RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 TRIM34Q9BYJ4 488 aa11.83□□□□□ -0.52
APTX-216ENST00000472896 TAF1P21675 1872 aa11.83□□□□□ -0.52
APTX-216ENST00000472896 HMMRO75330 724 aa11.82□□□□□ -0.52
APTX-216ENST00000472896 CAVIN2O95810 425 aa11.82□□□□□ -0.52
APTX-216ENST00000472896 F13A1P00488 732 aa11.82□□□□□ -0.52
APTX-216ENST00000472896 ANXA1P04083 346 aa11.82□□□□□ -0.52
APTX-216ENST00000472896 TUBB4AP04350 444 aa11.82□□□□□ -0.52
APTX-216ENST00000472896 PROSER3Q2NL68 480 aa11.82□□□□□ -0.52
APTX-216ENST00000472896 GIMAP6Q6P9H5 292 aa11.82□□□□□ -0.52
APTX-216ENST00000472896 CTU1Q7Z7A3 348 aaKnown RBP11.82□□□□□ -0.52
APTX-216ENST00000472896 PLA2G4DQ86XP0 818 aa11.82□□□□□ -0.52
APTX-216ENST00000472896 ASTN2O75129 1339 aaPredicted RBP11.82□□□□□ -0.52
APTX-216ENST00000472896 SLU7O95391 586 aaKnown RBP11.82□□□□□ -0.52
APTX-216ENST00000472896 ZNF75DP51815 510 aa11.82□□□□□ -0.52
APTX-216ENST00000472896 CEP85Q6P2H3 762 aa11.82□□□□□ -0.52
APTX-216ENST00000472896 DBNDD1Q9H9R9 158 aa11.82□□□□□ -0.52
APTX-216ENST00000472896 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.82□□□□□ -0.52
APTX-216ENST00000472896 HPS5Q9UPZ3 1129 aa11.82□□□□□ -0.52
APTX-216ENST00000472896 ERICH4A6NGS2 130 aa11.81□□□□□ -0.52
APTX-216ENST00000472896 RIMBP2O15034 1052 aa11.81□□□□□ -0.52
APTX-216ENST00000472896 ATP8B1O43520 1251 aa11.81□□□□□ -0.52
APTX-216ENST00000472896 STX6O43752 255 aa11.81□□□□□ -0.52
APTX-216ENST00000472896 SLC10A3P09131 477 aa11.81□□□□□ -0.52
APTX-216ENST00000472896 ZNF853P0CG23 659 aa11.81□□□□□ -0.52
APTX-216ENST00000472896 HNRNPH2P55795 449 aaKnown RBP11.81□□□□□ -0.52
APTX-216ENST00000472896 TPM4P67936 248 aa11.81□□□□□ -0.52
APTX-216ENST00000472896 GRAPQ13588 217 aa11.81□□□□□ -0.52
APTX-216ENST00000472896 DRC7Q8IY82 874 aa11.81□□□□□ -0.52
APTX-216ENST00000472896 TDRD7Q8NHU6 1098 aaKnown RBP11.81□□□□□ -0.52
APTX-216ENST00000472896 GRAPLQ8TC17 118 aaPredicted RBP11.81□□□□□ -0.52
APTX-216ENST00000472896 PDE1AP54750 535 aa11.8□□□□□ -0.52
APTX-216ENST00000472896 LMOD3Q0VAK6 560 aa11.8□□□□□ -0.52
APTX-216ENST00000472896 PTPN14Q15678 1187 aa11.8□□□□□ -0.52
APTX-216ENST00000472896 NFE2L2Q16236 605 aa11.8□□□□□ -0.52
APTX-216ENST00000472896 MAP3K11Q16584 847 aa11.8□□□□□ -0.52
APTX-216ENST00000472896 DDX46Q7L014 1031 aaKnown RBP11.8□□□□□ -0.52
APTX-216ENST00000472896 NLRP10Q86W26 655 aa11.8□□□□□ -0.52
APTX-216ENST00000472896 DCPSQ96C86 337 aaKnown RBP11.8□□□□□ -0.52
APTX-216ENST00000472896 GEMIN8Q9NWZ8 242 aaKnown RBP11.8□□□□□ -0.52
APTX-216ENST00000472896 LAMB2P55268 1798 aa11.8□□□□□ -0.52
APTX-216ENST00000472896 KDM3BQ7LBC6 1761 aa11.8□□□□□ -0.52
APTX-216ENST00000472896 ELP1O95163 1332 aa11.8□□□□□ -0.52
APTX-216ENST00000472896 DUOX1Q9NRD9 1551 aa11.8□□□□□ -0.52
APTX-216ENST00000472896 H2AFXP16104 143 aaPredicted RBP11.79□□□□□ -0.52
APTX-216ENST00000472896 EIF2S2P20042 333 aaKnown RBP11.79□□□□□ -0.52
APTX-216ENST00000472896 DOK7Q18PE1 504 aa11.79□□□□□ -0.52
APTX-216ENST00000472896 TWISTNBQ3B726 338 aaPredicted RBP11.79□□□□□ -0.52
APTX-216ENST00000472896 FBXO38Q6PIJ6 1188 aa11.79□□□□□ -0.52
APTX-216ENST00000472896 NYAP1Q6ZVC0 841 aa11.79□□□□□ -0.52
APTX-216ENST00000472896 OTUD7AQ8TE49 926 aaPredicted RBP11.79□□□□□ -0.52
APTX-216ENST00000472896 RASSF4Q9H2L5 321 aa11.79□□□□□ -0.52
APTX-216ENST00000472896 POLLQ9UGP5 575 aa11.79□□□□□ -0.52
APTX-216ENST00000472896 AKAP11Q9UKA4 1901 aa11.79□□□□□ -0.52
APTX-216ENST00000472896 RTL9Q8NET4 1388 aa11.79□□□□□ -0.52
APTX-216ENST00000472896 TNNT3P45378 269 aaPredicted RBP11.79□□□□□ -0.52
APTX-216ENST00000472896 TYRO3Q06418 890 aa11.79□□□□□ -0.52
APTX-216ENST00000472896 RAD51AP2Q09MP3 1159 aa11.79□□□□□ -0.52
APTX-216ENST00000472896 WASHC4Q2M389 1173 aa11.79□□□□□ -0.52
APTX-216ENST00000472896 RGS22Q8NE09 1264 aa11.79□□□□□ -0.52
APTX-216ENST00000472896 CWC15Q9P013 229 aaKnown RBP11.79□□□□□ -0.52
APTX-216ENST00000472896 ZNF215Q9UL58 517 aaPredicted RBP11.79□□□□□ -0.52
APTX-216ENST00000472896 MRVI1Q9Y6F6 885 aa11.79□□□□□ -0.52
APTX-216ENST00000472896 V9GYY5 206 aaPredicted RBP11.79□□□□□ -0.52
APTX-216ENST00000472896 GPSM2P81274 684 aa11.78□□□□□ -0.52
APTX-216ENST00000472896 GPS2Q13227 327 aa11.78□□□□□ -0.52
APTX-216ENST00000472896 NAA30Q147X3 362 aaPredicted RBP11.78□□□□□ -0.52
APTX-216ENST00000472896 COPS6Q7L5N1 327 aa11.78□□□□□ -0.52
APTX-216ENST00000472896 RASAL3Q86YV0 1011 aa11.78□□□□□ -0.52
APTX-216ENST00000472896 CELF1Q92879 486 aaKnown RBP11.78□□□□□ -0.52
APTX-216ENST00000472896 CDCA5Q96FF9 252 aa11.78□□□□□ -0.52
APTX-216ENST00000472896 TRIM5Q9C035 493 aa11.78□□□□□ -0.52
APTX-216ENST00000472896 NUP62CLQ9H1M0 184 aa11.78□□□□□ -0.52
APTX-216ENST00000472896 TRMT112Q9UI30 125 aaKnown RBP11.78□□□□□ -0.52
APTX-216ENST00000472896 SMC3Q9UQE7 1217 aa11.78□□□□□ -0.52
APTX-216ENST00000472896 RAD50Q92878 1312 aa11.78□□□□□ -0.52
APTX-216ENST00000472896 DLG5Q8TDM6 1919 aa11.78□□□□□ -0.52
APTX-216ENST00000472896 ANKRD36CQ5JPF3 1778 aa11.77□□□□□ -0.52
APTX-216ENST00000472896 FIBPO43427 364 aa11.77□□□□□ -0.52
APTX-216ENST00000472896 TBC1D8O95759 1140 aa11.77□□□□□ -0.52
APTX-216ENST00000472896 SYT1P21579 422 aa11.77□□□□□ -0.52
APTX-216ENST00000472896 CHMLP26374 656 aa11.77□□□□□ -0.52
APTX-216ENST00000472896 HSPA4P34932 840 aa11.77□□□□□ -0.52
APTX-216ENST00000472896 AIMP1Q12904 312 aaKnown RBP11.77□□□□□ -0.52
APTX-216ENST00000472896 TCIRG1Q13488 830 aa11.77□□□□□ -0.52
APTX-216ENST00000472896 DHX8Q14562 1220 aaKnown RBP11.77□□□□□ -0.52
APTX-216ENST00000472896 KIF4BQ2VIQ3 1234 aa11.77□□□□□ -0.52
APTX-216ENST00000472896 SARM1Q6SZW1 724 aa11.77□□□□□ -0.52
APTX-216ENST00000472896 MOB2Q70IA6 237 aa11.77□□□□□ -0.52
APTX-216ENST00000472896 ARGLU1Q9NWB6 273 aaPredicted RBP11.77□□□□□ -0.52
APTX-216ENST00000472896 GGA3Q9NZ52 723 aa11.77□□□□□ -0.52
APTX-216ENST00000472896 AOX1Q06278 1338 aa11.77□□□□□ -0.53
APTX-216ENST00000472896 COL4A1P02462 1669 aa11.77□□□□□ -0.53
APTX-216ENST00000472896 C6orf229H3BNL8 230 aa11.77□□□□□ -0.53
APTX-216ENST00000472896 ECE2O60344 883 aa11.77□□□□□ -0.53
APTX-216ENST00000472896 RPS12P25398 132 aaKnown RBP11.77□□□□□ -0.53
APTX-216ENST00000472896 BRD2P25440 801 aaKnown RBP11.77□□□□□ -0.53
APTX-216ENST00000472896 LRMPQ12912 555 aa11.77□□□□□ -0.53
APTX-216ENST00000472896 ELF2Q15723 593 aa11.77□□□□□ -0.53
APTX-216ENST00000472896 FOXD4L6Q3SYB3 417 aaPredicted RBP11.77□□□□□ -0.53
APTX-216ENST00000472896 FOXD4L3Q6VB84 417 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms