928 CLUAP1Q96AJ1 413 aa8.01□□□□□ -1.13
HDAC1-205ENST00000472928 SEC31BQ9NQW1 1179 aa8.01□□□□□ -1.13
HDAC1-205ENST00000472928 GGA1Q9UJY5 639 aa8.01□□□□□ -1.13
HDAC1-205ENST00000472928 USP17L3A6NCW0 530 aa8□□□□□ -1.13
HDAC1-205ENST00000472928 USP17L4A6NCW7 530 aa8□□□□□ -1.13
HDAC1-205ENST00000472928 RCCD1A6NED2 376 aa8□□□□□ -1.13
HDAC1-205ENST00000472928 ATP5J2-PTCD1G3V325 749 aa8□□□□□ -1.13
HDAC1-205ENST00000472928 IGF2BP3O00425 579 aaKnown RBP eCLIP8□□□□□ -1.13
HDAC1-205ENST00000472928 WNT10BO00744 389 aa8□□□□□ -1.13
HDAC1-205ENST00000472928 IRS4O14654 1257 aaPredicted RBP8□□□□□ -1.13
HDAC1-205ENST00000472928 ALDH1A1P00352 501 aa8□□□□□ -1.13
HDAC1-205ENST00000472928 RTL5Q5HYW3 569 aaPredicted RBP8□□□□□ -1.13
HDAC1-205ENST00000472928 USP17L1Q7RTZ2 530 aa8□□□□□ -1.13
HDAC1-205ENST00000472928 ITPRIPQ8IWB1 547 aa8□□□□□ -1.13
HDAC1-205ENST00000472928 PLBD2Q8NHP8 589 aa8□□□□□ -1.13
HDAC1-205ENST00000472928 MXD3Q9BW11 206 aa8□□□□□ -1.13
HDAC1-205ENST00000472928 ANKIB1Q9P2G1 1089 aa8□□□□□ -1.13
HDAC1-205ENST00000472928 FZD1Q9UP38 647 aa8□□□□□ -1.13
HDAC1-205ENST00000472928 PTPN22Q9Y2R2 807 aa8□□□□□ -1.13
HDAC1-205ENST00000472928 COG6Q9Y2V7 657 aa8□□□□□ -1.13
HDAC1-205ENST00000472928 ZNF646O15015 1829 aaPredicted RBP7.99□□□□□ -1.13
HDAC1-205ENST00000472928 SSC5DA1L4H1 1573 aa7.99□□□□□ -1.13
HDAC1-205ENST00000472928 WTIPA6NIX2 430 aaPredicted RBP7.99□□□□□ -1.13
HDAC1-205ENST00000472928 C3orf80F5H4A9 247 aa7.99□□□□□ -1.13
HDAC1-205ENST00000472928 TRIM28Q13263 835 aaKnown RBP7.99□□□□□ -1.13
HDAC1-205ENST00000472928 PRKG1Q13976 671 aa7.99□□□□□ -1.13
HDAC1-205ENST00000472928 MVPQ14764 893 aaKnown RBP7.99□□□□□ -1.13
HDAC1-205ENST00000472928 DACT2Q5SW24 774 aa7.99□□□□□ -1.13
HDAC1-205ENST00000472928 MYSM1Q5VVJ2 828 aa7.99□□□□□ -1.13
HDAC1-205ENST00000472928 B4GALNT3Q6L9W6 998 aa7.99□□□□□ -1.13
HDAC1-205ENST00000472928 CD99L2Q8TCZ2 262 aa7.99□□□□□ -1.13
HDAC1-205ENST00000472928 OTUD5Q96G74 571 aa7.99□□□□□ -1.13
HDAC1-205ENST00000472928 ZBED3Q96IU2 234 aaPredicted RBP7.99□□□□□ -1.13
HDAC1-205ENST00000472928 ZNF333Q96JL9 665 aa7.99□□□□□ -1.13
HDAC1-205ENST00000472928 API5Q9BZZ5 524 aaKnown RBP7.99□□□□□ -1.13
HDAC1-205ENST00000472928 CHPF2Q9P2E5 772 aa7.99□□□□□ -1.13
HDAC1-205ENST00000472928 PTPRCP08575 1304 aa7.99□□□□□ -1.13
HDAC1-205ENST00000472928 XDHP47989 1333 aa7.99□□□□□ -1.13
HDAC1-205ENST00000472928 MANSC4A6NHS7 340 aaPredicted RBP7.98□□□□□ -1.13
HDAC1-205ENST00000472928 TRIM6-TRIM34B2RNG4 842 aa7.98□□□□□ -1.13
HDAC1-205ENST00000472928 H0YGN5 161 aa7.98□□□□□ -1.13
HDAC1-205ENST00000472928 SASH1O94885 1247 aa7.98□□□□□ -1.13
HDAC1-205ENST00000472928 NF2P35240 595 aa7.98□□□□□ -1.13
HDAC1-205ENST00000472928 CRHR2Q13324 411 aa7.98□□□□□ -1.13
HDAC1-205ENST00000472928 ANKRD13DQ6ZTN6 518 aa7.98□□□□□ -1.13
HDAC1-205ENST00000472928 G2E3Q7L622 706 aa7.98□□□□□ -1.13
HDAC1-205ENST00000472928 ARMC9Q7Z3E5 817 aa7.98□□□□□ -1.13
HDAC1-205ENST00000472928 PODNQ7Z5L7 613 aa7.98□□□□□ -1.13
HDAC1-205ENST00000472928 TMEM57Q8N5G2 664 aa7.98□□□□□ -1.13
HDAC1-205ENST00000472928 PROCA1Q8NCQ7 364 aaPredicted RBP7.98□□□□□ -1.13
HDAC1-205ENST00000472928 ARHGAP45Q92619 1136 aa7.98□□□□□ -1.13
HDAC1-205ENST00000472928 ERO1AQ96HE7 468 aa7.98□□□□□ -1.13
HDAC1-205ENST00000472928 CCDC136Q96JN2 1154 aa7.98□□□□□ -1.13
HDAC1-205ENST00000472928 CLMNQ96JQ2 1002 aa7.98□□□□□ -1.13
HDAC1-205ENST00000472928 CHMP4AQ9BY43 222 aa7.98□□□□□ -1.13
HDAC1-205ENST00000472928 POLR3EQ9NVU0 708 aa7.98□□□□□ -1.13
HDAC1-205ENST00000472928 ANGEL1Q9UNK9 670 aaKnown RBP7.98□□□□□ -1.13
HDAC1-205ENST00000472928 MYH3P11055 1940 aa7.97□□□□□ -1.13
HDAC1-205ENST00000472928 TTC28Q96AY4 2481 aa7.97□□□□□ -1.13
HDAC1-205ENST00000472928 DLL1O00548 723 aa7.97□□□□□ -1.13
HDAC1-205ENST00000472928 ZBTB48P10074 688 aaPredicted RBP7.97□□□□□ -1.13
HDAC1-205ENST00000472928 ATP2B4P23634 1241 aa7.97□□□□□ -1.13
HDAC1-205ENST00000472928 GJA5P36382 358 aa7.97□□□□□ -1.13
HDAC1-205ENST00000472928 INHBEP58166 350 aa7.97□□□□□ -1.13
HDAC1-205ENST00000472928 FKBP5Q13451 457 aaPredicted RBP7.97□□□□□ -1.13
HDAC1-205ENST00000472928 MAP3K11Q16584 847 aa7.97□□□□□ -1.13
HDAC1-205ENST00000472928 NUDT18Q6ZVK8 323 aa7.97□□□□□ -1.13
HDAC1-205ENST00000472928 ZBTB38Q8NAP3 1195 aaPredicted RBP7.97□□□□□ -1.13
HDAC1-205ENST00000472928 WNK4Q96J92 1243 aa7.97□□□□□ -1.13
HDAC1-205ENST00000472928 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.97□□□□□ -1.13
HDAC1-205ENST00000472928 TBC1D2Q9BYX2 928 aa7.97□□□□□ -1.13
HDAC1-205ENST00000472928 EFCC1Q9HA90 598 aa7.97□□□□□ -1.13
HDAC1-205ENST00000472928 LAMB1P07942 1786 aa7.97□□□□□ -1.13
HDAC1-205ENST00000472928 MED23Q9ULK4 1368 aa7.97□□□□□ -1.13
HDAC1-205ENST00000472928 CD46P15529 392 aa7.96□□□□□ -1.14
HDAC1-205ENST00000472928 DNAJB2P25686 324 aa7.96□□□□□ -1.14
HDAC1-205ENST00000472928 CLK2P49760 499 aaKnown RBP7.96□□□□□ -1.14
HDAC1-205ENST00000472928 STRIP1Q5VSL9 837 aa7.96□□□□□ -1.14
HDAC1-205ENST00000472928 APOBEC3FQ8IUX4 373 aaKnown RBP7.96□□□□□ -1.14
HDAC1-205ENST00000472928 TATDN2Q93075 761 aa7.96□□□□□ -1.14
HDAC1-205ENST00000472928 SLC10A4Q96EP9 437 aa7.96□□□□□ -1.14
HDAC1-205ENST00000472928 CCDC85AQ96PX6 553 aaPredicted RBP7.96□□□□□ -1.14
HDAC1-205ENST00000472928 PTPN18Q99952 460 aa7.96□□□□□ -1.14
HDAC1-205ENST00000472928 DDX19BQ9UMR2 479 aa7.96□□□□□ -1.14
HDAC1-205ENST00000472928 PTCH2Q9Y6C5 1203 aa7.96□□□□□ -1.14
HDAC1-205ENST00000472928 COL1A1P02452 1464 aaPredicted RBP7.95□□□□□ -1.14
HDAC1-205ENST00000472928 F6X3S4 739 aa7.95□□□□□ -1.14
HDAC1-205ENST00000472928 SP3Q02447 781 aa7.95□□□□□ -1.14
HDAC1-205ENST00000472928 MCM6Q14566 821 aa7.95□□□□□ -1.14
HDAC1-205ENST00000472928 DIXDC1Q155Q3 683 aa7.95□□□□□ -1.14
HDAC1-205ENST00000472928 CCDC152Q4G0S7 254 aa7.95□□□□□ -1.14
HDAC1-205ENST00000472928 PACS2Q86VP3 889 aa7.95□□□□□ -1.14
HDAC1-205ENST00000472928 TXNRD3Q86VQ6 643 aa7.95□□□□□ -1.14
HDAC1-205ENST00000472928 OGFOD1Q8N543 542 aa7.95□□□□□ -1.14
HDAC1-205ENST00000472928 JARID2Q92833 1246 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms